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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
--------->
AHL20(1)
<-
--------->
AHL20(2)
--
<---------
AHL20(1)
--
<---------
AHL20(2)
<---------
TOE2(3)
<-
<---------
AtLEC2
--------->
AHL20(2)
<---------
TOE2(2)
---
--------
ARR11(3)
----------->
GT1
<-----------
GT1
---
------->
ARR11(3)
>>>>>>>>>
TBF1
<---------
AHL20(2)
<---------
TOE1(2)
------->
TEIL
-----
agataatgtgaatggagaagaagaagtaaaaaataaattttagcttctatccaaggtttgagagtttatgcattcttttgaaatgaatcaagagccaaga
8419400
-------->
HAHB4
<---------
ICU4
--------->
YAB1
--------->
ICU4
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
ANAC58
-------
HAHB4
--------->
AtMYB61
--------->
ANAC58
------->
YAB1
<---------
YAB1
---------->
DOF2
--------->
ANAC58
------->
ATHB51
<---------
YAB1
<---------
YAB1
--------->
ANAC58
--------
ICU4
<---------
ANAC58
<---------
ANAC55(2)
---------->
DOF2
--------->
MYB52(1)
------>
ICU4
--------------------->
WRI1
<---------
ICU4
<---------
ICU4
--------->
ANAC58
------>
AHL20(2)
<---------
ANAC46
--------->
ICU4
--------->
YAB1
--------->
ANAC46
---->
YAB1
<---------
ANAC58
--------->
YAB1
--------->
ICU4
--------->
ANAC58
ataattaattatgctcttccttgttattatcgaccaatagagtcatcatgtgtctgccataatgaaagtaaagcaagttccaagacgaaacgaaattgaa
8419500
<---------
ANAC58
<---------
ANAC58
---------->
DOF2
--------->
ANAC58
--------->
YAB1
--------->
At4g35610
--------->
MYB52(2)
<---------
ATHB12
<---------
At4g35610
<--------
P
--------->
WOX13(1)
-
<-----------
GT1
--------->
ANAC58
---------->
DOF2
<-----------
HVH21
---
tgcgatttctctctaacaaatcacctcatctcaattctcaagcccatgggttagtctcatcaaagcccaatcaaagcgtcaatgcttcccaagaacaaaa
8419600
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
ARR14(3)
<---------
AGP1
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ARR14(3)
<---------
TOE2(3)
<-----------
ARR10
--------->
ANAC58
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ANAC58
-
--------->
ARR11(3)
--------->
AGP1
<---------
REM1(2)
<-
<---------
AHL20(2)
----------->
ARR10
<---------
ZAT14
<---------
YAB1
--------->
AHL20(2)
---------->
DOF2
--------->
ANAC46
<---------
AHL20(2)
<---------
AHL20(1)
=============
HOX2a_HOX2a
--------->
ZAT14
--------->
AHL20(1)
--------->
AHL20(1)
==============
HOX2a_HOX2a
--------->
ANAC46
--------->
AHL20(2)
--------->
AHL20(2)
<------
ZmHOX2a(1)
--------->
ZAT6
<---------
AHL20(1)
-------->
AHL20(2)
--------------->
AGL15
----------->
RAV1(1)
------->
TEIL
--
------>
AHL20(2)
--------->
MYB46(3)
---------->
DOF2
--------->
REM1(1)
<------
ZmHOX2a(2)
----
aaaaatatattaagatgaacaaacaaaaaaacacttaaaagaggaaagatctggccactacaacactacacgatagtacgatcgatgaatataatcggaa
8419700
<---------
O2
--------->
O2
<---------
bZIP60(1)
<----------
DOF2
<---------
ANAC46
------------>
CBF
--------->
ANAC46
*
TSS
<
<---------
ANAC58
<---------
ANAC58
<---------
ICU4
=======
<---------
ANAC58
<---------
ANAC58
<---------
MYB52(1)
----------->
GT1
-------->
CCA1(2)
<------------
CBF
--------->
TOE2(3)
--------->
ANAC58
--------
ARR11(3)
<---------
ANAC55(2)
--------->
ATHB12
--------->
ANAC58
------->
ARR11(1)
--------->
ANAC55(2)
<---------
ICU4
<---------
TOE2(3)
--------->
ANAC46
------->
ARR10
--------->
AHL20(2)
--------->
bZIP60(1)
----------->
GT1
<------
ZmHOX2a(1)
-------
agatttgagtggctcaattacatattgcttatacgacgtcgttttgagtagcatcatttcgttaatatttatgtaggagactgaaacaagaca
gagaaaa
8419800
===================================================
bZIP_DOF
---------->
DOF2
--------->
HSFB2a(2)
<---------
O2
<------
NtERF2
--------->
LBD16
<---------
ANAC46
--------->
LBD16
<---------
HSFB2a(1)
--------->
O2
--------->
ANAC46
<---------
GLK1(1)
--------->
TGA1a
--------->
ANAC58
--------->
TGA1a
--------->
GLK1(2)
<---------
TGA1a
--------->
ANAC58
--------->
O2
<-----------
ARR10
<------
NtERF2
<---------
