Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->DEAR3(1)                ------>NtERF2             --------->ZAT2             --------->At4g35610                              --------->ZAT6        <----------DOF2                                     ----------->RAV1(1)       <---------ANAC58                                 --------->PCF2       <---------ANAC58                                <---------PCF2   <----------DOF2  <---------ALFIN1                  <---------ANAC58  <---------ANAC58<---------ALFIN1                    <------MYB83  <---------ANAC58----------->RAV1(1)                 <---------ANAC58 -------P    <---------ZAT2<----------DOF2            <------MYB46(1)                    ----------->RAV1(1) -------ANAC58  <-----------HVH21                    <---------MYB46(3)       ------>NtERF2      <--- -------ANAC58 >>>>>>>>>AtERF-4                      --------->MYB59        <---------ANAC58     <--- ------MYB46(3)>>>>>>>>>AtERF-3                  <---------MYB46(3)         <---------ANAC58     ---- ->ATHB12    <---------At4g35610              <-----------RAV1(1) ----------->GT1------>ZmHOX2a(1)   ggttgctttgctttgagctgccacagcctcttttagtttacaaggattgtgttgttgggtcccaacactagtgaaattgcctcctattttcccacagaga  23434700                     ------->MYC2                     <-------MYC4                     <-------MYC2                     <-------PIF5                     ------->PIF5                     <-------MYC3           <-----------GT1          <-----------GT1                                         <---------DAG2       ----------------------->TaNAC69(2)                         ------>ZmHOX2a(1)      <---------RVE1(1)                                           <----------DOF2     <---------ARR11(3)                                        <---------ATHB12     --------->ARR11(3)                                       ------>MYB83     <---------At4g35610  --------->ANAC58   ------->MYC3<----------DOF2        <------ZmHOX2a(1)  <----------DOF2  --------->ANAC58  --------->ANAC58               --------->CCA1(2)  <-----------GT1   ---------->DOF2 ------ZAT14        --------->ANAC58        --------->ANAC58  ------>MYB46(1)  --------->At4g35610 ------ZAT18       <---------TOE1(2)        --------->ANAC58--------->AtMYB61  ----------->RAV1(2) ----->ZAT18  --------------------->WRI1   <---------LBD16 --------->MYB46(3)--------->REM1(1)    ---   gcacaaggattttttcccttgcacgttccaccattcttttactctcacggatgatacaggaaccaatcctttttgcgcttcatctgagtcaaaagcctga  23434800                                                                                              ------>ZmHOX2a(1)                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                          <---------ARR14(2)                                                                                          --------->GLK1(2)                                                                                    --------->DAG2                                                                                   ---------->DOF2                                                                               --------->AHL20(2)                              --------->ANAC58      ----------->GT1           <---------AHL20(2)                              --------->ANAC58------>MYB46(1)                 --------->AHL20(2)         --------->AHL20(2)  --------->DAG2   ------>MYB83              ----------->GT1   --------->ARR14(2)    ----------->RAV1(1)     ---------->DOF2 --------->TOE2(2)           <------ZmHOX2a(1)<---------GLK1(1) ------->DOF2           --------->TOE2(3)   --------->TOE1(2)          ----------->GT1   --------->GLK1(1)   aaaagaccacatataatacatctcagcctaaaaagcaaataccatacctacgactggaaacatatgggataagaggataaataaataaagggaatccttc  23434900                                                                      <---------MYB46(3)                                                                     <---------ANAC46                                                          <----------ID1                            -           ---------->DOF2                        <----------DOF2<---------GLK1(2)                 --   <--------P             <---------TOE2(3)  <----------DOF2   --------->ICU4                      <- ----------->GT1          <---------TOE1(3) <---------DAG2--------->ANAC58                ----------- ---------AGL15      <---------ZAT6------>ZmHOX2a(2)      --------->ANAC58             ---------->DOF2 -------->AGL15   --------->DAG2 <---------ARR11(3)      --------->DAG2              --------->YAB1<- ----------AGL3  ---------->DOF2 --------->ARR11(3)     ---------->DOF2             <---------YAB1 --   aaatggtaagtttcaaagtaaaagtgttatggtatgatcttgtctgccttttctttgaaaaagccaagattgtgggtgtaactgttatcaaaagataaaa  23435000           <----------DOF2          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        --------->AGP1        --------->ARR11(3)        <---------ARR11(3)  <---------ANAC58                                                      ---------->DOF2  <---------ANAC46                                                   ----------->RAV1(1)  <---------ANAC58                                                   ------>NtERF2 <-------TEIL  <----------DOF2                           <---------ANAC58 -------->CCA1(2)                                        <---------ANAC58   ---------->DOF2 ------->ARR11(1)         <----------DOF2         <---------DAG2    --------->DEAR3(1) --------ARR14(2) <---------ANAC58                <----------DOF2 ------>NtERF2 >GT1 ----------->ARR10   <---------DAG2       ------>ZmHOX2a(1)  --------->LBD16                ---- --------GLK1(2)  <---------ANAC46            <---------ALFIN1   --------->ANAC46             ------- ------->ARR14(2) <---------ANAC58          <---------ATERF1(1) <---------LBD16          <------NtERF2   agattcgtgagatctttctttcttgtgactttttccttcaactaggctcctcctttatggcttctctccgccaacaaagaaagggagaggcctcaactat  23435100                                                                                          <---------AHL20(2)                                                                                  <---------AHL20(2)-                                                                                 <---------AHL20(2) <                                                                       --------->ZAT6     --------->AHL20(2)                           <---------ICU4      <---------ANAC58        --------->ANAC46  <---------AHL20(2)              <----------DOF2  <-----------------AGL1   ------>NtERF2<-----------GT1  --------->AHL20(2)      --------->YAB1      <---------ATHB12     <---------ANAC58   --------->GLK1(1)   <---------AHL20(2)    <-----------TBP   ------------>CBF        <------MYB83  --------->AtLEC2 <----------DOF2  ------- ------>DOF2  <---------MYB52(1)*TSS          <------MYB46(1) --------->YAB1 <---------DAG2   <------ -->YAB1 <-----------GT1--------->WOX13(1)    <---------MYB46(3)  <---------GLK1(1)  <---------AHL20(2)   aaagctatttataaccctttgttagacaatcagtccccattcggagattggttgcctcggccattcagaaatcacactacttttttatttatttatttat  23435200                                                                                           <------ZmHOX2a(1)                                                                                        <-----------RAV1(2)                                                                                        <---------LBD16                                                                                --------->ANAC58                                                                                --------->ANAC58           <---------DAG2                                                       --------->ANAC46 <------ZmHOX2a(2)                                                          --------->ANAC58 -------->ARR11(3)    <---------TOE2(2)           <---------ATHB12          --------->AtLEC2 ---------ARR11(3)    <---------TOE1(2)---------->ARF1                      --------->ANAC58 -->YAB1   <----------DOF2    --------->ZAT14   --------->GLK1(1)           --------->ANAC46 -------- ---AHL20(2)        --------->TOE2(3)  <---------CCA1(2)          --------->At4g35610  ------>ZmHOX2a(1)   aagatcaaaaacccttttccatccttggtttctatactcttgtctctcagaaatcaagaggccttatgagctatctacatgcaagcctcctcaggaaaag  23435300                                         <-------TEIL                                      --------->ZAT2                                      <---------At4g35610     <---------At4g35610                ----                                      --------->At4g35610  <---------ANAC58                     <----                               <---------ANAC58            <---------ANAC46      --------->ARR14(2)     <---------YAB1  <-----------GT1  <---------ZAT2       <---------ANAC58      <---------ARR14(2) -->DOF2 --------->YAB1        <---------ANAC58  <----------DOF2 <---------At4g35610   <----------DOF2   aaccatgcttatagtaagaagtttcaccatcttgcttctcagctgcatagcctttaagttggcttgctgcttctctagcagcatttcttctttgaaggcg  23435400                                                 <---------ARR11(3)                               <--                                                 --------->ARR11(3)                           -------                                                 <---------GLK1(2)                            <------                                          ------>NtERF2                                       -------                                      --------->ANAC46                                       <-------         --------->ANAC58             --------->ANAC58                                       <-------         --------->ANAC58             --------->ANAC58                            <---------RAP2.6(2) <-----------------AGL1             <---------ALFIN1                         <---------MYB52(1)   --- ----->ATERF1(1)                  <-----------HVH21      <---------GLK1(1)   <----------DOF2 -------- -----ATERF1(1)                  --------->WOX13(1)      --------->GLK1(1)------>ZmHOX2a(2)  --------   cttcccctagtaggccatttggagtttgaacatgtccatcacgcctccaaagattttggaaatcgataccagttgatccctttggcggtcttacatccca  23435500          --------->bZIP60(1)          <---------bZIP60(1)       ----------->HVH21     --------->ANAC58     --------->ANAC58                                     <---------ZAT2 -------ARR14(2)                   <---------HSFB2a(2)    --------->At4g35610 ---------->AG                     --------->HSFB2a(2)    <---------At4g35610 ---------AGL15              <---------ALFIN1          <---------At5g28300      <---------ANAC46 ---------->AGL1          --------->ANAC58       <---------ATHB12               <---------ANAC58 ----------AG             --------->ANAC46      --------->ANAC58                <---------ANAC58 ----------AGL1           --------->ANAC58      --------->ANAC58               --------->ALFIN1 ------>ARR14(2)         --------->SPL7      <---------ZAT18           --------->At4g35610 --------->AGL1         --------->CCA1(2)    --------->ZAT18           <------NtERF2        --------- --------->AGL2      --------->ANAC46   --------->ATHB12  --------->ZAT2    <---------AtMYB61   aatcggtaagcgacatcgcctcaacgatacgacacatctggatgatgggcactcattcacagcttacagtggcagcgagaggtcgtggacattcactcca  23435600  Previous    Next  AGI:  At3g63445.1    Description:  other RNA Range:  from: 23433753    to: 23437337    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g63440.1    Description:  ATCKX6/ATCKX7/CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6); cytokinin dehydrogenase. similar to ATCKX1/CKX1 (CYTOKININ OXIDASE/DEHYDROGENASE 1), cytokinin dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G41510.1); similar to hypothetical protein OsI_019040 [Oryza sativa (indica cultivar-group)] (GB:EAY97807.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40733.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23642.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain FAD-linked oxidase-like, C-termin Range:  from: 23435132    to: 23437511    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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