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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
<---------
ANAC46
<---------
AHL20(2)
--------->
TOE2(3)
<---------
AHL20(2)
<-----------
GT1
<---------
ANAC46
--------->
AHL20(2)
<---------
At4g35610
<-----------
RAV1(1)
--------->
TOE2(3)
--------->
AHL20(2)
--------->
TOE1(3)
<---------
ANAC55(2)
<--
<---------
AHL20(2)
<---------
TOE1(3)
----------->
GT1
----------->
GT1
----
--------->
AHL20(2)
<---------
DOF5.7(2)
<---------
ATHB12
<---------
ANAC46
--------->
AHL20(2)
caattcatttatttatctgatataccagttaaccttaaatgttgtgtaatcagtcgtaaaattgttttgtgtaatgttacataaattaatagaatcaaat
921100
<---------
bZIP60(1)
----------->
GT1
----------->
TGA1
<---------
YAB1
-------->
HAHB4
--------->
ICU4
<---------
ICU4
<---------
ICU4
--------->
YAB1
--------->
AHL20(2)
--------->
ICU4
--------->
MYB52(1)
<---------
YAB1
<---------
ATHB51
--------->
TOE1(2)
--------->
YAB1
<---------
YAB1
--------->
bZIP60(1)
<---------
YAB1
-------
AHL20(2)
----------->
HVH21
----------->
GT1
--------->
ICU4
----->
AHL20(2)
<---------
YAB1
--------->
MYB46(3)
<-------
TEIL
<----------
ID1
ttaaaatgtgttctaattatgctatgacgttataaacaaacgataaattccgattcatgattatgaagtatttcaattgaaaacacaaaaatcgacaaaa
921200
<-----------
GT1
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
---------->
DOF2
--------->
AGP1
------>
ZmHOX2a(1)
<---------
AGP1
---------->
ID1
<---------
CCA1(2)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(1)
--
<---------
AHL20(1)
<---------
AHL20(1)
<-
--------->
AHL20(2)
<---------
AHL20(2)
---
<---------
AHL20(1)
---------->
DOF2
<---------
ANAC58
-------
<---------
ARR11(3)
--------->
ETT(1)
<---------
ANAC58
---------
--------->
ARR11(3)
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
TOE2(3)
--------->
AHL20(1)
<---------
ANAC55(2)
----------->
GT1
<-----------------
AGL1
<---------
At4g35610
ttttaaaaatattttagatcttacattacatacctgtattgtcgcaaaggaaaatttatttcttgtcctaaaaggccatttggaacttgagctaatgtaa
921300
<--
<--
<-------
---------
--------->
AHL20(2)
<---------
ANAC46
<---------
ARR14(2)
<---------
AHL20(2)
<---------
TOE2(3)
--------->
GLK1(2)
------->
AHL20(1)
------>
ZmHOX2a(1)
--------->
WRKY12
--------->
HSFC1(2)
--------->
ARR14(2)
--------
AHL20(1)
<---------
ANAC58
----------->
HVH21
<---------
HSFC1(2)
<---------
GLK1(1)
------>
AHL20(2)
<---------
ANAC58
<----------
DOF2
<---------
HSFB2a(1)
<------
ZmHOX2a(1)
-->
AHL20(2)
--------->
ATHB12
<---------
ANAC58
--------->
ANAC58
<---------
TOE2(3)
-->
GT1
<----------
DOF2
<---------
ANAC58
--------->
ANAC58
<---------
MYB52(1)
---------
atatataaatgggcttattgggtcctctaatgggcttgcctttgacgtagaagacagaagcatcgttgtgactcccgtttgtgatttaggaatccgcact
921400
<-----------
GT1
<---------
MYB52(1)
<----------
DOF2
<---------
RAP2.6(3)
<---------
DAG2
------>
ZmHOX2a(2)
---------->
ID1
<---------
DAG2
<------
ZmHOX2a(2)
-------
ANAC58
<----------
DOF2
--------->
ANAC58
--------->
ARR11(3)
-------
ANAC58
<-----------
GT1
--------->
ANAC58
<---------
ARR11(3)
--
ALFIN1
<---------
MYB52(1)
--------->
ARR14(2)
--------->
MYB52(1)
>
ZAT18
<---------
ANAC58
<---------
ARR14(2)
*
TSS
---------->
DOF2
----------->
HVH21
>
LBD16
<---------
ANAC58
------------>
CBF
---------->
ID1
----------->
RAV1(2)
gcttgccgttttccgtttctactttacttttcaattcagaaacgcctctctcg
tcgtcttcaaagctaaattagaaacctgacgatctctctctctctct
921500
------>
ZmHOX2a(2)
--------->
At4g35610
<-----------
ARR10
<---------
ARR11(3)
--------->
ARR11(3)
<---------
AGP1
--------->
GLK1(2)
--------->
ARR14(2)
<---------
ARR14(2)
================================
HOX2a_HOX2a
<------
ZmHOX2a(1)
<------
MYB83
<------
MYB46(1)
