Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <-------TEIL                                                                                       <-------TEIL                                                                                      --------->ARR14(1)                                                                                      --------->CCA1(2)                                                                 <---------ANAC58    <---------ARR14(2)                                                           <---------MYB46(3)        --------->ARR14(2)                                                          <---------MYB52(1)         <---------GLK1(2)                                                         <-------GAMYB        --------->ANAC58                                                     ------>ZmHOX2a(2)        --------->ANAC58                                                    <------ZmHOX2a(2)      <------ZmHOX2a(2)                                                   <---------ARR11(3)     --------->ARR11(3)               <-----------GT1                     --------->ARR11(3)     <---------ARR11(3)     ----        ----------->RAV1(1)                       ------->GAMYB  <---------ANAC58  ----------->ARR10   agttcatcaacaacatttttcagtctggacttatcttcaacctctctctcaacgatctcggttgttttcgtctcgagatcacgctcagatacgttcgcac  20205200                                                                                           --------->YAB1                                                                                          <---------YAB1                                                                                        --------->YAB1                                                                                   <---------AHL20(2)                                                            --------->TOE2(3)      <---------YAB1                                                           --------->YAB1        <---------RVE1(1)                                                          <---------ATHB12       <---------CCA1(1)                                 <---------GLK1(2)  --------->GLK1(2)           <---------ARR11(3)   ---------->DOF2      ---------->DOF2            <---------GLK1(2)            --------->ARR11(3) ------>DOF2 --------->ANAC46---------->DOF2  <-----------GT1             --------->At4g35610   aaagtaaaagactctacaaaacattgaaaagaaaagaaactctgtttataacagattccaaacatcaaatgtgagcatcagagatattattcatcatacc  20205300                                --------->GLK1(2)                               --------->ARR11(3)                               <---------ARR11(3)                               --------->ARR14(2)                               <---------GLK1(2)                               <---------ARR14(2)                              <---------HSFB2a(1)                              --------->HSFC1(2)                              <---------HSFC1(2)          --------------->AtSPL3                         >>>>>>>>>TBF1         <-----------HVH21                   <---------HSFC1(1)          <-----------TGA1                   --------->HSFB2a(2)        --------->bZIP60(2)                   --------->HSFC1(1)        ------>ZmHOX2a(1)                            --------->ARR14(2)                   <---------------AGL15 <---------SPL7   --------------->AtSPL8          <---------ARR14(2)                   <---------HSFB2a(2) ---------->ID1     --------->ZAT6  ---------->DOF2 <---------MYB52(1)           <---------ARR11(3) --------->HSFB2a(1)         --------->YAB1--------->ANAC46<---------MYB46(3)           --------->ARR11(3)----------->ARR10--------->ANAC46  <---------ALFIN1--------->At4g35610   ttgaggcttcgaagaactcttctagaagaagaagattcttcgtcgtcctcgtcagagctatcagtaccacttccactgaagcagttgcatcggttacgaa  20205400                                             --------->ZAT18                              ==================================HOX2a_HOX2a          <---------WOX13(1)  ===============================HOX2a_HOX2a                           --         >>>>>>>>>ARR2        ------>ZmHOX2a(2)          ------>ZmHOX2a(1)                         <-        --------->ATHB12     ===================================HOX2a_HOX2a                        <-       <---------YAB1        ================================HOX2a_HOX2a                           --     --------------------->WRI1 ------>ZmHOX2a(1)     ------>ZmHOX2a(1)                     <--------     <----------DOF2         <------ZmHOX2a(2)     ------>MYB46(1)                          ---------   ------->TEIL             --------->ARR14(2)     ------>MYB83                             --------- <---------ZAT14            <---------GLK1(2)<---------ZAT18              <---------DEAR3(2)<-------- --------->ZAT14            <---------ARR14(2)   --------->AtMYB61    <---------ZAT2       <---------KAN4(2) <---------ZAT18            <---------ARR11(3)   <---------ALFIN1     --------->ZAT2  <---------LBD16   caatgcactttgattgtttctcactgtctggatcctcgatatagttctgcaccatcctcctcaaacagaccgagctcggttcgatttcttcggaattttc  20205500                                                                                    ---------->ID1                                                                                <-------GAMYB                                                                           <---------DEAR3(1)                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                       --------->ARR14(2)  ---------->DOF2                                                      <---------ARR11(3) ------->HSFC1(1)                                                      <---------ARR14(2) --------HSFC1(1)           <---------ARR11(3)                         --------->ARR11(3) --------HSFB2a(2)          --------->ARR11(3)                --------->ZAT14   <---------ANAC58 ------->HSFB2a(2)   --------->LBD16                  --------->DAG2   --------->ARR14(3) -HSFB2a(1)         --------->DEAR3(1)               ---------->DOF2   <---------ARR14(3) >HSFB2a(1)        <---------LBD16               <-------TEIL<-----------HVH21  <---------ANAC58 >HSFC1(2)       <---------ALFIN1       --------->MYB52(1) --------->At4g35610 ------>NtERF2   ------ -HSFC1(2)  ------->TEIL  ----------->ARR10  ------->TEIL --------->RAP2.6(2)<------NtERF2     ------   tctagaaagcgatgaatctacaccggctaagttcttcagagagaacggacgttcaaaaagccgcttcagtcgagatctcggcgcttgtctcatccctaca  20205600                                                             <-----------GT1                                                   --------->ANAC58                                                   --------->ANAC46                                                   --------->ANAC58                                                  --------->SPL7        --------->ATHB12                        <---------SPL7       <---------YAB1         ---------->DOF2   --------->TOE1(2)   <---------TOE2(3)       --------->ANAC58     --------->TOE2(2) --->REM1(1)               --------->ANAC58   <---------------AtSPL3              --------->LBD16   < --->ANAC46         <----------DOF2           --------------->AtSPL3       ---------->DOF2--------->ALFIN1   ccattgatgttgataggctggactttggaacggaaaggcatggctcaaaacgtacgaaatgtttttctctacgtccaaaaatccctgagaaggtgtgcaa  20205700                                                                  <---------AHL20(2)                                                                <---------WOX13(1)                                                              --------->ATHB12                                                            <---------WOX13(1)                                                           <------------CBF   --------->ANAC58                                       --------->ATHB12     <---------HSFB2a(2)   --------->ANAC58                                      <---------YAB1        --------->HSFB2a(2) -- ----------ID1                                      --------->TOE2(3)          <---------HSFC1(1) ---   atgagacgaaacaaaactcaaaaaaaaaaaaaaaactagatgagaaaattcaaacgtttatgattgatttacttaaattttctagaggcataaatttaga  20205800                                                      --------->ANAC55(2)                                                     <---------LBD16                                                     <-------TEIL                <-----------HVH21                           ---------->DOF2          --------->ARR14(1)           <-----------TGA1                        <----------ID1              --------->CCA1(2)           --------->ANAC58                     --------->DAG2       <------MYB46(1) <---------WOX13(1)    --------->ANAC58                    --------->DAG2        <------MYB83<---------ANAC55(2)       --------->ANAC46           --------->AHL20(2)   <------ZmHOX2a(2)  --------->ARR14(2)     --------->ANAC58          --------->AHL20(2)   <---------ARR11(3)  --------->ARR11(1)     --------->ANAC46 ---------------------->ANAC81 --------->ARR11(3)  <---------ARR14(2) <------ZmHOX2a(1) <----------DOF2 ------->DOF2      ---------->DOF2        ----------->GT1<------------CBF --------->ANAC58   gaaagaaacacattaaaaaaaaaaaggggaaaagatcacttggatggtttttagatacggattgatactcgaggacacgaaaacgtcatgcttttaatgc  20205900                    <---------YAB1       <---------YAB1                                                                              --     <---------AHL20(2)   --------->ARR11(3)                        <---------GLK1(1)        <-------    <---------YAB1--------->YAB1                   <---------bZIP60(1)                 <------ZmHOX2a(1)  <---------ICU4 <---------YAB1   <---------GLK1(1)--------->bZIP60(1)           <-------TEIL--------   ttaatttttatttttgtttattataagagatgttggaaatcactatgtggatgatgtgattttggtttagatttctccaaaaatgcataggagattatct  20206000                                                                                             ------>MYB46(1)                                                                                             ------>MYB83                                                                                           --------->AtMYB61                                                                                         <---------ARR11(3)                                                        <---------ATHB12                 --------->ARR11(3) -------->DOF2                                      --------->MYB46(3)               ---------->DOF2 --ARR11(3)                                  <------ZmHOX2a(1)                  <------ZmHOX2a(1) ->ARR11(3)   ---------->DOF2    --------->MYB46(3)>>>>>>>>>>>>>>>>>LFY      <------ZmHOX2a(1)   tcaaagttttgtaagggaaagaagaagttttgctaacaacttagggaggaagaaaccaatgtttgatgcttcttatataggaggacagaaagacctatcc  20206100  Previous    Next  AGI:  At3g54550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38820.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO22614.1); contains InterPro domain Protein of unknown function DUF506, plant (InterPro:IPR006502) Range:  from: 20204605    to: 20205641    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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