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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<----------
DOF2
<---------
DAG2
<-----------
GT1
<---------
WOX13(1)
--------->
ATHB12
<---------
WOX13(1)
--------->
ATHB12
--------->
ARR11(3)
--------->
ATHB12
----------->
GT1
<---------
ARR11(3)
<-----------
GT1
---------->
DOF2
<----------
ID1
-------
ID1
<---------
YAB1
--------->
AHL20(2)
---------->
DOF2
------------------------>
ANAC81
agacaaaccattatcttcattgatttacttttcattttatacatgatttacataaaacacaaagtacaaagaaaacgaaaaaaaaaaaaaactattcaca
2593700
-------
===========
------>
ZmHOX2a(2)
============
<------
ZmHOX2a(2)
--------->
ARR14(3)
<---------
ARR14(3)
--------->
ARR14(2)
--------->
ARR11(3)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<-----------
ARR10
------
<---------
AGP1
<------
--------->
ARR11(3)
---
--------->
AGP1
---------
--------->
ARR14(2)
---
<---------
ARR14(2)
<--
<---------
ANAC58
<---------
ARR11(3)
-----
<---------
ANAC58
-------->
P
<---------
ARR14(2)
--------->
MYB52(1)
<---------
ANAC46
<---------
AHL20(2)
<---------
ARR11(3)
------------------------>
ANAC81
<---------
AtMYB61
<---------
YAB1
<---------
CCA1(2)
-------
gagaaaacaaaaatccaaaactcaaaaacacaaacagaaacgttttggtttcgttttctcatctattattttctcaaccagat
ctaacaagatccccaac
2593800
------>
MYB83
------>
MYB46(1)
<---------
MYB111(1)
--------->
ANAC58
--------->
ANAC58
----------->
RAV1(1)
<------
NtERF2
--------->
ABI4(1)
<---------
SPL7
------>
NtERF2
--------->
RAP2.6(2)
--------->
RRTF1(2)
--------->
DEAR3(1)
--------->
RAP2.3(2)
--------->
ORA47(2)
<------
NtERF2
<----------
DOF2
--------->
RAP2.3(1)
=================
--------->
ATERF1(1)
------>
ZmHOX2a(2)
<---------
ATERF1(1)
<---------
GLK1(1)
--------->
ABI4(1)
<------
ZmHOX2a(2)
------>
NtERF2
--------->
GLK1(1)
<---------
ATERF1(2)
==================
<---------
DEAR3(1)
<---------
ARR14(2)
---->
RAV1(1)
--------->
ANAC46
<---------
AGP1
========================
HOX2a_HOX2a
--------->
RAP2.3(3)
<---------
ARR14(3)
========================
HOX2a_HOX2a
--------->
RAP2.3(2)
--------->
ARR14(3)
---->
DOF2
--------->
DEAR3(1)
--------->
ARR11(3)
---
ALFIN1
------>
ZmHOX2a(1)
--------->
ERF1
<---------
ARR11(3)
------>
At4g35610
<---------
GLK1(2)
--------->
DEAR4(2)
--------->
AGP1
----
>
LBD16
--------->
HSFB2a(1)
--------->
ATERF1(1)
<-----------
ARR10
------>
ZAT2
---------->
DOF2
--------->
RAP2.3(1)
--------->
ARR14(2)
-------
At4g35610
------>
ZmHOX2a(1)
<---------
ATERF1(1)
<---------
CCA1(2)
---->
MYB46(3)
--------->
ORA47(1)
--------->
ANAC46
<---------
HSFB2a(2)
-->
MYB52(1)
--------->
DEAR3(1)
---------->
CDC5
--------->
ATERF1(2)
--------->
HSFB2a(2)
--
agctcagaaacatcaccgtcctcaaagattcctccgcttgcctcagcctctcactcgccgccgcaccaaatcgactcgattccagatctcctttaagcct
2593900
<------
ZmHOX2a(2)
<---------
ARR14(3)
--------->
ARR14(3)
------>
NtERF2
--------->
ARR11(3)
<---------
At4g35610
<---------
ARR11(3)
--------->
At4g35610
<---------
DEAR3(1)
<---------
ARR14(2)
--------->
RAP2.3(2)
--------->
DEAR3(1)
--------->
ARR14(2)
--------->
DEAR3(1)
<---------------------
WRI1
<---------
AGP1
------>
NtERF2
------>
NtERF2
--------->
AGP1
<---------
ATERF1(1)
