Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ARR14(2)                                                                             <---------ARR14(2)                          <---------ANAC46                               <---------HSFB2a(2)           <---------ETT(1)                            <---------AHL20(2)--------->HSFB2a(2)           --------->DEAR3(1)                          --------->AHL20(2)--------->LBD16      <-----------HVH21   <---------ANAC58          --------->YAB1--------->WRKY38(1)           ----- ->At4g35610              <---------ANAC58  <---------At5g28300   --------->WRKY12              <---- ->LBD16   --------->DREB2C(2)             <-----------GT1      --------->At4g35610       --------->GLK1(2) --At4g35610  ---------->DOF2           --------->ARR11(3)     <-----------RAV1(1)        <---------ARR11(3) -ANAC46   --------->At1g77200          <---------ARR11(3)     <---------MYB46(3)         --------->ARR11(3) ->WRI1    --------->DEAR4(1)      <-------TEIL  ----------->RAV1(1)   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   aacatcgctatcaccgacaagctgattttcttgtagatgcaagatttaccacaacaataaatcatctgttgactccgagaaaccgcttgaaaaatctgtc  7923900                                                                                           --------->TOE1(3)                                                                                          -----------                                                                                         -------->P                                                                                        ------>MYB46(1)                                                                                        ------>MYB83                                  --------->AHL20(2)                                  <---------MYB46(2)                         --------->YAB1                                               <---------MYB59 ---->ETT(2)      <---------GLK1(1)                                                   --------->AtMYB61 -----ETT(2)      --------->GLK1(1)   --------->GLK1(2)                    --------->REM1(1)   tacaaacactgcaaaattggaattctataaaaaaaaaaaaattctgtttcgatacaaactaaaccgaggcataagcttcacctatagacctaacctgaag  7924000                                                                                                  <--                       --------->GLK1(2)                                                   ----------                      --------->YAB1                             --------->ARR14(2)        <------MYB83                     <---------KAN4(1)                           <---------GLK1(2)         <------MYB46(1)                     --------->KAN4(1)                           <---------ARR14(2)       --------->MYB59                <---------TOE2(3)                               ------>MYB46(1)   --------->At4g35610               <---------DOF5.7(2)        --------->WOX13(1)    ------>MYB83  --------->ARR14(2)  ---               --------->MYB52(1)      --------->TOE2(3)      <---------MYB59 <---------ARR14(2) <---      <---------MYB52(1)             --------->AHL20(1)    <-----------GT1   <---------CCA1(2)   ---- --------->ANAC46   <---------KAN4(2)<---------AHL20(1) <---------ICU4       <---------GLK1(1)   <--- >RAV1(2)   --------->TOE2(3)       --------->YAB1     --------->ICU4<---------YAB1      <--------P   tctactccattattcattaacgaataatcttttggcaaaaatattaatcaaatggcaattttgaccaaattctcatttcatatccgctcaagttggtaat  7924100             --------->AHL20(2)             <---------AHL20(2)             --------->AHL20(1)             <---------AHL20(1)                                                          --------->ANAC58          <---------AHL20(1)                                                             --------->ANAC58          --------->AHL20(2)                                                         <---------ANAC58          --------->AHL20(1)                                                         <---------ANAC58       ------>MYB46(1)                                                              --------------->AtSPL3     <---------MYB59                                                                <---------------AtSPL3  <-----------GT1                                                                   --------------->AtSPL8 -------AHL20(2)                                                                    <---------------AtSPL8 ->GT1 ------>MYB83                                    ----------->GT1      --------->DAG2          < ------>AHL20(2)                             --------->AHL20(2)     --------->ARR14(2)  --------->SPL7 ------AHL20(1)                       ---------->DOF2 <---------HSFB2a(2)  ---------->DOF2   -------- ----->AHL20(2)               <---------YAB1 <---------AHL20(2)     --------->GLK1(2)<---------ANAC46 ------AHL20(2)   <-----------GT1 ---------->DOF2<---------AHL20(2) <---------ARR14(2)<---------SPL7-   aaaattaccaaatattttattaacaaaacaatatgaaaaagaaagaattatataatcgagaaaaatagagaatatggaaaagtagaggcgtacgacaaag  7924200                          <---------AHL20(1)                          --------->AHL20(1)                        <---------At4g35610                          <---------ARR11(3)                        --------->At4g35610           --------->ANAC46                                      ------>ZmHOX2a(1)           --------->ANAC58  ----------->TBP                 <---------ARR11(3)                     -  --------->TOE2(3)      <-----------TBP                     <---------ARR14(2)                   ---  --------->TOE1(3) --------->ANAC46         <---------ATHB12--------->ARR14(2)                 <---- ---------ARR11(3)  --------->ANAC58     ------------>CBF    --------->ARR11(3)               <------ -->DOF2   --------->ANAC58  <---------AHL20(2)        ------>ZmHOX2a(1)                      <------ -------->ARR11(3)  --------->ANAC58--------->AHL20(2)--------->TOE2(3)                 <------------CBF   aagaccttaacacacacaattcaagcaatatataaaaaaaaaatccaatctttgttcctcaaaaatcctctgcttcgcgtttttcttcggcattgacttt  7924300   --------->YAB1     *TSS  <---------ATHB12   ------>ZmHOX2a(2)                         <---------GLK1(2) ------>MYB46(1)    <---------GLK1(1)                 --------->ARR14(2) ------>MYB83      --------->ARR14(2)                 <---------ARR14(2) -------->WOX13(1) <---------ARR14(2)                --------->GLK1(1) --------->CBF  --------->LBD16                      <---------CCA1(2) <----------DOF2     --------->GLK1(2) -------GT1    <---------LBD16              --------->YAB1<----------DOF2                 <---------GLK1(2) ---DAG2      <---------LBD16               <---------ICU4------>ZmHOX2a(1)             ----------->ARR10 ----DOF2<----------DOF2                   <---------ATHB12  <---------YAB1          <----------DOF2   accaatcacaactttctccgggatcgccgatttatcttcgtttcaaccatgactcatatccttttgattctctctttgcttcaatctctttagattctct  7924400                                                                  <------ZmHOX2a(1)                                                        ----------------->AGL3                                                  <---------TOE2(3)<---------ARR14(2)                            <---------AtMYB61     <---------TOE1(3)--------->ARR14(2)              <-                      <---------TOE1(3)          <---------DOF5.7(2)                       --------->YAB1     ------>NtERF2    <---------TOE2(3)          ---------->DOF2<---------TOE2(3)     <-------TEIL <-   gtttctcggccgattgcagaatttagggttttggtttgcagaattaggggttaaagttttcaaatttaggatttgttttgggagaagatgcaattgtagt  7924500                                                                   ------->TEIL                                   ------>ZmHOX2a(2)               --------->ARR11(3)                                  <------ZmHOX2a(2)                <---------AGP1                                 <---------ARR11(3)                <---------ARR14(2)                                 --------->ARR11(3)                --------->ARR14(2)                                 --------->ARR14(2)         <---------ANAC58   --------->GLK1(2)                                 --------->ARR14(3)         <---------ANAC58  <---------ARR14(2)                                 <---------ARR14(3)         <---------ANAC46  --------->ARR14(2)                                 <---------ARR14(2)    <-----------RAV1(1)    <---------GLK1(2)         <---------WOX13(1)      <---------AGP1        --------->HSFB2a(1)   <------ZmHOX2a(1)     --------->HSFB2a(2)         --------->AGP1   --------->HSFB2a(2)      <---------TOE2(3)     <---------HSFB2a(2)        <---------CCA1(2) <---------HSFB2a(2)===============HOX2a_HOX2a --------ANAC58                ----------->ARR10  --------->HSFC1(1) ------>ZmHOX2a(2)             << --------ANAC58         ---------->DOF2     <---------CCA1(1)      <---------ARR11(3)   ----------->GT1   ttcgtttctagattgctctgtttgtataaagactagatcttgttggatatttctcgaatgttgcttatggatcttataaggattctgaatttgtgaaact  7924600                                                          --------->ALFIN1                                                         ------->PIF5                                                         <-------MYC3                                                         <-------MYC2                                                         ------->MYC3                                                         ------->MYC2                                                         <-------PIF5                                                        <---------bZIP60(2)                                                        <---------O2                                                        <---------ANAC46                                                        <---------ANAC55(2)                                                        --------->TGA1a                            --                                                        <---------TGA1a                            <-                                                        --------->O2                               --                                                        =======================================bZIP_DOF                                                    <-----------HVH21                              <-                                                    <-----------TGA1                               <-                                                   --------->YAB1                        --------->At4g35610                                             <---------ANAC58                            <---------At4g35610                    <---------AHL20(2)       <---------ANAC58                            --------->ZAT2                    --------->AHL20(2)       <---------ANAC55(2)                    ---------->DOF2--                  ================================================bZIP_DOF       --------->At5g28300         <-------GAMYB        <----------DOF2<---------ANAC46                <---------WRKY18(1) ----        --------->ALFIN1      ====================================bZIP_DOF  ----------->HVH21  ------  ---------->DOF2 <----------DOF2<---------YAB1 <---------ARR14(2)        <---------ANAC58     <----- <<<<<ZML2        --------->TOE2(3)          --------->ANAC55(2)          <---------ANAC58  ------>NtERF2   agaacaaagtgtgttgttttctttaattcaagcttttgatttttgatgcgtaatcgtcacgtggaagtcagagagagcgtgaccgtgaaagagctgccgc  7924700                                                     <-----------HVH21                                                  ------->GAMYB                                                >>>>>>>>>MYB2   <---------AtMYB61                       <------NtERF2 <---------ZAT2                           --------->LBD16                           --------->GLK1(2) ----->MYC3                              --------->DEAR3(1)                         <---------ARR11(1) ------PIF5                             <------NtERF2--------->LBD16  --------->GLK1(2)<----------DOF2 ----->MYC2                             --------->ATERF1(1)           --------->ARR14(2)           -- ------MYC3                            ------>NtERF2 --------->At5g28300            <---------ARR14(2) ------MYC2                            <---------RAP2.3(1) ----------->GT1          --------->ARR14(2) ----->PIF5                           --------->ANAC46----------->HVH21             ------->TEIL   <- -------->OsbHLH66      ----------->TGA1<---------LBD16 ---------->DOF2        --------->MYB52(1) <-- >NtERF2     ----------->GT1   <---------MYB46(3)--------->DEAR3(1)   <---------ARR14(2)  --------->MYB52(2) ----At4g35610    --------->ICU4   ----------->HVH21<---------ANAC46  ------->TEIL <---------ARR14(1)   tcgtgctggtggaaagggtaagaatggtgacgatggtttgacgccggagcaacgccgtgaaaggtataaacgaatctgaaaaaacgaatctttagttggg  7924800  Previous    Next  AGI:  At4g13615.1    Description:  four F5 protein-related / 4F5 protein-related. contains InterPro domain Four F5 protein (InterPro:IPR007513) Range:  from: 7924322    to: 7925136    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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