Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------At4g35610                               --------->AHL20(1)                                                  <-                               --------->AHL20(2)                                                  --                               <---------AHL20(1)                                                  --                               <---------AHL20(2) <---------TOE2(3)                                <-       <---------AtLEC2       --------->AHL20(2)  <---------TOE2(2)                               --- --------ARR11(3)    ----------->GT1 <-----------GT1                                              --- ------->ARR11(3)>>>>>>>>>TBF1<---------AHL20(2)  <---------TOE1(2)                ------->TEIL -----   agataatgtgaatggagaagaagaagtaaaaaataaattttagcttctatccaaggtttgagagtttatgcattcttttgaaatgaatcaagagccaaga  8419400      -------->HAHB4      <---------ICU4      --------->YAB1     --------->ICU4  <---------AHL20(2)  <---------AHL20(1)  --------->AHL20(1)  --------->AHL20(2)                                                --------->ANAC58 -------HAHB4                  --------->AtMYB61                    --------->ANAC58 ------->YAB1          <---------YAB1                        ---------->DOF2           --------->ANAC58 ------->ATHB51     <---------YAB1                         <---------YAB1              --------->ANAC58 --------ICU4   <---------ANAC58             <---------ANAC55(2)  ---------->DOF2    --------->MYB52(1) ------>ICU4    --------------------->WRI1 <---------ICU4<---------ICU4           --------->ANAC58 ------>AHL20(2)<---------ANAC46          --------->ICU4 --------->YAB1           --------->ANAC46 ---->YAB1      <---------ANAC58        --------->YAB1  --------->ICU4            --------->ANAC58   ataattaattatgctcttccttgttattatcgaccaatagagtcatcatgtgtctgccataatgaaagtaaagcaagttccaagacgaaacgaaattgaa  8419500                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                     ---------->DOF2                                     --------->ANAC58               --------->YAB1                         --------->At4g35610     --------->MYB52(2)<---------ATHB12                         <---------At4g35610   <--------P        --------->WOX13(1)                 -                  <-----------GT1    --------->ANAC58     ---------->DOF2 <-----------HVH21       ---   tgcgatttctctctaacaaatcacctcatctcaattctcaagcccatgggttagtctcatcaaagcccaatcaaagcgtcaatgcttcccaagaacaaaa  8419600                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                              --------->CCA1(2)                                             <---------ARR14(3)                                             <---------AGP1                                             --------->ARR11(3)                                             <---------ARR11(3)                                             --------->ARR14(2)                                             --------->ARR14(3)         <---------TOE2(3)                   <-----------ARR10     --------->ANAC58   <---------ARR11(3)                        <---------ARR14(2)    --------->ANAC58                 -   --------->ARR11(3)                        --------->AGP1     <---------REM1(2)                  <-   <---------AHL20(2)                      ----------->ARR10    <---------ZAT14         <---------YAB1   --------->AHL20(2)                    ---------->DOF2      --------->ANAC46          <---------AHL20(2)   <---------AHL20(1)                   =============HOX2a_HOX2a--------->ZAT14        --------->AHL20(1)   --------->AHL20(1)                   ==============HOX2a_HOX2a  --------->ANAC46    --------->AHL20(2)  --------->AHL20(2)                    <------ZmHOX2a(1)   --------->ZAT6             <---------AHL20(1) -------->AHL20(2)             --------------->AGL15      ----------->RAV1(1)        ------->TEIL  -- ------>AHL20(2)--------->MYB46(3)---------->DOF2        --------->REM1(1)    <------ZmHOX2a(2)  ----   aaaaatatattaagatgaacaaacaaaaaaacacttaaaagaggaaagatctggccactacaacactacacgatagtacgatcgatgaatataatcggaa  8419700                                 <---------O2                                 --------->O2                                 <---------bZIP60(1)                         <----------DOF2                        <---------ANAC46          ------------>CBF    --------->ANAC46                                                *TSS  <    <---------ANAC58    <---------ANAC58                       <---------ICU4                 =======    <---------ANAC58    <---------ANAC58                  <---------MYB52(1)             ----------->GT1 -------->CCA1(2)   <------------CBF                     --------->TOE2(3)           --------->ANAC58 --------ARR11(3)<---------ANAC55(2)               --------->ATHB12                  --------->ANAC58 ------->ARR11(1)--------->ANAC55(2)               <---------ICU4  <---------TOE2(3) --------->ANAC46 ------->ARR10 --------->AHL20(2)--------->bZIP60(1)    ----------->GT1  <------ZmHOX2a(1)    -------   agatttgagtggctcaattacatattgcttatacgacgtcgttttgagtagcatcatttcgttaatatttatgtaggagactgaaacaagacagagaaaa  8419800                               ===================================================bZIP_DOF                 ---------->DOF2       --------->HSFB2a(2)     <---------O2                    <------NtERF2       --------->LBD16         <---------ANAC46               --------->LBD16  <---------HSFB2a(1)          --------->O2                  --------->ANAC46  <---------GLK1(1)            --------->TGA1a               --------->ANAC58 --------->TGA1a --------->GLK1(2)             <---------TGA1a               --------->ANAC58 --------->O2 <-----------ARR10            <------NtERF2                 <---------LBD16   ======================= <---------ARR14(2)           --------->ATERF1(1)       --------->MYB46(3)    <---------O2 --------->ARR14(2)          <---------ATERF1(1)   <---------HSFB2a(2)        <---------TGA1a ---------GLK1(2)========================bZIP_DOF  --------->HSFB2a(2) ---------->DOF2 ========================================bZIP_DOF <---------LBD16      =================bZIP_DOF --->DOF2 <------ZmHOX2a(1)  ------>NtERF2    <---------ARR11(3)   <------ZmHOX2a(1)   gagaatctccgaggaaaacaaaagttgatggcgacgtctaagcttcaagctctctggaatcacccggcaggaccaaagacaagtgagttatcacattgtt  8419900                 <----------DOF2            <-----------GT1        --------->ARR11(3)        <---------ARR11(3)        <---------AHL20(1)        --------->AHL20(1)        --------->AHL20(2)                                                                --------->ARR11(3)        <---------AHL20(2)       --------->WOX13(1)                                   <---------ZAT14     --------->AHL20(2)    <---------ANAC58                                           --------->ZAT14     --------->YAB1        <---------ANAC58                                           <---------ZAT18    <---------ATHB12  <<<<<<<<<TBF1 --------->YAB1       <---------YAB1           <---------------AtSPL8 ===========================bZIP_DOF<---------ICU4  ----------->GT1         ----------->GT1   tcatcaataatatattactctttcttcttccgtttcaattaagactctattgaaacgttactattggaaaatgttgaattgtttatagtacagttcttga  8420000                                                                                                  <--                                                                                         ----------->GT1                                       <---------ARR11(3)                                <---------ANAC58                                       --------->AHL20(2)                                <------MYB83                                       <---------AHL20(2)                                <---------ANAC58                   --------->AHL20(2)  --------->ARR11(3)                                <---------ANAC46                 <----------DOF2       <---------AHL20(1)                                <------MYB46(1)      <---------ARR11(3)               --------->AHL20(1)                               --------->MYB59      --------->GLK1(2)             --------->YAB1                                      <---------MYB46(3)      --------->ARR11(3)            --------->AHL20(2)    <---------GLK1(2)         <---------MYB46(3)     --------->RVE1(1)         <---------ATHB12  --------->YAB1         <-----------RAV1(1)    ------   --------->AHL20(2)     ------>ZmHOX2a(1)  <---------YAB1       <----------DOF2   <-----------RAV1(1)   caaaaaaaaatctatatcactttaaatcctctaatgaataatatattctaattgtaaacagtttctctctttttttgttgttgttgttgttgggtattaa  8420100                                                                                     ------->TEIL                                                                       --------->LBD16                                                                      --------->HSFB2a(2)                                                                      <---------HSFB2a(2)   <--------                                                             --------->LBD16         --------->SPL7                                                            --------->HSFC1(1)       <---------TOE1(2)                                                            <---------HSFB2a(2)   <---------ANAC58                                                            --------->HSFB2a(2)   <---------ANAC58                              <---------ANAC58              <---------HSFC1(1)   --------------->AtSPL8                              <---------ANAC58          --------->GLK1(1)        --------------->AtSPL3                              <---------ANAC46          <---------GLK1(1)   --------->ARR11(3)                           --------->ALFIN1            <---------ARR14(2)   <---------ARR11(3) -------ICU4           <---------AHL20(2)              <---------GLK1(2)    --------->AHL20(1) --->WOX13(1)    ----------->RAV1(1)  <---------ICU4   --------->ARR14(2)   <---------AHL20(1)     --   tcagttcatttctgggctccaacatttaagtggggtataagcattgctaacattgcagatttccagaaacctccagaaaatatttcgtaccttcagcaaa  8420200                                                                           <---------AHL20(2)                                                   ----------->GT1         --------->ATHB12                                                <---------ICU4             -------->HAHB4                                                --------->ATHB12           <---------ICU4                                                --------->ATHB51           --------->ATHB51                                                -------->ATHB1             -------->ATHB1                                                <--------ATHB1            <---------YAB1                                                --------->YAB1            <---------ATHB51                                               <---------ATHB51         <--------HAHB4                                               --------->ICU4           --------->YAB1                                               <---------YAB1           --------->ATHB51      -------                                            ------------>ATHB5          <---------ICU4        -------                                     <---------ANAC58                  --------->ICU4         -------                                     <---------ANAC58<---------YAB1  --------->TOE2(3)   ----------->HVH21                                  <----------DOF2 <---------YAB1  <-----------GT1    <---------At4g35610 -At4g35610            <---------GLK1(1)    <---------YAB1   --------->AHL20(1)      --------->At4g35610 --------->GT1         --------->GLK1(1)  <-----------GT1   --------->YAB1--------->ICU4<-----------HVH21   ttggtaaataactactactcttcagaaatctctaatctttcttgttacaattattgttataaacatattatccataattattgtattagctgtgacatgc  8420300  Previous    Next  AGI:  At4g14695.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22310.1); similar to unknown [Populus trichocarpa] (GB:ABK93494.1); contains InterPro domain Protein of unknown function UPF0041 (InterPro:IPR005336) Range:  from: 8419794    to: 8420993    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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