--------->
DEAR3(1)
<---------
CCA1(2)
--------->
ANAC46
------>
NtERF2
----------->
ARR10
--------->
DEAR3(1)
--------->
DEAR3(1)
------>
NtERF2
<---------
LBD16
------>
NtERF2
--------->
ATERF1(2)
--------->
GLK1(1)
--------->
DEAR3(1)
<---------
RAP2.6(2)
<---------
GLK1(1)
--------->
DEAR3(1)
<---------
ATERF1(2)
------->
TEIL
--------->
At1g77200
--------->
ANAC46
--------->
ARR14(2)
----------->
HVH21
<---------
O2
--------->
RAP2.6(3)
<---------
ARR11(1)
--------->
DEAR3(2)
--------->
REM1(2)
--------->
WRKY12
<---------
ARR14(2)
--------->
MYB46(3)
<---------
ALFIN1
----------->
HVH21
<-----------
ARR10
=====
HOX2a_HOX2a
<---------
ZAT18
--------->
GLK1(2)
<---------
CCA1(2)
=====
HOX2a_HOX2a
--------->
ANAC58
<---------
GLK1(2)
------>
ZmHOX2a(2)
--------->
LBD16
---------
----->
bZIP60(2)
--------->
ANAC58
----------->
HVH21
<------
NtERF2
<---------
ARR14(1)
----------->
GT1
---->
ZmHOX2a(1)
------>
NtERF2
--------->
O2
<----------
DOF2
---------->
DOF2
--------->
RAP2.3(1)
cctcaccgacgacgacgacgacgcactctgtggagacgagaccgattctttgacggcagatcttaaagtcgtatctccgccgcttacaccggtaacactc
2594000
<---------
CCA1(1)
<---------
RVE1(1)
<---------
GLK1(2)
<---------
TOE2(3)
------>
ZmHOX2a(1)
--------->
LBD16
--------->
TOE2(3)
--------->
HSFB2a(2)
--------->
TOE1(3)
<---------
HSFB2a(2)
--------->
ARR14(2)
<------
<---------
LBD16
<---------
ARR14(2)
<----------
DOF2
-------->
P
<-----------
GT1
--------->
At4g35610
--------->
REM1(1)
<---------
AHL20(2)
<---------
ARR11(3)
<-------
------>
ZmHOX2a(1)
<---------
ATHB12
--------->
AHL20(2)
--------->
ARR11(3)
<-------
>
ZAT6
--------->
MYB52(1)
<-----------
GT1
--------->
YAB1
<------
ZmHOX2a(2)
<---------
At4g35610
<
ttctccttcatcaacttaccggaaaactgactaatcactctattcat
ccgattataaaatttccgatccttaagatttttttctgctgatttatggcttt
2594100
--------->
LBD16
--------->
GLK1(2)
<---------
GLK1(2)
<---------
ARR14(2)
-------
--------->
ARR14(2)
<---------
At4g35610
----
DOF2
<-----------
TBP
--------->
At4g35610
--
ANAC58
<-----------
GT1
--------->
AHL20(2)
--------->
ATHB12
--
ANAC58
*
TSS
--------->
ARR11(3)
<---------
YAB1
-------
---------
At4g35610
<----------
DOF2
<---------
ARR11(3)
--------->
ZAT18
<------
ZmHOX2a(1)
tcagattccgaagagag
ttttttcttttgtgaagagtaagagatgttttgt
ttatatagacggagaagtgagtgagccatatgatttgggaggagctacc
2594200
<-------
GAMYB
<---------
MYB46(3)
<---------
ANAC46
<---------
DEAR3(1)
<---------
ANAC58
<---------
RAP2.6(2)
<---------
ANAC58
<------
NtERF2
--------->
ALFIN1
----------->
HVH21
------->
MYC4
<-------
MYC4
------->
PIF5
<-------
MYC2
<-------
PIF5
-------->
ABF1
<-------
MYC3
------->
MYC2
------->
MYC3
>>>>>>>>>>
AtMYC2
<---
--------->
ANAC55(2)
<---
>>>>>>>>>>
ABI5
----
<---------
O2
<-----
<---------
ANAC55(2)
<-----
===============
MYC_MYB
----------->
HVH21
===================
bZIP_DOF
<-------
===================
bZIP_DOF
<---------
<--------
ATHB1
======================================
--------->
ATHB12
--------->
TGA1a
--------->
HSFB2a(2)
--------->
ATHB51
>>>>>>>>>>
HY5
<----------
DOF2
<---
<---------
WRKY18(1)
<---------
TGA1a
--------->
HSFC1(2)
----------->
HVH21
--------->
O2
<---------
HSFC1(2)
<---------
ANAC58
