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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
TEIL
<-------
TEIL
--------->
ARR14(1)
--------->
CCA1(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
MYB46(3)
--------->
ARR14(2)
<---------
MYB52(1)
<---------
GLK1(2)
<-------
GAMYB
--------->
ANAC58
------>
ZmHOX2a(2)
--------->
ANAC58
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
<-----------
GT1
--------->
ARR11(3)
<---------
ARR11(3)
----
----------->
RAV1(1)
------->
GAMYB
<---------
ANAC58
----------->
ARR10
agttcatcaacaacatttttcagtctggacttatcttcaacctctctctcaacgatctcggttgttttcgtctcgagatcacgctcagatacgttcgcac
20205200
--------->
YAB1
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
--------->
TOE2(3)
<---------
YAB1
--------->
YAB1
<---------
RVE1(1)
<---------
ATHB12
<---------
CCA1(1)
<---------
GLK1(2)
--------->
GLK1(2)
<---------
ARR11(3)
---------->
DOF2
---------->
DOF2
<---------
GLK1(2)
--------->
ARR11(3)
------>
DOF2
--------->
ANAC46
---------->
DOF2
<-----------
GT1
--------->
At4g35610
aaagtaaaagact
ctacaaaacattgaaaagaaaagaaactctgtttataacagattccaaacatcaaatgtgagcatcagagatattattcatcatac
c
20205300
--------->
GLK1(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
GLK1(2)
<---------
ARR14(2)
<---------
HSFB2a(1)
--------->
HSFC1(2)
<---------
HSFC1(2)
--------------->
AtSPL3
>>>>>>>>>
TBF1
<-----------
HVH21
<---------
HSFC1(1)
<-----------
TGA1
--------->
HSFB2a(2)
--------->
bZIP60(2)
--------->
HSFC1(1)
------>
ZmHOX2a(1)
--------->
ARR14(2)
<---------------
AGL15
<---------
SPL7
--------------->
AtSPL8
<---------
ARR14(2)
<---------
HSFB2a(2)
---------->
ID1
--------->
ZAT6
---------->
DOF2
<---------
MYB52(1)
<---------
ARR11(3)
--------->
HSFB2a(1)
--------->
YAB1
--------->
ANAC46
<---------
MYB46(3)
--------->
ARR11(3)
----------->
ARR10
--------->
ANAC46
<---------
ALFIN1
--------->
At4g35610
ttgaggcttcgaagaactcttctagaagaagaagattcttcgtcgtcctcgtcagagctatcagtaccacttccactgaagcagttgcatcggttacgaa
20205400
--------->
ZAT18
==================================
HOX2a_HOX2a
<---------
WOX13(1)
===============================
HOX2a_HOX2a
--
>>>>>>>>>
ARR2
------>
ZmHOX2a(2)
------>
ZmHOX2a(1)
<-
--------->
ATHB12
===================================
HOX2a_HOX2a
<-
<---------
YAB1
================================
HOX2a_HOX2a
--
--------------------->
WRI1
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<--------
<----------
DOF2
<------
ZmHOX2a(2)
------>
MYB46(1)
---------
------->
TEIL
--------->
ARR14(2)
------>
MYB83
---------
<---------
ZAT14
<---------
GLK1(2)
<---------
ZAT18
<---------
DEAR3(2)
<--------
--------->
ZAT14
<---------
ARR14(2)
--------->
AtMYB61
<---------
ZAT2
<---------
KAN4(2)
<---------
ZAT18
<---------
ARR11(3)
<---------
ALFIN1
--------->
ZAT2
<---------
LBD16
caatgcactttgattgtttctcactgtctggatcctcgatatagttctgcaccatcctcctcaaacagaccgagctcggttcgatttcttcggaattttc
20205500
---------->
ID1
<-------
GAMYB
<---------
DEAR3(1)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
