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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------->
TEIL
<---------
ANAC46
<-------
TEIL
<--------
<-----------
RAV1(1)
<---------------
AtSPL3
<---------
ANAC58
--------->
ALFIN1
<---------------
AtSPL8
<---------
ANAC58
--------->
ANAC55(2)
------->
GAMYB
<-------
TEIL
<---------
YAB1
--------
HVH21
--------->
At4g35610
<---------
GLK1(2)
--------->
ICU4
--------
TGA1
<---------
At4g35610
---------->
DOF2
----------->
RAV1(1)
gtcatgtgttgctccttgtgaagacaa
ctgcaaacatgtacgttcaaacaaatttagaaaagagtctcttcagttttagcaacattatgagtgagtgtga
8137900
--------->
GLK1(2)
<------
NtERF2
<------
NtERF2
<---------
RAP2.6(3)
------>
NtERF2
<---------
SPL7
------>
NtERF2
--------->
DEAR3(1)
--------->
ATERF1(2)
<---------
RAP2.6(2)
<---------
ATERF1(2)
--------->
DEAR3(2)
--------->
RAP2.6(3)
--------->
ATERF1(1)
--------->
ABI4(2)
<---------
ETT(2)
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
DEAR3(1)
------>
ZmHOX2a(2)
--------->
ALFIN1
--------->
RAP2.3(1)
--------->
DEAR3(2)
<---------
DEAR3(1)
------>
NtERF2
<------
ZmHOX2a(2)
<---------
ANAC55(2)
------>
NtERF2
<---------
LBD16
<---------
At4g35610
<---------
ARR14(2)
--------->
ANAC55(2)
<---------
ATERF1(1)
<------
NtERF2
<---------
ARR14(2)
<---------
ANAC46
--------->
ATERF1(1)
----------->
HVH21
--------->
ARR14(2)
--------->
ANAC58
<---------
bZIP60(2)
--------->
LBD16
<-------
TEIL
------>
MYB83
--------->
ANAC58
----------->
TGA1
--------->
ARR14(2)
--------->
ZAT2
<---------
MYB59
<---------------------
WRI1
<------
NtERF2
<---------
LBD16
--------->
At4g35610
------>
MYB46(1)
-
ZAT6
--------->
ANAC46
----------->
HVH21
<---------
ARR14(2)
<---------
ZAT2
----------->
HVH21
<----------
DOF2
gtttgaaaacgctac
gtagtaagcagtgacggtgccggccgagtttccggcgacaagtttgagctgcatatcgatccgaccgaacaaatactcttttttg
8138000
<---------
bZIP60(1)
----------->
GT1
<---------
ARR14(3)
--------->
MYB59
----------->
RAV1(2)
--------->
ARR14(3)
--------->
O2
=======================
RAV
<---------
GLK1(2)
--------->
TGA1a
--------->
GLK1(1)
<---------
ARR14(2)
<---------
O2
<---------
GLK1(1)
--------->
ARR11(3)
<---------
TGA1a
--------->
LBD16
<---------
ARR11(3)
--------->
ANAC58
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC58
--------->
ANAC58
<---------
ARR14(2)
<---------
WRKY38(1)
<---------
LBD16
---------->
DOF2
<-------
GAMYB
<-----------
HVH21
----------->
HVH21
----------->
RAV1(1)
========================================
MYC_MYB
----------->
RAV1(2)
----------->
HVH21
------>
ZmHOX2a(1)
<-----------
RAV1(1)
--------->
WRKY18(1)
gatttgaaacctgacccggaaacctggtccagcgacaaagacagcatatttcctccgttgaagattttgcctctgtggtcaccccaagtgaggtcaaact
8138100
--------->
DEAR3(2)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
MYB52(1)
<---------
SPL7
<------
NtERF2
--------->
RAP2.6(2)
<--
<---------------------
WRI1
<---------
MYB46(3)
<--
--------->
SPL7
--------->
ALFIN1
<---
<---------
ANAC58
<---------
MYB46(3)
<----
<---------
ANAC58
<---------
AtMYB61
<----
<---------
ANAC46
<-----------
HVH21
------>
NtERF2
<-----
<---------
ANAC58
------>
MYB83
<------
NtERF2
------
<---------
ANAC58
------>
MYB46(1)
--------->
RAP2.6(2)
<-----------------
AGL1
<---------
ANAC46
<---------
MYB59
--------->
ANAC46
--------->
PCF2
<----
cgtcgaagaagttgcttgcgtaggccgaaccgaacaatgtcacaagaagaacagtcgccacgatggtggtgaggctcgaacttggacccat
ttgggtttg
8138200
---
<--
--------->
CCA1(2)
-------
WOX13(1)
*
TSS
--------->
GLK1(1)
------
P
--------->
At4g35610
<---------
ARR11(3)
----
GAMYB
<---------
At4g35610
--------->
ARR14(2)
--
MYB46(1)
<---------
ANAC46
<---------
ANAC46
<---------
ARR14(2)
--
MYB83
<---------
ANAC46
<---------
ANAC58
--------->
ARR11(3)
----
AtMYB61
--------->
ALFIN1
<---------
ANAC58
----------->
ARR10
--->
MYB59
---------->
DOF2
<---------
AtMYB61
<------
