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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
DEAR3(1)
------>
NtERF2
--------->
ZAT2
--------->
At4g35610
--------->
ZAT6
<----------
DOF2
----------->
RAV1(1)
<---------
ANAC58
--------->
PCF2
<---------
ANAC58
<---------
PCF2
<----------
DOF2
<---------
ALFIN1
<---------
ANAC58
<---------
ANAC58
<---------
ALFIN1
<------
MYB83
<---------
ANAC58
----------->
RAV1(1)
<---------
ANAC58
-------
P
<---------
ZAT2
<----------
DOF2
<------
MYB46(1)
----------->
RAV1(1)
-------
ANAC58
<-----------
HVH21
<---------
MYB46(3)
------>
NtERF2
<---
-------
ANAC58
>>>>>>>>>
AtERF-4
--------->
MYB59
<---------
ANAC58
<---
------
MYB46(3)
>>>>>>>>>
AtERF-3
<---------
MYB46(3)
<---------
ANAC58
----
->
ATHB12
<---------
At4g35610
<-----------
RAV1(1)
----------->
GT1
------>
ZmHOX2a(1)
ggttgctttgctttgagctgccacagcctcttttagtttacaaggattgtgttgttgggtcccaacactagtgaaattgcctcctattttcccacagaga
23434700
------->
MYC2
<-------
MYC4
<-------
MYC2
<-------
PIF5
------->
PIF5
<-------
MYC3
<-----------
GT1
<-----------
GT1
<---------
DAG2
----------------------->
TaNAC69(2)
------>
ZmHOX2a(1)
<---------
RVE1(1)
<----------
DOF2
<---------
ARR11(3)
<---------
ATHB12
--------->
ARR11(3)
------>
MYB83
<---------
At4g35610
--------->
ANAC58
------->
MYC3
<----------
DOF2
<------
ZmHOX2a(1)
<----------
DOF2
--------->
ANAC58
--------->
ANAC58
--------->
CCA1(2)
<-----------
GT1
---------->
DOF2
------
ZAT14
--------->
ANAC58
--------->
ANAC58
------>
MYB46(1)
--------->
At4g35610
------
ZAT18
<---------
TOE1(2)
--------->
ANAC58
--------->
AtMYB61
----------->
RAV1(2)
----->
ZAT18
--------------------->
WRI1
<---------
LBD16
--------->
MYB46(3)
--------->
REM1(1)
---
gcacaaggattttttcccttgcacgttccaccattcttttactctcacggatgatacaggaaccaatcctttttgcgcttcatctgagtcaaaagc
ctga
23434800
------>
ZmHOX2a(1)
<------
-------
<-------
<---------
ARR14(2)
--------->
GLK1(2)
--------->
DAG2
---------->
DOF2
--------->
AHL20(2)
--------->
ANAC58
----------->
GT1
<---------
AHL20(2)
--------->
ANAC58
------>
MYB46(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
DAG2
------>
MYB83
----------->
GT1
--------->
ARR14(2)
----------->
RAV1(1)
---------->
DOF2
--------->
TOE2(2)
<------
ZmHOX2a(1)
<---------
GLK1(1)
------->
DOF2
--------->
TOE2(3)
--------->
TOE1(2)
----------->
GT1
--------->
GLK1(1)
aaaagaccacatataatacatctcagcctaaaaagcaaataccatacctacgactggaaacatatgggataagaggataaataaataaagggaatccttc
23434900
<---------
MYB46(3)
<---------
ANAC46
<----------
ID1
-
---------->
DOF2
<----------
DOF2
<---------
GLK1(2)
--
<--------
P
<---------
TOE2(3)
<----------
DOF2
--------->
ICU4
<-
----------->
GT1
<---------
TOE1(3)
<---------
DAG2
--------->
ANAC58
-----------
---------
AGL15
<---------
ZAT6
------>
ZmHOX2a(2)
--------->
ANAC58
---------->
DOF2
-------->
AGL15
--------->
DAG2
<---------
ARR11(3)
--------->
DAG2
--------->
YAB1
<-
----------
AGL3
---------->
DOF2
--------->
ARR11(3)
---------->
DOF2
<---------
YAB1
--
aaatggtaagtttcaaagtaaaagtgttatggtatgatcttgtctgccttttctttgaaaaagccaagattgtgggtgtaactgttatcaaaagataaaa
23435000
<----------
DOF2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
AGP1
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ANAC58
---------->
DOF2
<---------
ANAC46
----------->
RAV1(1)
<---------
ANAC58
------>
NtERF2
<-------
TEIL
<----------
DOF2
<---------
ANAC58
-------->
CCA1(2)
<---------
ANAC58
---------->
DOF2
------->
ARR11(1)
<----------
DOF2
<---------
DAG2
--------->
DEAR3(1)
--------
ARR14(2)
<---------
ANAC58
<----------
DOF2
------>
NtERF2
>
GT1
----------->
ARR10
<---------
DAG2
------>
ZmHOX2a(1)
--------->
LBD16
----
--------
GLK1(2)
<---------
ANAC46
<---------
ALFIN1
--------->
ANAC46
-------
------->
ARR14(2)
<---------
ANAC58
<---------
ATERF1(1)
<---------
LBD16
<------
NtERF2
agattcgtgagatctttctttcttgtgactttttccttcaactaggctcctcctttatggcttctctccgccaacaaagaaagggagaggcctcaactat
23435100
<---------
AHL20(2)
<---------
AHL20(2)
-
<---------
AHL20(2)
<
--------->
ZAT6
--------->