<-----------
RAV1(1)
<---------
bZIP60(2)
<---------
HSFB2a(2)
--------->
LBD16
<---------
ICU4
----------->
HVH21
<---------
HSFB2a(1)
--------->
At5g28300
<---------
ATHB51
<---------
ANAC55(2)
--------->
HSFB2a(1)
--
->
P
----------->
GT1
<---------
ANAC58
<---------
ZAT6
<---------
WOX13(1)
<------
ZmHOX2a(1)
<------
-->
MYB52(1)
<---------
LBD16
--------->
ICU4
--------->
ANAC55(2)
<----------
DOF2
--------->
ANAC46
ggtttagacggtaataaaccggaggcttgacgaataattggattactgttggataagtgactgacacgtggcggttttaggaactttcgcgacat
gttgg
2594300
------
ANAC58
------
ANAC46
<-----------
GT1
<---------
ANAC58
----->
ALFIN1
<---------
AHL20(1)
--------->
CCA1(1)
<
-
MYB46(1)
--------->
AHL20(1)
--------->
RVE1(1)
<-
-
MYB83
<------
ZmHOX2a(1)
--------->
TOE2(3)
--------->
YAB1
<---------
ANAC46
-
P
------>
ZmHOX2a(2)
--------->
AHL20(2)
<-----------
TBP
<---------
ANAC58
--
RAV1(1)
--------->
CCA1(2)
<---------
AHL20(2)
----------->
GT1
---------->
ID1
=
MYC_MYB
<---------
ARR14(2)
<---------
CCA1(1)
--------->
DAG2
--------->
ARR11(3)
------
ANAC58
<---------
YAB1
<---------
RVE1(1)
<---------
AHL20(2)
--------->
YAB1
<--
------->
ALFIN1
==============
HOX2a_HOX2a
<----------
DOF2
<---------------
AGL15
<---------
YAB1
<--
---
AtMYB61
--------->
ARR14(2)
----------->
GT1
<---------
AHL20(2)
---------->
DOF2
<---------
ARR11(3)
tgtgggaactgtggatatgatcgaagaggaatggatattttattactttaattcatttttgtttatttggaaaagttatttataatatctgtgtcgtttt
2594400
<---------
YAB1
-------->
HAHB4
<---------
ICU4
--------->
YAB1
<---------
TOE1(3)
--------->
ICU4
--------->
MYB52(1)
<---------
MYB46(3)
<---------
TOE2(3)
<---------
HSFB2a(2)
<-
---------
MYB52(1)
<---------
ARR11(3)
<------
MYB83
--------->
HSFB2a(2)
<-
------
GAMYB
--------->
ARR11(3)
<------
MYB46(1)
<-----------
GT1
<---------
DOF5.7(2)
-------
ANAC58
--------->
YAB1
<----------
DOF2
--------->
MYB59
<---------
AHL20(2)
<---
-------
ANAC58
------->
TEIL
<-----------
GT1
<---------
TOE2(3)
--------->
AHL20(2)
<---------
TOE2(3)
ccgttggataattatgaatcataagatgttttttactttgacgaagaaattaggttgtgatgtttcatttaatcgttttctagataacgttttctgtttt
2594500
----------->
TBP
--------->
YAB1
<---------
AHL20(2)
<---------
RVE1(1)
<-----
<---------
CCA1(1)
----------
<---------
ARR11(3)
<---------
AHL20(2)
<---------
ANAC46
--------->
DAG2
<---------
GLK1(2)
--------->
YAB1
---------->
ID1
--------->
YAB1
--------->
ARR11(3)
--------->
AHL20(2)
<----------
DOF2
<---------
YAB1
>>>>>>>>>>
WRKY38
<-----------
TBP
--------
--------
ANAC58
<----------
DOF2
--------->
HSFB2a(2)
<-----------
GT1
<----------
--------
ANAC58
<---------
AHL20(2)
<---------
TOE2(3)
>>>>>>>>>>
WRKY26
--------------->
AGL15
--------
GT1
--------->
AHL20(2)
<---------
TOE1(3)
>>>>>>>>>>
WRKY43
<---------------
AGL15
-----
tgcttcactttgtcgtctaatttataaattctttttttgataaggttgtctactcgaatttgaccaagatttttttactatttataaaaatatgtcaatc
2594600
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AGI:
At4g05070.1
Description:
unknown protein
Range:
from: 2593593
to: 2594117
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At4g05071.1
Description:
unknown protein
Range:
from: 2594152
to: 2594295
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.