LBD16
=======================
<---------
ARR14(2)
--------->
ATERF1(1)
--------->
MYB46(3)
<---------
O2
--------->
ARR14(2)
<---------
ATERF1(1)
<---------
HSFB2a(2)
<---------
TGA1a
---------
GLK1(2)
========================
bZIP_DOF
--------->
HSFB2a(2)
---------->
DOF2
========================================
bZIP_DOF
<---------
LBD16
=================
bZIP_DOF
--->
DOF2
<------
ZmHOX2a(1)
------>
NtERF2
<---------
ARR11(3)
<------
ZmHOX2a(1)
gagaatctccgaggaaaacaaaagttg
atggcgacgtctaagcttcaagctctctggaatcacccggcaggaccaaagacaa
gtgagttatcacattgtt
8419900
<----------
DOF2
<-----------
GT1
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(2)
--------->
WOX13(1)
<---------
ZAT14
--------->
AHL20(2)
<---------
ANAC58
--------->
ZAT14
--------->
YAB1
<---------
ANAC58
<---------
ZAT18
<---------
ATHB12
<<<<<<<<<
TBF1
--------->
YAB1
<---------
YAB1
<---------------
AtSPL8
===========================
bZIP_DOF
<---------
ICU4
----------->
GT1
----------->
GT1
tcatcaataatatattactctttcttcttccgtttcaattaagactctattgaaacgttactattggaaaatgttgaattgtttatagtacagttcttga
8420000
<--
----------->
GT1
<---------
ARR11(3)
<---------
ANAC58
--------->
AHL20(2)
<------
MYB83
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
--------->
ARR11(3)
<---------
ANAC46
<----------
DOF2
<---------
AHL20(1)
<------
MYB46(1)
<---------
ARR11(3)
--------->
AHL20(1)
--------->
MYB59
--------->
GLK1(2)
--------->
YAB1
<---------
MYB46(3)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
GLK1(2)
<---------
MYB46(3)
--------->
RVE1(1)
<---------
ATHB12
--------->
YAB1
<-----------
RAV1(1)
------
--------->
AHL20(2)
------>
ZmHOX2a(1)
<---------
YAB1
<----------
DOF2
<-----------
RAV1(1)
caaaaaaaaatctatatcactttaaatcctctaatgaataatatattctaattgtaaacagtttctctctttttttgttgttgttgttgttgggtattaa
8420100
------->
TEIL
--------->
LBD16
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<--------
--------->
LBD16
--------->
SPL7
--------->
HSFC1(1)
<---------
TOE1(2)
<---------
HSFB2a(2)
<---------
ANAC58
--------->
HSFB2a(2)
<---------
ANAC58
<---------
ANAC58
<---------
HSFC1(1)
--------------->
AtSPL8
<---------
ANAC58
--------->
GLK1(1)
--------------->
AtSPL3
<---------
ANAC46
<---------
GLK1(1)
--------->
ARR11(3)
--------->
ALFIN1
<---------
ARR14(2)
<---------
ARR11(3)
-------
ICU4
<---------
AHL20(2)
<---------
GLK1(2)
--------->
AHL20(1)
--->
WOX13(1)
----------->
RAV1(1)
<---------
ICU4
--------->
ARR14(2)
<---------
AHL20(1)
--
tcag
ttcatttctgggctccaacatttaagtggggtataagcattgctaacattgcagatttccagaaacctccagaaaatatttcgtaccttcagcaaa
8420200
<---------
AHL20(2)
----------->
GT1
--------->
ATHB12
<---------
ICU4
-------->
HAHB4
--------->
ATHB12
<---------
ICU4
--------->
ATHB51
--------->
ATHB51
-------->
ATHB1
-------->
ATHB1
<--------
ATHB1
<---------
YAB1
--------->
YAB1
<---------
ATHB51
<---------
ATHB51
<--------
HAHB4
--------->
ICU4
--------->
YAB1
<---------
YAB1
--------->
ATHB51
-------
------------>
ATHB5
<---------
ICU4
-------
<---------
ANAC58
--------->
ICU4
-------
<---------
ANAC58
<---------
YAB1
--------->
TOE2(3)
----------->
HVH21
<----------
DOF2
<---------
YAB1
<-----------
GT1
<---------
At4g35610
-
At4g35610
<---------
GLK1(1)
<---------
YAB1
--------->
AHL20(1)
--------->
At4g35610
--------->
GT1
--------->
GLK1(1)
<-----------
GT1
--------->
YAB1
--------->
ICU4
<-----------
HVH21
ttg
gtaaataactactactcttcagaaatctctaatctttcttgttacaattattgttataaacatattatccataattattgtattag
ctgtgacatgc
8420300
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AGI:
At4g14695.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22310.1); similar to unknown [Populus trichocarpa] (GB:ABK93494.1); contains InterPro domain Protein of unknown function UPF0041 (InterPro:IPR005336)
Range:
from: 8419794
to: 8420993
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.