<---------
ANAC58
--------->
MYB111(2)
<---------
ANAC46
<--------
P
<------
MYB46(1)
<-------
GAMYB
--------->
ATHB12
--------->
MYB55(2)
------>
ZmHOX2a(2)
<---------
MYB46(3)
<---------------------
WRI1
----------->
GT1
<----------
DOF2
<------
ZmHOX2a(2)
<---------
YAB1
<---------
ANAC58
<--------
====================================
HOX2a_HOX2a
<-------
TEIL
<---------
MYB46(3)
<--------
------>
ZmHOX2a(2)
<---------
TOE2(3)
--------->
ICU4
<------
MYB83
<---------
MYB52(1)
ctctctcgatcggataatatttgagctttgtggttggaggatctgagttagtc
atgttcatgatcgattggttctatggcgttctcgcttcgttagggtt
921600
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
LBD16
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(3)
<---------
ARR14(3)
--------->
ARR11(3)
--------->
AGP1
<---------
ARR14(2)
<---------
AGP1
--------->
ARR14(2)
--------->
MYB46(3)
---------->
DOF2
<---------
ANAC46
<-----------
GT1
---------->
DOF2
-
TOE1(3)
<---------
ARR11(3)
----------->
GT1
<-----------
HVH21
<---------
-
TOE2(3)
----------->
ARR10
---------->
DOF2
--------->
At4g35610
<-------
TEIL
<-----
atggcagaaagaggctaagatcttgtttctgggactcgataatgctggtaaaaccactctgcttcacatgttgaaagacgag
gttcgctctcactttctt
921700
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
AGP1
--------->
ARR14(2)
<---------
AGP1
<-----------
ARR10
--------->
ARR11(3)
<---------
ARR11(3)
--------->
TOE1(3)
-
<---------
CCA1(2)
<---------
DAG2
<-
-
DOF2
<----------
DOF2
--------->
TOE2(3)
<---------
LBD16
<--
----
YAB1
<------
ZmHOX2a(2)
------>
ZmHOX2a(2)
<---------
YAB1
----------->
GT1
<----
attcagatctttcttatctaatcgatccaattccctaaccttattcgatctccaattttgtttttatatgattctggattagatgcttaaatttgattta
921800
<---------
ANAC46
<---------
ANAC58
<-----------
GT1
<---------
ZAT14
--------->
ZAT18
--------->
ZAT14
<----------
DOF2
--------->
At4g35610
<---------
ANAC58
<---------
At4g35610
<---------
ANAC58
<-
-------->
GLK1(2)
<---------
YAB1
------>
ZmHOX2a(2)
<--
--------
GLK1(2)
<---------
AHL20(2)
<--
----
ZmHOX2a(1)
<----------
DOF2
<---------
ANAC46
--------->
MYB52(1)
<---
-----
TOE2(3)
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
WOX13(1)
----------->
GT1
<-
ggaatctgagtttactgcttgaattttgagtccttgagtagtgtgttttaattgcttaactgatcgataatcgaacatggttgaattggtgaaacag
aga
921900
<-----------
HVH21
<------
MYB83
<---------
AtMYB61
--------->
ALFIN1
--------->
ZAT2
<---------
ANAC46
--------->
At4g35610
<---------
ANAC58
--------->
SPL7
--------->
ANAC46
<---------
ANAC58
<------
-----
MYB83
--------->
At4g35610
--------->
ARR11(3)
--------->
ATHB12
<------
-------------
AtSPL8
--------->
At4g35610
<---------
YAB1
<---------
WOX13(1)
-------------
AtSPL3
<---------
At4g35610
----------->
GT1
<----------
DOF2
<---------
At4g35610
------
WOX13(1)
--------->
ANAC58
<---------
ARR11(3)
<---------
TOE2(3)
<------
MYB46(1)
-----
MYB46(1)
--------->
ANAC58
<-----------
ARR10
<---------
TOE1(3)
<---------
MYB46(3)
<-
ttggtacagcatcagcctacgcagcatccaacttctgaagaactcagcattgggaaaatcaagtttaaggcttttgatttgggtggtcaccagattgctc
922000
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AGI:
At4g02080.1
Description:
ASAR1 (Arabidopsis thaliana secretion-associated RAS super family 2); GTP binding. Identical to GTP-binding protein SAR1A (SAR1A) [Arabidopsis Thaliana] (GB:O04834;GB:O04747;GB:O04748;GB:O04835;GB:Q42142;GB:Q96296); similar to GTP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G62560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44889.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain GTP-binding protein SAR1; (InterPro:IPR006687)
Range:
from: 921454
to: 922777
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.