ZmHOX2a(1)
-----
MYB46(3)
--------->
ALFIN1
---------->
DOF2
<----------
DOF2
<---------------------
WRI1
<----
gttgatagaaatgaaagttgtgggggtgagtttggaaactaaaagaagatgagagctttgtgttttggtgtgagat
gagttttaagaaggagatatgcat
8138300
<xxxxxxxxxxxxxxxx
smallRNA(i)
--------->
At4g35610
<---------
At4g35610
--------
<---------
At4g35610
---------
--------->
At4g35610
----------
<------------
CBF
-------->
P
<---------
AHL20(1)
--------->
ANAC58
------>
MYB83
--------->
AHL20(1)
--------->
ALFIN1
--------->
ANAC58
<xxxxxxxxxxxxxxxx
smallRNA(i)
--------->
YAB1
------>
AHL20(2)
--------->
ANAC58
----------->
RAV1(1)
--------->
AHL20(2)
---------
TBP
--------->
ATHB12
------>
MYB46(1)
--------->
YAB1
--------->
ARR11(3)
-------
TBP
--------->
ANAC58
--------->
AtMYB61
------------>
CBF
--------->
AHL20(2)
atatataggtggagaagcattgggaagctaagaccaactccagcagtagtttcttagtagaaactcatacaattttaaaaaataaaaatattgaaaagtt
8138400
------>
ZmHOX2a(2)
--------------->
AGL15
--------->
AHL20(2)
<---------------
AGL15
<---------
AHL20(2)
------>
ZmHOX2a(1)
<---------
YAB1
===================
HOX2a_HOX2a
--------->
TOE2(3)
<-----------------
AGL3
--------->
AHL20(1)
----------------->
AGL3
<------
MYB46(1)
--------->
AHL20(2)
--------->
At4g35610
=========================================
MADS_MADS
<---------
AHL20(1)
--->
GT1
--------->
ARR11(3)
>>>>>>>>>
ARR2
--------------->
AGL15
<---------
AHL20(2)
>
DAG2
--------->
GLK1(2)
>>>>>>>>>
ARR1
<---------------
AGL15
----------->
GT1
>
DOF2
<---------
ARR11(3)
<------
ZmHOX2a(1)
<------
MYB83
---------->
DOF2
aagaaacagatgagagaaaatctctaaaattcctaatattaggatcgtttctattactcatataagttggttttttggatgtaaaagtaaaatattaata
8138500
--------->
AHL20(2)
------>
ZmHOX2a(1)
<---------
GLK1(2)
---------
------->
TEIL
<-----------
GT1
<---------
AHL20(2)
---------
cattttgttttcttagaaactacatgaatcctatacaatggagttgctctaacttaaccagattgtgttttgacatttatttgctcattttcaatagtaa
8138600
------->
TEIL
<---------
YAB1
--------->
ATHB51
<---------
ICU4
--------->
ATHB12
--------->
ATHB12
<---------
ICU4
<--------
HAHB4
-------->
HAHB4
-------->
ATHB1
<---------
ATHB12
<--------
ATHB1
--------->
ATHB51
--------->
ICU4
--------->
YAB1
--------->
ATHB12
--------->
TOE2(3)
<---------
YAB1
<---------
YAB1
--------->
ICU4
<---------
YAB1
<---------
ATHB51
--------------->
AGL15
--------->
ICU4
<---------
YAB1
<----------
DOF2
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
>
YAB1
--------->
YAB1
<---------------
AGL15
<----------
DOF2
--------->
AHL20(2)
-->
GT1
--------->
ICU4
----------------->
AGL1
--------->
TOE2(3)
--------->
YAB1
atagctcataataattgcatcttattgcattattgagaaactcatcattagtatttcctttattctcatgatcaggcctattttaatatggatggaattt
8138700
<---------
ZAT14
<---------
ZAT2
--------->
At4g35610
<---------
At4g35610
<----------
ID1
--------->
ZAT18
<---------------
AtSPL8
--------->
ZAT2
<---------
ZAT14
------------------------>
ANAC81
--------->
ZAT14
----------->
GT1
---------->
DOF2
--------->
ALFIN1
--------->
ZAT14
---------->
DOF2
<---------
At4g35610
<XXXXXXXXXXXXXXXXXXXX
MIR398A
---------->
DOF2
--------->
At4g35610
---------->
DOF2
--------->
ZAT18
----------->
GT1
---------->
DOF2
---------->
DOF2
--------->
ALFIN1
<---------
ZAT14
<
tgaaacaaaatagaaaaaagaaaagagaaaatgaaagctgtccaaaagaaagagaacaaaaaaagagtgtgtgagctgagaacactgagtactgagttcg
8138800
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AGI:
At4g14130.1
Description:
XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 15 precursor (XTH15) [Arabidopsis Thaliana] (GB:Q38911;GB:O23272); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT3G23730.1); similar to xyloglucan endotransglycosylase/hydrolase precursor XTH-21 [Populus tremula x Populus tremuloides] (GB:ABM91075.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain G
Range:
from: 8137046
to: 8138276
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.