Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                             --------                                                                                             --------                                                                                            <-------TEIL                                                                                           --------->CCA1(2)                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                          --------->ARR11(1)                                                                                        ----------->ARR10                      --------->GLK1(2)                                                <--------P          <------ZmHOX2a(1)                                                          --------->LBD16       --------->At4g35610   <---------ANAC58        --------->LBD16                --------->LBD16     <-----------RAV1(2)     <---------ANAC58       --------->HSFB2a(2)            <---------LBD16    <---------At4g35610   ------>ZmHOX2a(1)  <---------At4g35610             <-----------ARR10   <-----------HVH21  <---------ARR14(2)     --------->At4g35610     --------->TOE2(3)<---------MYB52(1) <-------TEIL   <---------YAB1       <----------DOF2<---------HSFB2a(2)      --------->ARR14(2)     <   cgatgcatcagaggagttatgaagaatcctagcgagtctcttttgtctgctactccagaaattcttcacatcgttatcagttcttcccggtagatacgta  22354100                                                            --------->At4g35610                                                            <---------ZAT2                                                            <---------At4g35610                              ----------->GT1               --------->ZAT2                     ------>MYB46(1)           <---------ZAT18 --------->GLK1(2)   ------>MYB83              --------->ZAT14    --------->ARR11(3) --ANAC55(2)       <---------MYB46(2)    --------->YAB1   <-----------RAV1(2) ->ANAC46       <-----------GT1         <---------ATHB12<-----------HVH21 ->ANAC55(2) <---------MYB46(3)  <-----------GT1 ------>ZmHOX2a(1)<---------ARR11(3)               -- ---------GLK1(2)  <---------MYB59    --------->WOX13(1)<-----------TGA1   --------->MYB46(3)      --   gcgattctcgcccatttgttaccaaactcagattgtaactcaatcacagtcctctcttcgtcagccgagaacttgcatccactataaacaaacacaaaaa  22354200                                                            <------ZmHOX2a(1)                                                           ----------->GT1                                                   ---------->DOF2         <----------DOF2 ------->TOE1(3)                                ----------->RAV1(1)        <---------DAG2 ------->TOE2(3)                               <----------ID1----------->GT1     <---------TOE2(3)   accctaaatttgaagcaaacaaaaccaaaattgaatttgcagagagagagcaacaaagagaaggagaaaaatgtatactttttgagattgggacggagtt  22354300                                 <-------GAMYB                                <---------ANAC58                                <---------ANAC58                                <---------ANAC46                               <-------TEIL                             <-------PIF5                             <---------MYB52(1)                      --------->YAB1                             ------->PIF5                           <---------ATHB12                            <---------DEAR3(2)                    --------->WOX13(1)                           --------->ATERF1(2)               --------->GLK1(1)                           <---------DEAR3(1)        =============================HOX2a_HOX2a                           <---------ATERF1(2)       ------>ZmHOX2a(2)     <------ZmHOX2a(1)    <----              --------->ANAC46 --------->ABI4(2)  XXXXXXXXXXXXXXXXXXXX>MIR319C         ----------->HVH21      ------>MYB83         <---------DREB2C(2)    XXXXXXXXXXXXXXXXXXXX>MIR319A/B  <---------CCA1(2)      --------->MYB52(1)  <---------LBD16         XXXXXXXXXXXXXXXXXXXX>MIR159A   ------->TEIL  <-----      ------>MYB46(1)--------->ARR14(2)          XXXXXXXXXXXXXXXXXXXX>MIR159B    --------->ARR14(2)    <---------MYB55(2)<---------GLK1(1)          XXXXXXXXXXXXXXXXXXXX>MIR159C    <---------ARR14(2)    --------->MYB46(3)--------->GLK1(1)       <----------DOF2--------->At4g35610 <---------ARR11(1)   --------->ANAC46  <---------ARR14(2)    <---------ARR11(3)<---------At4g35610<---------CCA1(2) <-----------GT1    <------ZmHOX2a(1)      --------->ARR11(3)<---------GLK1(1)  <---------ARR14(1)   tattgacccaacgaagacgacaggatttgccggtgcgttgaagaagacctttggatcgaatggagctccaatcacgaggaccgtatctcttgacatggtt  22354400                                 <----------DOF2                              ------->TEIL                     --------->GLK1(1)                                             ------>ZmHOX2a(2)< -----MYB46(3)       <----------DOF2 <----------DOF2                ======================HOX2a_HOX2a ---P     ---------->ID1 <---------AtLEC2                           ------>ZmHOX2a(1)       <--------   gatgagtacttcgtcttcttcggctttccatggacctttctttatctcttccttcttcgcttccattttcctcatcgctaatcgatctctctctcgattt  22354500                                                                  <-------GAMYB                                                                <---------ANAC46                                                           <------MYB46(1)                                                           <------MYB83                                                         <--------P                                     <----------DOF2    <-------GAMYB                                <---------HSFB2a(1)    <---------DEAR3(2)                                --------->HSFC1(2)     --------->MYB55(2)                                --------->HSFB2a(1)    <---------MYB46(3)                            --------->LBD16           <---------RAP2.6(2)                          --------->ZAT18             <---------ANAC58                          <---------LBD16             <---------DEAR3(1)                          --------->At4g35610         <---------DREB2C(2)                         --------->ALFIN1             <---------ANAC46                    --------->ANAC46                       <---------ANAC58               <---------ANAC58     ----------->RAV1(1)     --       ---------->ID1  <---------ANAC58             ------------>AtMYB77   <---------ALFIN1        -- ------------------------ANAC81 <---------HSFC1(2) --------->ALFIN1       --------->MYB46(3) <------- ----------------ANAC81<---------ANAC46     <-----------TBP<---------MYB46(3)     <---------YAB1<----   tgtgtttttgttcttctctgtttttgtgtgcggaagtttctttgggttttgtagtggcggttggatgcggttatcacccacattaccattaccctccact  22354600         <---------ALFIN1       <---------ALFIN1      <---------ZAT18    --------->ANAC58    --------->ANAC58    --------->ANAC46   --------->SPL7                                            ----------->HVH21 ------------->AtSPL8                                ---------->DOF2     --------->YAB1 ------------->AtSPL3                             <---------MYB59    <---------YAB1            <----- --ALFIN1--------->ANAC46                      <-----------GT1     ----------->GT1          <-------- ------DOF2                             <---------TOE2(3)  ----------->RAV1(2)    ---------->DOF2   ttcagtaccccactccccaagtttctctcgcatttcgaatttgatgttattaccaaaatgcccctgatgttgtaattagaattacaaagcccaaatcatg  22354700                                                                    --------->HSFB2a(2)                                                                ------>ZmHOX2a(2)                                                               <---------HSFB2a(1)                                                               <---------GLK1(1)                                                               <------ZmHOX2a(2)                                                              --------->ARR11(3)                                                              --------->ARR14(2)                                                              --------->ARR14(3)                                                              <---------ARR14(3)                                                              <---------ARR11(3)                                       ----------->GT1        <---------ARR14(2)          --------->REM1(2)        <---------ARR14(2)         <-----------ARR10       <---------ANAC46            --------->ARR14(2)   ----------->HVH21    <---------ZAT2             <-------TEIL           <---------ANAC46                            --- ----ANAC55(2)               ------->MYC3      --------->AHL20(2)   <---------HSFB2a(2)           <-- -ATHB12--------->LBD16      <-------MYC3 ----------->GT1    <------ZmHOX2a(1)       ---------->DOF2   tgagccagcccgtgtaaggccctctatttcacatgcatatatggtggaaaaaaatgatgtgaaggatcttcgagactcgagagccttgaaagttgaaact  22354800                                                       <---------ZAT2                          <-----                                                       <---------At4g35610                    <------                                                       --------->ZAT2                       ---------                                                       --------->At4g35610                  <--------                                                   <------ZmHOX2a(1)                     <---------ICU4        <-----------GT1                           --------->ANAC46                       --------->YAB1 ------->TEIL                                 <-----------GT1                           --------->ICU4 ------>ANAC55(2)  <---------At5g28300     <---------ICU4         ---------->DOF2     --------->YAB1 -------ANAC55(2) <-----------GT1    --------->GLK1(2) <---------------------WRI1  ----------->GT1   acgtatttagataccgtattttacagcaaatgtagaaagaatcaatttttacaggacagctgtccaaacaaaggccagacaaactcagtaataatcagga  22354900                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                   --------->MYB59                                                                                ------->TEIL                                                                         --------->AHL20(2) -ZmHOX2a(1)                                                         <---------AHL20(2) ---YAB1                              <---------At5g28300 <----------ID1 <---------AHL20(2) >YAB1                    --------->ATHB12        <------ZmHOX2a(1)  --------->AHL20(2)   --------->MYB46(3) -ICU4  <----------DOF2 <----------DOF2   ---------->DOF2<------ZmHOX2a(1)<---------AHL20(2)   tagtatatgactttgcacattgaattctttattggacatttaccgaaaggaaggagggaggagacaaatttttaaataaatgaatttggtaaaccactaa  22355000  Previous    Next  AGI:  At3g60460.1    Description:  DUO1 (DUO POLLEN 1); DNA binding / transcription factor. similar to MYB97 (myb domain protein 97), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G26930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70568.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 22353404    to: 22354466    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version