Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------YAB1                                                        --------->AHL20(2)                                                     --------->TOE2(3)                                                    -------->ATHB1                                                    <---------ICU4                                                    --------->ATHB12                    >>>>>>>>>ARR2                   --------->YAB1 -------->DAG2     --------->ATHB12     <----------DOF2 <---------AHL20(2)    <---------AtLEC2 -------->DOF2    <---------YAB1        <---------DAG2<---------YAB1     <----------DOF2 --TEIL       <---------DAG2 --------->ATHB12       <--------HAHB4      <---------DAG2           <--- -->CCA1(2)<-----------GT1  <---------YAB1         <---------ATHB12  <-----------GT1 --------->AHL20(2)   aaaaagaggcatataaccttttgattgtatatgatttgaaaactttttcttgaatcattaaaatagcttaattaccttttgcataaataaactaaaatta  22390400                           <---------ARR11(3)                           <---------ARR11(1)                           --------->ARR14(2)                  <---------AHL20(1)                  --------->AHL20(2)                  <---------AHL20(2)               <---------ICU4               --------->YAB1               <--------ATHB1               --------->ATHB51               <--------HAHB4--------->TOE1(3)              <---------ATHB12              <---------ATHB51         <---------ICU4       <---------DAG2          <-------TEIL    <---------CCA1(2)           --------->YAB1   --------->ZAT6 --------GT1  --------->ICU4 --------->TOE2(3)------>ZmHOX2a(1)  <-----------GT1   tacgattttagatgcaataattaattccaaatcttaaaacatcatttcctcataagtcataaccttttaacttacacttgtaattttgttcaacatggat  22390500                                                     --------->TOE1(2)                                                    --------->ANAC55(2)                  --------->AHL20(2)                <---------ANAC55(2)          --------->GLK1(2)                        ------->TEIL          --------->ARR14(2)                       <-------TEIL          <---------ARR14(2)                       --------->SPL7          <---------ARR11(1)                      --------->SPL1(1)          ------->TEIL                           <---------SPL7         <---------ARR14(1)                     <---------ANAC58         <---------GLK1(2)                    ------>MYB83      ------>ZmHOX2a(2)                       -------->P     <------ZmHOX2a(2)         <---------ATHB12 <---------ANAC58     --------->CCA1(2)       ------>MYB46(1)--------->MYB46(3)    <---------ARR14(2)       ------>MYB83   <---------MYB46(2)    --------->AGP1--------->ICU4<---------ICU4--------->MYB52(1)            <-----------GT1    --------->ARR14(2)     <---------MYB111(1)------>MYB46(1)        <---------AHL20(2)   --------->GLK1(1)       <---------MYB59  <---------MYB59         <---------AHL20(2)   <---------GLK1(1)      --------->ANAC55(2)--------->MYB55(1)     --------->AHL20(2)------->TEIL  ----------->ARR10     <-----------GT1 ----------->HVH21  ------->TEIL  ----------->GT1   tactgagatccgaatctgaaatatttatacctaatcaatactctgacctaccgtacgtatgaaactgtatttaaattgttactacatgaacatgatatag  22390600                                                                   <---------YAB1                <---                                                                  --------->TOE2(3)              ----                                                                 <---------ICU4                 <----                                                                 --------->YAB1               ------>MYB83                                                                 --------->ATHB12           <--------                                                                 <--------HAHB4             <--------                               <--------P                       ----------------->AGL3      <--------               --------->AHL20(2)    <---------YAB1             <---------YAB1             --------->ANAC55(2)          <---------TOE2(3) <---------TOE2(2)                   <---------ATHB12      <---------TOE2(3)         <-----------GT1    <---------TOE2(3)             --------->DAG2              <--------------      --------->YAB1     --------->ANAC58                ---------->DOF2              <--------------     <---------YAB1      --------->ANAC58           --------->AHL20(2)     --------->MYB52(1) ------>MYB46(1)    <---------AHL20(2)   --------->ANAC46           <---------AHL20(2)---------->DOF2 ---------------    --------->AHL20(2) --------->ANAC46     --------->MYB46(3)  --------->ICU4        ---------------   aactatttttataacgatataatacacacgaaggttagtaagattaacaaacatttaaataaagtaatcattaaaagaaacgacgatgaaggtacctaat  22390700   --------->TOE2(3) ------ICU4 ----->YAB1 -----ATHB12 -MYB59                   --------->TOE2(3) -MYB111(1)               --------->TOE1(3) -MYB46(2)        ----------->TBP -AtSPL3      ----------->GT1 -AtSPL8    <---------ANAC46                                                    *TSS >AtSPL3    <---------ANAC58                 <-----------HVH21                 --------->WRKY38(1) >AtSPL8    <---------ANAC58                <----------DOF2                ------>ZmHOX2a(1)        <   cgttacattagaaggcttgtatataaaacctcaacaaaacctctccctttcacttcatcacttcaagtcttctcttcctcgttgatcaaacattttcaag  22390800                                                                    <---------ICU4                                                                  --------->ARR11(3)                                                          <---------LBD16                                                       --------->HSFC1(2)                                                       --------->HSFB2a(1)                                                       <---------HSFB2a(1)             --------->TOE2(3)                         <---------HSFC1(2)      <---------------------WRI1                     <---------ARR14(2)          --------->YAB1     --------->LBD16                                 --------->ARR14(2)    --------->YAB1     ------>NtERF2                                  <------ZmHOX2a(1)<----------DOF2    <---------LBD16                  <-----------GT1=======================HOX2a_HOX2a             --   <---------LBD16                <----------DOF2--------->HSFB2a(2)------>ZmHOX2a(2)              -- ----------DOF2         <---------MYB52(1)       --------->LBD16  <---------ARR11(3)               --   tactttccggcgaaacatcaatggccgtttcgaattctttaacaatctctccgaggaaactccggtctgatctttactcatactcataccaaaacaattc  22390900                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                              <------                                                                                              <------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           ------>NtERF2                                                                                           <---------ATERF1(1)                                                                                           <---------RAP2.3(1)                                                                                           --------->LBD16                                                                                          --------->ANAC46                                                                                          <---------DEAR3(1)                                                                                         <---------LBD16                                                                              <----------DOF2 <------                                                                           --------->ARR11(3)<-------                                        ==============================HOX2a_HOX2a <---------ANAC58  -                                   <---------WOX13(1)                      <---------ARR11(3)--------                                 --------->ATHB12                       <------NtERF2   ============= ------->ANAC46            <-----------TGA1         --------->ANAC58   --------->LBD16  ============= ------->ANAC58            <-----------HVH21        --------->ANAC58 <---------LBD16    ------>ZmHOX2a(1) ------->ANAC58           --------->YAB1------>ZmHOX2a(2)      <------ZmHOX2a(1)  <---------ANAC58<--   caagacacctctggttatctctgttctatcgtcactgattgatcgaactctgactcgaaacgagaggattagccggagagctttgccttcctccggcgcc  22391000 <------NtERF2 ------ATERF1(1) ------DEAR3(2) -----ATERF1(2) ---->ATERF1(2)          --------->LBD16 ---->DEAR3(1)           ------>NtERF2 -----DEAR3(1)          --------->LBD16                                          ---------->DOF2 --->ATERF1(1)      <---------WOX13(1)                                         --------->ANAC46 -NtERF2           <---------ANAC58                                          --------->ZAT6 ---RAP2.6(1)      <---------ANAC58                                         --------->ZAT14 ---RAP2.3(1)     --------->ATHB12                                          <-------TEIL ---RRTF1(1)   <----------DOF2                                              <---------ZAT14 ---ATERF1(1) ------>ZmHOX2a(2)                                             <---------ZAT18 >ERF1      --------->AGP1                                                <---------MYB52(1) >RAP2.6(1) --------->ARR14(2)                                           --------->LBD16 >RRTF1(1)  <---------AGP1                                              --------->HSFB2a(2) >ATERF1(1) <---------ARR14(2)                                          <---------HSFB2a(2) >RAP2.3(1) <---------ARR11(3)                                          --------------->AtSPL8 ---ERF1  ----------->ARR10  <---------GLK1(1)                         <---------LBD16 --DEAR3(1) --------->ARR11(3)                      --------->YAB1    <-----------GT1 ----->NtERF2<------ZmHOX2a(2)                     <---------ATHB12<---------HSFC1(2) ->DEAR3(1)<---------CCA1(2) --------->GLK1(1)------>MYB46(1)      <---------HSFB2a(1) ====================HOX2a_HOX2a              ------>MYB83         --------->HSFC1(2)            <--- ===================HOX2a_HOX2a          <-----------GT1          <---------KAN4(2)         ------>ZmHOX2a(1) -------MYB52(1) <---------YAB1    --------->LBD16<-----------HVH21--------->HSFB2a(1)  <---------MYB52(1)   ggtggcaaaactcagatctttgattgccgagaaatccctgatatgaccatccagtcatacctagggagaattttccggtacactaaagccggtccttcgg  22391100                --------->ETT(2)         <---------ANAC58         <---------ANAC46         <---------ANAC58        <------NtERF2      <---------RAP2.6(2)                                                                           <   --------->ALFIN1                           --------->LBD16                                    ---- <---------ANAC46            --------->ARR14(2)                                                  <--- --------->ANAC55(2)         <---------ARR14(2)--------->LBD16                                  ----- <---------ANAC58      <---------WRKY18(1)   <---------LBD16                                  ------- <---------ANAC55(1)  --------->WRKY12    ------>MYB46(1)                               <---------ICU4 <---------ANAC58     ----------->HVH21 --------->AtMYB61                ------->TEIL--------->YAB1-- <---------ANAC55(2)  --------->WRKY38(1) ------>MYB83               <---------TOE2(3)  --------->ZAT6 -------DOF2    <---------ETT(2) <-----------HVH21      --------->GLK1(2)<-------TEIL<---------ICU4<-   tttacgtggtggcttatgtctacattgaccggttctgtcaaaccaatcccggttttagaatcagtctcactaatgtacatcgtctactcatcactaccat  22391200   ------>ZmHOX2a(2) ---------ICU4 ----->YAB1                             --------->YAB1 ------ICU4            <---------ARR14(2)                                             <---------TOE2(3) ---->ICU4             --------->ARR11(3)                                             <---------TOE1(3) -->YAB1               --------->ARR14(2)                                             <---------YAB1 ------->ICU4          <---------ARR11(3)                    ---------->DOF2 <-----------GT1   <----- --------YAB1 <-------TEIL       --------->GLK1(2)    <-----------GT1 --------->ANAC55(2) <-------TEIL   catgatcgcttctaaatacgtcgaagatttgtaagtatctaataaaaacttcaatttaaccaaaaaagtcttacatatttttctatttaagattcatttt  22391300  Previous    Next  AGI:  At3g60550.1    Description:  CYCP3;2 (cyclin p3;2); cyclin-dependent protein kinase. Identical to Cyclin-U2-2 (CYCU2-2) [Arabidopsis Thaliana] (GB:Q9M205); similar to CYCP3,1 (cyclin p3,1), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT2G45080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70609.1); contains InterPro domain Cyclin-related 2 (InterPro:IPR013922); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Negative regulatory factor PREG (InterPro:IPR012389) Range:  from: 22390780    to: 22391616    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version