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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ANAC46
<---------
HSFB2a(2)
<---------
ETT(1)
<---------
AHL20(2)
--------->
HSFB2a(2)
--------->
DEAR3(1)
--------->
AHL20(2)
--------->
LBD16
<-----------
HVH21
<---------
ANAC58
--------->
YAB1
--------->
WRKY38(1)
-----
->
At4g35610
<---------
ANAC58
<---------
At5g28300
--------->
WRKY12
<----
->
LBD16
--------->
DREB2C(2)
<-----------
GT1
--------->
At4g35610
--------->
GLK1(2)
--
At4g35610
---------->
DOF2
--------->
ARR11(3)
<-----------
RAV1(1)
<---------
ARR11(3)
-
ANAC46
--------->
At1g77200
<---------
ARR11(3)
<---------
MYB46(3)
--------->
ARR11(3)
->
WRI1
--------->
DEAR4(1)
<-------
TEIL
----------->
RAV1(1)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
aacatcgctatcaccgacaagctgattttcttgtagatgcaagatttaccacaacaataaatcatctgttgactccgagaaaccgcttgaaaaatctgtc
7923900
--------->
TOE1(3)
-----------
-------->
P
------>
MYB46(1)
------>
MYB83
--------->
AHL20(2)
<---------
MYB46(2)
--------->
YAB1
<---------
MYB59
---->
ETT(2)
<---------
GLK1(1)
--------->
AtMYB61
-----
ETT(2)
--------->
GLK1(1)
--------->
GLK1(2)
--------->
REM1(1)
tacaaacactgcaaaattggaattctataaaaaaaaaaaaattctgtttcgatacaaactaaaccgaggcataagcttcacctatagacctaacctgaag
7924000
<--
--------->
GLK1(2)
----------
--------->
YAB1
--------->
ARR14(2)
<------
MYB83
<---------
KAN4(1)
<---------
GLK1(2)
<------
MYB46(1)
--------->
KAN4(1)
<---------
ARR14(2)
--------->
MYB59
<---------
TOE2(3)
------>
MYB46(1)
--------->
At4g35610
<---------
DOF5.7(2)
--------->
WOX13(1)
------>
MYB83
--------->
ARR14(2)
---
--------->
MYB52(1)
--------->
TOE2(3)
<---------
MYB59
<---------
ARR14(2)
<---
<---------
MYB52(1)
--------->
AHL20(1)
<-----------
GT1
<---------
CCA1(2)
----
--------->
ANAC46
<---------
KAN4(2)
<---------
AHL20(1)
<---------
ICU4
<---------
GLK1(1)
<---
>
RAV1(2)
--------->
TOE2(3)
--------->
YAB1
--------->
ICU4
<---------
YAB1
<--------
P
tctactccattattcattaacgaataatcttttggcaaaaatattaatcaaatggcaattttgaccaaattctcatttcatatccgctcaagttggtaat
7924100
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
--------->
ANAC58
<---------
AHL20(1)
--------->
ANAC58
--------->
AHL20(2)
<---------
ANAC58
--------->
AHL20(1)
<---------
ANAC58
------>
MYB46(1)
--------------->
AtSPL3
<---------
MYB59
<---------------
AtSPL3
<-----------
GT1
--------------->
AtSPL8
-------
AHL20(2)
<---------------
AtSPL8
->
GT1
------>
MYB83
----------->
GT1
--------->
DAG2
<
------>
AHL20(2)
--------->
AHL20(2)
--------->
ARR14(2)
--------->
SPL7
------
AHL20(1)
---------->
DOF2
<---------
HSFB2a(2)
---------->
DOF2
--------
----->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------->
GLK1(2)
<---------
ANAC46
------
AHL20(2)
<-----------
GT1
---------->
DOF2
<---------
AHL20(2)
<---------
ARR14(2)
<---------
SPL7
-
aaaattaccaaatattttattaacaaaacaatatgaaaaagaaagaattatataatcgagaaaaatagagaatatggaaaagtagaggcgtacgacaaag
7924200
<---------
AHL20(1)
--------->
AHL20(1)
<---------
At4g35610
<---------
ARR11(3)
--------->
At4g35610
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
ANAC58
----------->
TBP
<---------
ARR11(3)
-
--------->
TOE2(3)
<-----------
TBP
<---------
ARR14(2)
---
--------->
TOE1(3)
--------->
ANAC46
<---------
ATHB12
--------->
ARR14(2)
<----
---------
ARR11(3)
--------->
ANAC58
------------>
CBF
--------->
ARR11(3)
<------
-->
DOF2
--------->
ANAC58
<---------
AHL20(2)
------>
ZmHOX2a(1)
<------
-------->
ARR11(3)
--------->
ANAC58
--------->
AHL20(2)
--------->
TOE2(3)
<------------
CBF
aagaccttaacacacacaattcaagcaatatataaaaaaaaaatccaatctttgttcctcaaaaatcctctgcttcgcgtttttcttcggcattgacttt
7924300
--------->
YAB1
*
TSS
<---------
ATHB12
------>
ZmHOX2a(2)
<---------
GLK1(2)
------>
MYB46(1)
<---------
GLK1(1)
--------->
ARR14(2)
------>
MYB83
--------->
ARR14(2)
<---------
ARR14(2)
-------->
WOX13(1)
<---------
ARR14(2)
--------->
GLK1(1)
--------->
CBF
--------->
LBD16
<---------
CCA1(2)
<----------
DOF2