AHL20(2)
<---------
ICU4
<---------
ANAC58
--------->
ANAC46
<---------
AHL20(2)
<----------
DOF2
<-----------------
AGL1
------>
NtERF2
<-----------
GT1
--------->
AHL20(2)
--------->
YAB1
<---------
ATHB12
<---------
ANAC58
--------->
GLK1(1)
<---------
AHL20(2)
<-----------
TBP
------------>
CBF
<------
MYB83
--------->
AtLEC2
<----------
DOF2
-------
------>
DOF2
<---------
MYB52(1)
*
TSS
<------
MYB46(1)
--------->
YAB1
<---------
DAG2
<------
-->
YAB1
<-----------
GT1
--------->
WOX13(1)
<---------
MYB46(3)
<---------
GLK1(1)
<---------
AHL20(2)
aaagctatttataaccctttgttagacaatc
agtccccattcggagattggttgcctcggccattcagaaatcacactacttttttatttatttatttat
23435200
<------
ZmHOX2a(1)
<-----------
RAV1(2)
<---------
LBD16
--------->
ANAC58
--------->
ANAC58
<---------
DAG2
--------->
ANAC46
<------
ZmHOX2a(2)
--------->
ANAC58
-------->
ARR11(3)
<---------
TOE2(2)
<---------
ATHB12
--------->
AtLEC2
---------
ARR11(3)
<---------
TOE1(2)
---------->
ARF1
--------->
ANAC58
-->
YAB1
<----------
DOF2
--------->
ZAT14
--------->
GLK1(1)
--------->
ANAC46
--------
---
AHL20(2)
--------->
TOE2(3)
<---------
CCA1(2)
--------->
At4g35610
------>
ZmHOX2a(1)
aagatcaaaaacccttttccatccttggtttctatactcttgtctctcagaaatcaagaggcctt
atgagctatctacatgcaagcctcctcaggaaaag
23435300
<-------
TEIL
--------->
ZAT2
<---------
At4g35610
<---------
At4g35610
----
--------->
At4g35610
<---------
ANAC58
<----
<---------
ANAC58
<---------
ANAC46
--------->
ARR14(2)
<---------
YAB1
<-----------
GT1
<---------
ZAT2
<---------
ANAC58
<---------
ARR14(2)
-->
DOF2
--------->
YAB1
<---------
ANAC58
<----------
DOF2
<---------
At4g35610
<----------
DOF2
aaccatgcttatagtaagaagtttcaccatcttgcttctcagctgcatagcctttaagttggcttgctgcttctctagcagcatttcttctttgaaggcg
23435400
<---------
ARR11(3)
<--
--------->
ARR11(3)
-------
<---------
GLK1(2)
<------
------>
NtERF2
-------
--------->
ANAC46
<-------
--------->
ANAC58
--------->
ANAC58
<-------
--------->
ANAC58
--------->
ANAC58
<---------
RAP2.6(2)
<-----------------
AGL1
<---------
ALFIN1
<---------
MYB52(1)
---
----->
ATERF1(1)
<-----------
HVH21
<---------
GLK1(1)
<----------
DOF2
--------
-----
ATERF1(1)
--------->
WOX13(1)
--------->
GLK1(1)
------>
ZmHOX2a(2)
--------
cttcccctagtaggccatttggagtttgaacatgtccatcacgcctccaaagattttggaaatcgataccagttgatccctttggcggtcttacatccca
23435500
--------->
bZIP60(1)
<---------
bZIP60(1)
----------->
HVH21
--------->
ANAC58
--------->
ANAC58
<---------
ZAT2
-------
ARR14(2)
<---------
HSFB2a(2)
--------->
At4g35610
---------->
AG
--------->
HSFB2a(2)
<---------
At4g35610
---------
AGL15
<---------
ALFIN1
<---------
At5g28300
<---------
ANAC46
---------->
AGL1
--------->
ANAC58
<---------
ATHB12
<---------
ANAC58
----------
AG
--------->
ANAC46
--------->
ANAC58
<---------
ANAC58
----------
AGL1
--------->
ANAC58
--------->
ANAC58
--------->
ALFIN1
------>
ARR14(2)
--------->
SPL7
<---------
ZAT18
--------->
At4g35610
--------->
AGL1
--------->
CCA1(2)
--------->
ZAT18
<------
NtERF2
---------
--------->
AGL2
--------->
ANAC46
--------->
ATHB12
--------->
ZAT2
<---------
AtMYB61
aatcggtaagcgacatcgcctcaacgatacgacacatctggatgatgggcactcattcacagcttacagtggcagcgagaggtcgtggacattcactcca
23435600
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AGI:
At3g63445.1
Description:
other RNA
Range:
from: 23433753
to: 23437337
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At3g63440.1
Description:
ATCKX6/ATCKX7/CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6); cytokinin dehydrogenase. similar to ATCKX1/CKX1 (CYTOKININ OXIDASE/DEHYDROGENASE 1), cytokinin dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G41510.1); similar to hypothetical protein OsI_019040 [Oryza sativa (indica cultivar-group)] (GB:EAY97807.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40733.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23642.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain FAD-linked oxidase-like, C-termin
Range:
from: 23435132
to: 23437511
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.