Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <----------DOF2                         <---------DAG2                      <-----------GT1                    <---------WOX13(1)                  --------->ATHB12                <---------WOX13(1)              --------->ATHB12         --------->ARR11(3)              --------->ATHB12               ----------->GT1         <---------ARR11(3)         <-----------GT1      ---------->DOF2<----------ID1 -------ID1  <---------YAB1     --------->AHL20(2)---------->DOF2      ------------------------>ANAC81   agacaaaccattatcttcattgatttacttttcattttatacatgatttacataaaacacaaagtacaaagaaaacgaaaaaaaaaaaaaactattcaca  2593700                                                                                              -------                                                                                          ===========                                                                                          ------>ZmHOX2a(2)                                                                                         ============                                                                                         <------ZmHOX2a(2)                                                                                        --------->ARR14(3)                                                                                        <---------ARR14(3)                                                                                        --------->ARR14(2)                                                                                        --------->ARR11(3)                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              <-----------ARR10------                                                                              <---------AGP1  <------                                                                              --------->ARR11(3)  ---                                                                              --------->AGP1---------                                                                              --------->ARR14(2)  ---                                                                              <---------ARR14(2)  <--                                                <---------ANAC58              <---------ARR11(3)-----                                                <---------ANAC58         -------->P     <---------ARR14(2)                             --------->MYB52(1) <---------ANAC46<---------AHL20(2)      <---------ARR11(3)         ------------------------>ANAC81  <---------AtMYB61   <---------YAB1 <---------CCA1(2)-------   gagaaaacaaaaatccaaaactcaaaaacacaaacagaaacgttttggtttcgttttctcatctattattttctcaaccagatctaacaagatccccaac  2593800                                                                 ------>MYB83                                                                 ------>MYB46(1)                                                               <---------MYB111(1)                                                              --------->ANAC58                                                              --------->ANAC58                                                             ----------->RAV1(1)                                                           <------NtERF2                                                           --------->ABI4(1)                                                           <---------SPL7                                                           ------>NtERF2                                                          --------->RAP2.6(2)                                                          --------->RRTF1(2)                                                          --------->DEAR3(1)                                                          --------->RAP2.3(2)                                                         --------->ORA47(2)                                                         <------NtERF2                  <----------DOF2                                                         --------->RAP2.3(1)        =================                                                         --------->ATERF1(1)        ------>ZmHOX2a(2)                                                        <---------ATERF1(1)        <---------GLK1(1)                                                        --------->ABI4(1)          <------ZmHOX2a(2)                                                        ------>NtERF2              --------->GLK1(1)                                                       <---------ATERF1(2)         ==================                                                       <---------DEAR3(1)         <---------ARR14(2) ---->RAV1(1)                                          --------->ANAC46           <---------AGP1 ========================HOX2a_HOX2a                   --------->RAP2.3(3)        <---------ARR14(3) ========================HOX2a_HOX2a                   --------->RAP2.3(2)        --------->ARR14(3) ---->DOF2                                             --------->DEAR3(1)         --------->ARR11(3) ---ALFIN1                   ------>ZmHOX2a(1)        --------->ERF1              <---------ARR11(3) ------>At4g35610       <---------GLK1(2)             --------->DEAR4(2)          --------->AGP1 ---- >LBD16                --------->HSFB2a(1)            --------->ATERF1(1)         <-----------ARR10 ------>ZAT2        ---------->DOF2                   --------->RAP2.3(1)         --------->ARR14(2) -------At4g35610 ------>ZmHOX2a(1)                  <---------ATERF1(1)         <---------CCA1(2) ---->MYB46(3)--------->ORA47(1)                    --------->ANAC46           <---------HSFB2a(2) -->MYB52(1) --------->DEAR3(1)         ---------->CDC5--------->ATERF1(2)     --------->HSFB2a(2) --   agctcagaaacatcaccgtcctcaaagattcctccgcttgcctcagcctctcactcgccgccgcaccaaatcgactcgattccagatctcctttaagcct  2593900                                                         <------ZmHOX2a(2)                                                        <---------ARR14(3)                                                        --------->ARR14(3)    ------>NtERF2                                                        --------->ARR11(3)    <---------At4g35610                                                        <---------ARR11(3)    --------->At4g35610               <---------DEAR3(1)                       <---------ARR14(2)   --------->RAP2.3(2)               --------->DEAR3(1)                       --------->ARR14(2)   --------->DEAR3(1)              <---------------------WRI1                <---------AGP1     ------>NtERF2             ------>NtERF2                              --------->AGP1     <---------ATERF1(1)            --------->DEAR3(1)                         <---------CCA1(2)  --------->ANAC46          ------>NtERF2                               ----------->ARR10   --------->DEAR3(1)         --------->DEAR3(1)                        ------>NtERF2         <---------LBD16       ------>NtERF2                              --------->ATERF1(2) --------->GLK1(1)      --------->DEAR3(1)                          <---------RAP2.6(2) <---------GLK1(1)   --------->DEAR3(1)                             <---------ATERF1(2)------->TEIL   --------->At1g77200                            --------->ANAC46   --------->ARR14(2)   ----------->HVH21             <---------O2    --------->RAP2.6(3) <---------ARR11(1)  --------->DEAR3(2)        --------->REM1(2)  --------->WRKY12      <---------ARR14(2)  --------->MYB46(3)<---------ALFIN1           ----------->HVH21     <-----------ARR10 =====HOX2a_HOX2a  <---------ZAT18        --------->GLK1(2)         <---------CCA1(2) =====HOX2a_HOX2a --------->ANAC58       <---------GLK1(2)------>ZmHOX2a(2)--------->LBD16  --------- ----->bZIP60(2)  --------->ANAC58 ----------->HVH21<------NtERF2   <---------ARR14(1) ----------->GT1 ---->ZmHOX2a(1)------>NtERF2    --------->O2<----------DOF2 ---------->DOF2--------->RAP2.3(1)   cctcaccgacgacgacgacgacgcactctgtggagacgagaccgattctttgacggcagatcttaaagtcgtatctccgccgcttacaccggtaacactc  2594000                                                                        <---------CCA1(1)                                                                        <---------RVE1(1)                                                                       <---------GLK1(2)                                                                     <---------TOE2(3)                                                                  ------>ZmHOX2a(1)                 --------->LBD16                                 --------->TOE2(3)                --------->HSFB2a(2)                              --------->TOE1(3)                <---------HSFB2a(2)                           --------->ARR14(2)              <------               <---------LBD16                                <---------ARR14(2)      <----------DOF2              -------->P                                  <-----------GT1        --------->At4g35610     --------->REM1(1)                               <---------AHL20(2)<---------ARR11(3)    <-------   ------>ZmHOX2a(1)           <---------ATHB12     --------->AHL20(2) --------->ARR11(3)    <------- >ZAT6        --------->MYB52(1)<-----------GT1  --------->YAB1<------ZmHOX2a(2) <---------At4g35610<   ttctccttcatcaacttaccggaaaactgactaatcactctattcatccgattataaaatttccgatccttaagatttttttctgctgatttatggcttt  2594100      --------->LBD16  --------->GLK1(2) <---------GLK1(2) <---------ARR14(2)                                                                           ------- --------->ARR14(2)                                                                        <---------At4g35610 ----DOF2                                        <-----------TBP                           --------->At4g35610 --ANAC58         <-----------GT1                --------->AHL20(2)            --------->ATHB12 --ANAC58        *TSS                  --------->ARR11(3)                     <---------YAB1  ------- ---------At4g35610  <----------DOF2   <---------ARR11(3)             --------->ZAT18    <------ZmHOX2a(1)   tcagattccgaagagagttttttcttttgtgaagagtaagagatgttttgtttatatagacggagaagtgagtgagccatatgatttgggaggagctacc  2594200                                                                      <-------GAMYB                                                                     <---------MYB46(3)                                                                    <---------ANAC46                                                                    <---------DEAR3(1)                                                                    <---------ANAC58                                                                    <---------RAP2.6(2)                                                                    <---------ANAC58                                                                   <------NtERF2                                                                 --------->ALFIN1                                                                 ----------->HVH21                                                                ------->MYC4                                                                <-------MYC4                                                                ------->PIF5                                                                <-------MYC2                                                                <-------PIF5                                                                -------->ABF1                                                                <-------MYC3                                                                ------->MYC2                                                                ------->MYC3                                                               >>>>>>>>>>AtMYC2                  <---                                                               --------->ANAC55(2)               <---                                                               >>>>>>>>>>ABI5                    ----                                                               <---------O2                    <-----                                                               <---------ANAC55(2)             <-----                                                               ===============MYC_MYB ----------->HVH21                                                               ===================bZIP_DOF   <-------                                                               ===================bZIP_DOF <---------                                <--------ATHB1                 ======================================                                --------->ATHB12               --------->TGA1a       --------->HSFB2a(2)                                --------->ATHB51               >>>>>>>>>>HY5     <----------DOF2 <---                         <---------WRKY18(1)                   <---------TGA1a  --------->HSFC1(2)                        ----------->HVH21                      --------->O2     <---------HSFC1(2)                      <---------ANAC58     <-----------RAV1(1) <---------bZIP60(2)   <---------HSFB2a(2)                 --------->LBD16<---------ICU4            ----------->HVH21     <---------HSFB2a(1)       --------->At5g28300     <---------ATHB51     <---------ANAC55(2)         --------->HSFB2a(1)-- ->P  ----------->GT1 <---------ANAC58     <---------ZAT6<---------WOX13(1)  <------ZmHOX2a(1)<------ -->MYB52(1)   <---------LBD16 --------->ICU4       --------->ANAC55(2)<----------DOF2--------->ANAC46   ggtttagacggtaataaaccggaggcttgacgaataattggattactgttggataagtgactgacacgtggcggttttaggaactttcgcgacatgttgg  2594300 ------ANAC58 ------ANAC46                           <-----------GT1                                    <---------ANAC58 ----->ALFIN1                       <---------AHL20(1)                            --------->CCA1(1) < -MYB46(1)                          --------->AHL20(1)                            --------->RVE1(1)<- -MYB83                  <------ZmHOX2a(1) --------->TOE2(3)                 --------->YAB1<---------ANAC46 -P               ------>ZmHOX2a(2) --------->AHL20(2)                     <-----------TBP <---------ANAC58 --RAV1(1)  --------->CCA1(2)       <---------AHL20(2)                ----------->GT1     ---------->ID1 =MYC_MYB  <---------ARR14(2)   <---------CCA1(1)                    --------->DAG2--------->ARR11(3) ------ANAC58 <---------YAB1    <---------RVE1(1)           <---------AHL20(2)  --------->YAB1    <-- ------->ALFIN1   ==============HOX2a_HOX2a<----------DOF2<---------------AGL15<---------YAB1     <-- ---AtMYB61--------->ARR14(2)----------->GT1     <---------AHL20(2) ---------->DOF2<---------ARR11(3)   tgtgggaactgtggatatgatcgaagaggaatggatattttattactttaattcatttttgtttatttggaaaagttatttataatatctgtgtcgtttt  2594400           <---------YAB1         -------->HAHB4         <---------ICU4         --------->YAB1                                                            <---------TOE1(3)        --------->ICU4                                                            --------->MYB52(1)  <---------MYB46(3)                 <---------TOE2(3)                       <---------HSFB2a(2)   <- ---------MYB52(1)    <---------ARR11(3)         <------MYB83                --------->HSFB2a(2)   <- ------GAMYB          --------->ARR11(3)         <------MYB46(1)   <-----------GT1<---------DOF5.7(2) -------ANAC58  --------->YAB1   <----------DOF2--------->MYB59   <---------AHL20(2)             <--- -------ANAC58------->TEIL    <-----------GT1   <---------TOE2(3)--------->AHL20(2)<---------TOE2(3)   ccgttggataattatgaatcataagatgttttttactttgacgaagaaattaggttgtgatgtttcatttaatcgttttctagataacgttttctgtttt  2594500                                                                                 ----------->TBP                                                                               --------->YAB1                                                                    <---------AHL20(2)                                                                  <---------RVE1(1)            <-----                                                                  <---------CCA1(1)        ----------                                                                 <---------ARR11(3)<---------AHL20(2)          <---------ANAC46             --------->DAG2            <---------GLK1(2)--------->YAB1         ---------->ID1            --------->YAB1                --------->ARR11(3)--------->AHL20(2)     <----------DOF2              <---------YAB1          >>>>>>>>>>WRKY38   <-----------TBP -------- --------ANAC58             <----------DOF2       --------->HSFB2a(2)   <-----------GT1   <---------- --------ANAC58   <---------AHL20(2)   <---------TOE2(3)  >>>>>>>>>>WRKY26 --------------->AGL15 --------GT1      --------->AHL20(2)   <---------TOE1(3)  >>>>>>>>>>WRKY43 <---------------AGL15-----   tgcttcactttgtcgtctaatttataaattctttttttgataaggttgtctactcgaatttgaccaagatttttttactatttataaaaatatgtcaatc  2594600  Previous    Next  AGI:  At4g05070.1    Description:  unknown protein Range:  from: 2593593    to: 2594117    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g05071.1    Description:  unknown protein Range:  from: 2594152    to: 2594295    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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