Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->AHL20(2)                                         <---------ANAC46                          <---------AHL20(2)                              --------->TOE2(3)                                   --------->AHL20(2)                   <-----------GT1     <---------ANAC46                        --------->AHL20(2)            <---------At4g35610     <-----------RAV1(1)                      --------->TOE2(3)      --------->AHL20(2)      --------->TOE1(3)                             <---------ANAC55(2)   <--      <---------AHL20(2)    <---------TOE1(3)      ----------->GT1     ----------->GT1           ----     --------->AHL20(2)    <---------DOF5.7(2)<---------ATHB12  <---------ANAC46  <---------AHL20(2)   caattcatttatttatctgatataccagttaaccttaaatgttgtgtaatcagtcgtaaaattgttttgtgtaatgttacataaattaatagaatcaaat  921100                        --------->bZIP60(1)                        ----------->GT1                     ----------->HVH21                   --------->ICU4              -------->HAHB4                             <---------YAB1              <---------ICU4                           <---------ICU4              --------->YAB1             --------->AHL20(2)             <---------ATHB51      --------->MYB52(1) <---------YAB1             --------->ICU4       --------->TOE1(2) --------->YAB1          <---------YAB1<---------bZIP60(1)    <---------YAB1 -------AHL20(2)     ----------->TGA1 ----------->GT1 --------->ICU4 ----->AHL20(2) <---------YAB1   --------->MYB46(3)<-------TEIL                          <----------ID1   ttaaaatgtgttctaattatgctatgacgttataaacaaacgataaattccgattcatgattatgaagtatttcaattgaaaacacaaaaatcgacaaaa  921200                  <-----------GT1                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              --------->ARR11(3)              <---------ARR11(3)                                   ---------->DOF2              --------->AGP1                                     ------>ZmHOX2a(1)              <---------AGP1                                  <-----------------AGL1             <---------CCA1(2)                       <---------AHL20(2)       --------->AHL20(2)                           --------->AHL20(1)                             <-       --------->AHL20(1)                           --------->AHL20(2)                             --       <---------AHL20(1)                           <---------AHL20(2)                            ---     --------->AHL20(1)                   ---------->DOF2 <---------ANAC58                    -------     <---------AHL20(1)                --------->ETT(1)   <---------ANAC58                  ---------     <---------ARR11(3)  --------->ANAC55(2)        <---------AHL20(1)                     <---------TOE2(3)     --------->ARR11(3)  <---------ANAC55(2) ----------->GT1  ---------->ID1           <---------At4g35610   ttttaaaaatattttagatcttacattacatacctgtattgtcgcaaaggaaaatttatttcttgtcctaaaaggccatttggaacttgagctaatgtaa  921300                                                                                                  <--                                                                                                  <--                                                                                             <-------                                                                                            ---------  <---------AHL20(2)                      <---------ANAC46                              <---------ARR14(2)  --------->AHL20(2)                     <---------TOE2(3)                              --------->GLK1(2) --------AHL20(1)     ------>ZmHOX2a(1)--------->WRKY12 <---------HSFB2a(1)             --------->ARR14(2) ------->AHL20(1)<---------ANAC58      ----------->HVH21--------->HSFC1(2)             <---------GLK1(1) ------>AHL20(2) <---------ANAC58    <----------DOF2    <---------HSFC1(2)            <------ZmHOX2a(1) -->AHL20(2)--------->ATHB12   <---------ANAC58        --------->ANAC58             <---------TOE2(3) -->GT1    <----------DOF2     <---------ANAC58        --------->ANAC58   <---------MYB52(1)---------   atatataaatgggcttattgggtcctctaatgggcttgcctttgacgtagaagacagaagcatcgttgtgactcccgtttgtgatttaggaatccgcact  921400                     <-----------GT1     <---------MYB52(1) <----------DOF2    <---------RAP2.6(3) <---------DAG2                                             ------>ZmHOX2a(2)  ---------->ID1   <---------DAG2                                                 <------ZmHOX2a(2) -------ANAC58     <----------DOF2     --------->ANAC58                          --------->ARR11(3) -------ANAC58  <-----------GT1        --------->ANAC58                          <---------ARR11(3) --ALFIN1   <---------MYB52(1)      --------->ARR14(2)                       --------->MYB52(1) >LBD16   <---------ANAC58          <---------ARR14(2)*TSS---------->DOF2   ----------->HVH21 >ZAT18   <---------ANAC58 ------------>CBF       ---------->ID1          ----------->RAV1(2)   gcttgccgttttccgtttctactttacttttcaattcagaaacgcctctctcgtcgtcttcaaagctaaattagaaacctgacgatctctctctctctct  921500                                       ------>ZmHOX2a(2)                                      --------->At4g35610                                     <-----------ARR10                                     <---------ARR11(3)                                     --------->ARR11(3)                                     <---------AGP1                                     --------->GLK1(2)                                     --------->ARR14(2)                                     <---------ARR14(2)                                    ================================HOX2a_HOX2a                                    <------ZmHOX2a(1)                                <------MYB83                                <------MYB46(1)                             <---------ANAC58                               --------->MYB111(2)                          <---------ANAC46                              <--------P                          <------MYB46(1)                             <-------GAMYB                    --------->ATHB12                            --------->MYB55(2)               ------>ZmHOX2a(2)                            <---------MYB46(3)              <---------------------WRI1        ----------->GT1<----------DOF2<------ZmHOX2a(2)  <---------YAB1     <---------ANAC58<--------       ====================================HOX2a_HOX2a<-------TEIL<---------MYB46(3)        <--------       ------>ZmHOX2a(2)   <---------TOE2(3)       --------->ICU4 <------MYB83           <---------MYB52(1)   ctctctcgatcggataatatttgagctttgtggttggaggatctgagttagtcatgttcatgatcgattggttctatggcgttctcgcttcgttagggtt  921600                          --------->HSFB2a(2)                          <---------HSFB2a(2)                         <---------LBD16                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                --------->ARR14(3)                <---------ARR14(3)                --------->ARR11(3)                --------->AGP1                <---------ARR14(2)                <---------AGP1                --------->ARR14(2)                --------->MYB46(3)    ---------->DOF2      <---------ANAC46       <-----------GT1       ---------->DOF2 -TOE1(3)       <---------ARR11(3)         ----------->GT1 <-----------HVH21               <--------- -TOE2(3)     ----------->ARR10      ---------->DOF2     --------->At4g35610     <-------TEIL  <-----   atggcagaaagaggctaagatcttgtttctgggactcgataatgctggtaaaaccactctgcttcacatgttgaaagacgaggttcgctctcactttctt  921700     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   <---------ARR14(2)   --------->AGP1   --------->ARR14(2)   <---------AGP1   <-----------ARR10   --------->ARR11(3)   <---------ARR11(3)               --------->TOE1(3)                                               -  <---------CCA1(2)                 <---------DAG2                                                 <- -DOF2<----------DOF2               --------->TOE2(3)                 <---------LBD16             <-- ----YAB1             <------ZmHOX2a(2)       ------>ZmHOX2a(2)  <---------YAB1  ----------->GT1<----   attcagatctttcttatctaatcgatccaattccctaaccttattcgatctccaattttgtttttatatgattctggattagatgcttaaatttgattta  921800              <---------ANAC46              <---------ANAC58         <-----------GT1        <---------ZAT14        --------->ZAT18        --------->ZAT14                             <----------DOF2 --------->At4g35610                               <---------ANAC58 <---------At4g35610                               <---------ANAC58                                <- -------->GLK1(2)                            <---------YAB1  ------>ZmHOX2a(2)                    <-- --------GLK1(2)                             <---------AHL20(2)                                   <-- ----ZmHOX2a(1)<----------DOF2        <---------ANAC46--------->MYB52(1)                         <--- -----TOE2(3) <---------ANAC58------>ZmHOX2a(1) <---------WOX13(1)                  ----------->GT1<-   ggaatctgagtttactgcttgaattttgagtccttgagtagtgtgttttaattgcttaactgatcgataatcgaacatggttgaattggtgaaacagaga  921900                                                                                  <-----------HVH21                                                                                 <------MYB83                                                                                <---------AtMYB61                                                                                --------->ALFIN1                    --------->ZAT2                                            <---------ANAC46        --------->At4g35610                                                   <---------ANAC58  --------->SPL7--------->ANAC46                                              <---------ANAC58<------ -----MYB83--------->At4g35610       --------->ARR11(3)                 --------->ATHB12      <------ -------------AtSPL8--------->At4g35610                                <---------YAB1      <---------WOX13(1) -------------AtSPL3<---------At4g35610          ----------->GT1    <----------DOF2   <---------At4g35610 ------WOX13(1) --------->ANAC58     <---------ARR11(3)         <---------TOE2(3)<------MYB46(1) -----MYB46(1)  --------->ANAC58     <-----------ARR10          <---------TOE1(3)<---------MYB46(3)<-   ttggtacagcatcagcctacgcagcatccaacttctgaagaactcagcattgggaaaatcaagtttaaggcttttgatttgggtggtcaccagattgctc  922000  Previous    Next  AGI:  At4g02080.1    Description:  ASAR1 (Arabidopsis thaliana secretion-associated RAS super family 2); GTP binding. Identical to GTP-binding protein SAR1A (SAR1A) [Arabidopsis Thaliana] (GB:O04834;GB:O04747;GB:O04748;GB:O04835;GB:Q42142;GB:Q96296); similar to GTP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G62560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44889.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain GTP-binding protein SAR1; (InterPro:IPR006687) Range:  from: 921454    to: 922777    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version