--------->
GLK1(2)
-------
GT1
<---------
LBD16
--------->
YAB1
<----------
DOF2
<---------
GLK1(2)
---
DAG2
<---------
LBD16
<---------
ICU4
------>
ZmHOX2a(1)
----------->
ARR10
----
DOF2
<----------
DOF2
<---------
ATHB12
<---------
YAB1
<----------
DOF2
accaatcacaactttctccgg
gatcgccgatttatcttcgtttcaacc
atgactc
atatccttttgattctctctttgcttcaatctctttagattctct
7924400
<------
ZmHOX2a(1)
----------------->
AGL3
<---------
TOE2(3)
<---------
ARR14(2)
<---------
AtMYB61
<---------
TOE1(3)
--------->
ARR14(2)
<-
<---------
TOE1(3)
<---------
DOF5.7(2)
--------->
YAB1
------>
NtERF2
<---------
TOE2(3)
---------->
DOF2
<---------
TOE2(3)
<-------
TEIL
<-
gtttctcggccgattgcagaatttagggttttggtttgcagaattaggggttaaagttttcaaatttaggatttgttttgggagaagatgcaattgtagt
7924500
------->
TEIL
------>
ZmHOX2a(2)
--------->
ARR11(3)
<------
ZmHOX2a(2)
<---------
AGP1
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
ARR14(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
GLK1(2)
--------->
ARR14(3)
<---------
ANAC58
<---------
ARR14(2)
<---------
ARR14(3)
<---------
ANAC46
--------->
ARR14(2)
<---------
ARR14(2)
<-----------
RAV1(1)
<---------
GLK1(2)
<---------
WOX13(1)
<---------
AGP1
--------->
HSFB2a(1)
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
--------->
AGP1
--------->
HSFB2a(2)
<---------
TOE2(3)
<---------
HSFB2a(2)
<---------
CCA1(2)
<---------
HSFB2a(2)
===============
HOX2a_HOX2a
--------
ANAC58
----------->
ARR10
--------->
HSFC1(1)
------>
ZmHOX2a(2)
<<
--------
ANAC58
---------->
DOF2
<---------
CCA1(1)
<---------
ARR11(3)
----------->
GT1
ttcgtttctagattgctctgtttgtataaagactagatcttgttggatatttctcgaatgttgcttatggatcttataaggattctgaatttgtgaaact
7924600
--------->
ALFIN1
------->
PIF5
<-------
MYC3
<-------
MYC2
------->
MYC3
------->
MYC2
<-------
PIF5
<---------
bZIP60(2)
<---------
O2
<---------
ANAC46
<---------
ANAC55(2)
--------->
TGA1a
--
<---------
TGA1a
<-
--------->
O2
--
=======================================
bZIP_DOF
<-----------
HVH21
<-
<-----------
TGA1
<-
--------->
YAB1
--------->
At4g35610
<---------
ANAC58
<---------
At4g35610
<---------
AHL20(2)
<---------
ANAC58
--------->
ZAT2
--------->
AHL20(2)
<---------
ANAC55(2)
---------->
DOF2
--
================================================
bZIP_DOF
--------->
At5g28300
<-------
GAMYB
<----------
DOF2
<---------
ANAC46
<---------
WRKY18(1)
----
--------->
ALFIN1
====================================
bZIP_DOF
----------->
HVH21
------
---------->
DOF2
<----------
DOF2
<---------
YAB1
<---------
ARR14(2)
<---------
ANAC58
<-----
<<<<<
ZML2
--------->
TOE2(3)
--------->
ANAC55(2)
<---------
ANAC58
------>
NtERF2
agaacaaagtgtgttgttttctttaattcaagcttttgatttttgatgcgtaatcgtcac
gtggaagtcagagagagcgtgaccgtgaaagagctgccgc
7924700
<-----------
HVH21
------->
GAMYB
>>>>>>>>>
MYB2
<---------
AtMYB61
<------
NtERF2
<---------
ZAT2
--------->
LBD16
--------->
GLK1(2)
----->
MYC3
--------->
DEAR3(1)
<---------
ARR11(1)
------
PIF5
<------
NtERF2
--------->
LBD16
--------->
GLK1(2)
<----------
DOF2
----->
MYC2
--------->
ATERF1(1)
--------->
ARR14(2)
--
------
MYC3
------>
NtERF2
--------->
At5g28300
<---------
ARR14(2)
------
MYC2
<---------
RAP2.3(1)
----------->
GT1
--------->
ARR14(2)
----->
PIF5
--------->
ANAC46
----------->
HVH21
------->
TEIL
<-
-------->
OsbHLH66
----------->
TGA1
<---------
LBD16
---------->
DOF2
--------->
MYB52(1)
<--
>
NtERF2
----------->
GT1
<---------
MYB46(3)
--------->
DEAR3(1)
<---------
ARR14(2)
--------->
MYB52(2)
----
At4g35610
--------->
ICU4
----------->
HVH21
<---------
ANAC46
------->
TEIL
<---------
ARR14(1)
tcgtgctggtggaaagggtaagaatggtgacgatggtttgacgccggagcaacgccgtgaaag
gtataaacgaatctgaaaaaacgaatctttagttggg
7924800
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AGI:
At4g13615.1
Description:
four F5 protein-related / 4F5 protein-related. contains InterPro domain Four F5 protein (InterPro:IPR007513)
Range:
from: 7924322
to: 7925136
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.