Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------->TEIL           <---------ANAC46         <-------TEIL                                            <--------   <-----------RAV1(1)          <---------------AtSPL3                                    <---------ANAC58   --------->ALFIN1             <---------------AtSPL8                                    <---------ANAC58 --------->ANAC55(2)     ------->GAMYB  <-------TEIL                                <---------YAB1 --------HVH21         --------->At4g35610                 <---------GLK1(2)     --------->ICU4 --------TGA1          <---------At4g35610             ---------->DOF2       ----------->RAV1(1)   gtcatgtgttgctccttgtgaagacaactgcaaacatgtacgttcaaacaaatttagaaaagagtctcttcagttttagcaacattatgagtgagtgtga  8137900                                         --------->GLK1(2)                                     <------NtERF2                                  <------NtERF2                                 <---------RAP2.6(3)                                 ------>NtERF2                                 <---------SPL7 ------>NtERF2                                --------->DEAR3(1)                                --------->ATERF1(2)                                <---------RAP2.6(2)                                <---------ATERF1(2)                               --------->DEAR3(2)                               --------->RAP2.6(3)                               --------->ATERF1(1)                              --------->ABI4(2)<---------ETT(2)                     --------->ARR14(2)                             <---------DEAR3(1)--------->DEAR3(1)       ------>ZmHOX2a(2)                             --------->ALFIN1 --------->RAP2.3(1)       --------->DEAR3(2)                          <---------DEAR3(1) ------>NtERF2             <------ZmHOX2a(2)           <---------ANAC55(2)------>NtERF2<---------LBD16 <---------At4g35610      <---------ARR14(2)           --------->ANAC55(2)<---------ATERF1(1)<------NtERF2        <---------ARR14(2)           <---------ANAC46 --------->ATERF1(1)----------->HVH21      --------->ARR14(2)      --------->ANAC58    <---------bZIP60(2)--------->LBD16  <-------TEIL     ------>MYB83      --------->ANAC58 ----------->TGA1  --------->ARR14(2)--------->ZAT2    <---------MYB59     <---------------------WRI1<------NtERF2<---------LBD16--------->At4g35610 ------>MYB46(1) -ZAT6--------->ANAC46 ----------->HVH21 <---------ARR14(2)<---------ZAT2----------->HVH21<----------DOF2   gtttgaaaacgctacgtagtaagcagtgacggtgccggccgagtttccggcgacaagtttgagctgcatatcgatccgaccgaacaaatactcttttttg  8138000                                                                                        <---------bZIP60(1)                                                                                        ----------->GT1                                                            <---------ARR14(3)         --------->MYB59                   ----------->RAV1(2)                      --------->ARR14(3)     --------->O2                   =======================RAV               <---------GLK1(2)      --------->TGA1a                 --------->GLK1(1)                          <---------ARR14(2)     <---------O2                 <---------GLK1(1)                          --------->ARR11(3)     <---------TGA1a              --------->LBD16                               <---------ARR11(3)--------->ANAC58             --------->ANAC58               --------->ARR14(2)                --------->ANAC58             --------->ANAC58               <---------ARR14(2)              <---------WRKY38(1)            <---------LBD16      ---------->DOF2     <-------GAMYB        <-----------HVH21        ----------->HVH21     ----------->RAV1(1)    ========================================MYC_MYB      ----------->RAV1(2)    ----------->HVH21    ------>ZmHOX2a(1)   <-----------RAV1(1) --------->WRKY18(1)   gatttgaaacctgacccggaaacctggtccagcgacaaagacagcatatttcctccgttgaagattttgcctctgtggtcaccccaagtgaggtcaaact  8138100                          --------->DEAR3(2)                        --------->ARR14(2)                        <---------ARR14(2)                        --------->MYB52(1)                       <---------SPL7                       <------NtERF2                      --------->RAP2.6(2)                                                         <--                     <---------------------WRI1                 <---------MYB46(3)                <--                  --------->SPL7                               --------->ALFIN1                  <---               <---------ANAC58                              <---------MYB46(3)                 <----               <---------ANAC58                             <---------AtMYB61                   <----               <---------ANAC46    <-----------HVH21    ------>NtERF2                          <-----           <---------ANAC58  ------>MYB83             <------NtERF2                            ------           <---------ANAC58  ------>MYB46(1)        --------->RAP2.6(2)            <-----------------AGL1           <---------ANAC46<---------MYB59          --------->ANAC46              --------->PCF2<----   cgtcgaagaagttgcttgcgtaggccgaaccgaacaatgtcacaagaagaacagtcgccacgatggtggtgaggctcgaacttggacccatttgggtttg  8138200                                                                                                  ---                                                                                                  <--                                                                                          --------->CCA1(2) -------WOX13(1)                                                            *TSS          --------->GLK1(1) ------P                                                              --------->At4g35610<---------ARR11(3) ----GAMYB                                                            <---------At4g35610--------->ARR14(2) --MYB46(1)         <---------ANAC46                             <---------ANAC46        <---------ARR14(2) --MYB83         <---------ANAC46                                <---------ANAC58        --------->ARR11(3) ----AtMYB61     --------->ALFIN1                                <---------ANAC58      ----------->ARR10 --->MYB59---------->DOF2                                     <---------AtMYB61       <------ZmHOX2a(1) -----MYB46(3) --------->ALFIN1       ---------->DOF2<----------DOF2<---------------------WRI1  <----   gttgatagaaatgaaagttgtgggggtgagtttggaaactaaaagaagatgagagctttgtgttttggtgtgagatgagttttaagaaggagatatgcat  8138300                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                       --------->At4g35610                                       <---------At4g35610                                   --------                       <---------At4g35610                                                  ---------                       --------->At4g35610                                                 ----------               <------------CBF  -------->P                                         <---------AHL20(1)            --------->ANAC58     ------>MYB83                                       --------->AHL20(1)      --------->ALFIN1--------->ANAC58<xxxxxxxxxxxxxxxxsmallRNA(i)              --------->YAB1 ------>AHL20(2)      --------->ANAC58----------->RAV1(1)                      --------->AHL20(2) ---------TBP --------->ATHB12   ------>MYB46(1)                      --------->YAB1--------->ARR11(3) -------TBP --------->ANAC58   --------->AtMYB61                 ------------>CBF--------->AHL20(2)   atatataggtggagaagcattgggaagctaagaccaactccagcagtagtttcttagtagaaactcatacaattttaaaaaataaaaatattgaaaagtt  8138400                                          ------>ZmHOX2a(2)                              --------------->AGL15                                        --------->AHL20(2)                              <---------------AGL15                                        <---------AHL20(2)                              ------>ZmHOX2a(1)                                            <---------YAB1                              ===================HOX2a_HOX2a                              --------->TOE2(3)                             <-----------------AGL3                                     --------->AHL20(1)                             ----------------->AGL3              <------MYB46(1)        --------->AHL20(2)     --------->At4g35610     =========================================MADS_MADS         <---------AHL20(1) --->GT1        --------->ARR11(3)      >>>>>>>>>ARR2 --------------->AGL15             <---------AHL20(2) >DAG2          --------->GLK1(2)       >>>>>>>>>ARR1 <---------------AGL15       ----------->GT1 >DOF2          <---------ARR11(3)     <------ZmHOX2a(1)         <------MYB83   ---------->DOF2   aagaaacagatgagagaaaatctctaaaattcctaatattaggatcgtttctattactcatataagttggttttttggatgtaaaagtaaaatattaata  8138500                                                                          --------->AHL20(2)                            ------>ZmHOX2a(1)             <---------GLK1(2)                 ---------                        ------->TEIL                <-----------GT1       <---------AHL20(2)---------   cattttgttttcttagaaactacatgaatcctatacaatggagttgctctaacttaaccagattgtgttttgacatttatttgctcattttcaatagtaa  8138600               ------->TEIL                 <---------YAB1         --------->ATHB51                 <---------ICU4         --------->ATHB12                 --------->ATHB12         <---------ICU4                   <--------HAHB4         -------->HAHB4    -------->ATHB1<---------ATHB12         <--------ATHB1    --------->ATHB51 --------->ICU4         --------->YAB1    --------->ATHB12--------->TOE2(3)        <---------YAB1    <---------YAB1 --------->ICU4          <---------YAB1        <---------ATHB51 --------------->AGL15                   --------->ICU4     <---------YAB1      <----------DOF2 <---------YAB1        --------->YAB1  <---------AHL20(2) >YAB1--------->YAB1     <---------------AGL15         <----------DOF2         --------->AHL20(2) -->GT1 --------->ICU4  ----------------->AGL1        --------->TOE2(3)       --------->YAB1   atagctcataataattgcatcttattgcattattgagaaactcatcattagtatttcctttattctcatgatcaggcctattttaatatggatggaattt  8138700                                                                              <---------ZAT14                                                                       <---------ZAT2                                                                       --------->At4g35610                                                                       <---------At4g35610                                                  <----------ID1     --------->ZAT18                                                <---------------AtSPL8 --------->ZAT2  <---------ZAT14                                           ------------------------>ANAC81    --------->ZAT14                    ----------->GT1      ---------->DOF2          --------->ALFIN1   --------->ZAT14                  ---------->DOF2<---------At4g35610              <XXXXXXXXXXXXXXXXXXXXMIR398A             ---------->DOF2     --------->At4g35610      ---------->DOF2     --------->ZAT18        ----------->GT1       ---------->DOF2---------->DOF2    --------->ALFIN1     <---------ZAT14<   tgaaacaaaatagaaaaaagaaaagagaaaatgaaagctgtccaaaagaaagagaacaaaaaaagagtgtgtgagctgagaacactgagtactgagttcg  8138800  Previous    Next  AGI:  At4g14130.1    Description:  XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 15 precursor (XTH15) [Arabidopsis Thaliana] (GB:Q38911;GB:O23272); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT3G23730.1); similar to xyloglucan endotransglycosylase/hydrolase precursor XTH-21 [Populus tremula x Populus tremuloides] (GB:ABM91075.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain G Range:  from: 8137046    to: 8138276    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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