---------->
DOF2
<---------
ARR11(3)
------->
HSFC1(1)
<---------
ARR14(2)
--------
HSFC1(1)
<---------
ARR11(3)
--------->
ARR11(3)
--------
HSFB2a(2)
--------->
ARR11(3)
--------->
ZAT14
<---------
ANAC58
------->
HSFB2a(2)
--------->
LBD16
--------->
DAG2
--------->
ARR14(3)
-
HSFB2a(1)
--------->
DEAR3(1)
---------->
DOF2
<---------
ARR14(3)
>
HSFB2a(1)
<---------
LBD16
<-------
TEIL
<-----------
HVH21
<---------
ANAC58
>
HSFC1(2)
<---------
ALFIN1
--------->
MYB52(1)
--------->
At4g35610
------>
NtERF2
------
-
HSFC1(2)
------->
TEIL
----------->
ARR10
------->
TEIL
--------->
RAP2.6(2)
<------
NtERF2
------
tctagaaagcgatgaatctacaccggctaagttcttcagagagaacggacgttcaaaaagccgcttcagtcgagatctcggcgcttgtctcatccctaca
20205600
<-----------
GT1
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
SPL7
--------->
ATHB12
<---------
SPL7
<---------
YAB1
---------->
DOF2
--------->
TOE1(2)
<---------
TOE2(3)
--------->
ANAC58
--------->
TOE2(2)
--->
REM1(1)
--------->
ANAC58
<---------------
AtSPL3
--------->
LBD16
<
--->
ANAC46
<----------
DOF2
--------------->
AtSPL3
---------->
DOF2
--------->
ALFIN1
ccattgatgttgataggctggactttggaacggaaaggcat
ggctcaaaacgtacgaaatgtttttctctacgtccaaaaatccctgagaaggtgtgcaa
20205700
<---------
AHL20(2)
<---------
WOX13(1)
--------->
ATHB12
<---------
WOX13(1)
<------------
CBF
--------->
ANAC58
--------->
ATHB12
<---------
HSFB2a(2)
--------->
ANAC58
<---------
YAB1
--------->
HSFB2a(2)
--
----------
ID1
--------->
TOE2(3)
<---------
HSFC1(1)
---
atgagacgaaacaaaactcaaaaaaaaaaaaaaaactagatgagaaaattcaaacgtttatgattgatttacttaaattttctagaggcataaatttaga
20205800
--------->
ANAC55(2)
<---------
LBD16
<-------
TEIL
<-----------
HVH21
---------->
DOF2
--------->
ARR14(1)
<-----------
TGA1
<----------
ID1
--------->
CCA1(2)
--------->
ANAC58
--------->
DAG2
<------
MYB46(1)
<---------
WOX13(1)
--------->
ANAC58
--------->
DAG2
<------
MYB83
<---------
ANAC55(2)
--------->
ANAC46
--------->
AHL20(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
--------->
ANAC58
--------->
AHL20(2)
<---------
ARR11(3)
--------->
ARR11(1)
--------->
ANAC46
---------------------->
ANAC81
--------->
ARR11(3)
<---------
ARR14(2)
<------
ZmHOX2a(1)
<----------
DOF2
------->
DOF2
---------->
DOF2
----------->
GT1
<------------
CBF
--------->
ANAC58
gaaagaaacacattaaaaaaaaaaaggggaaaagatcacttggatggtttttagatacggattgatactcgaggacacgaaaacgtcatgcttttaatgc
20205900
<---------
YAB1
<---------
YAB1
--
<---------
AHL20(2)
--------->
ARR11(3)
<---------
GLK1(1)
<-------
<---------
YAB1
--------->
YAB1
<---------
bZIP60(1)
<------
ZmHOX2a(1)
<---------
ICU4
<---------
YAB1
<---------
GLK1(1)
--------->
bZIP60(1)
<-------
TEIL
--------
ttaatttttatttttgtttattataagagatgttggaaatcactatgtggatgatgtgattttggtttagatttctccaaaaatgcataggagattatct
20206000
------>
MYB46(1)
------>
MYB83
--------->
AtMYB61
<---------
ARR11(3)
<---------
ATHB12
--------->
ARR11(3)
-------->
DOF2
--------->
MYB46(3)
---------->
DOF2
--
ARR11(3)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
->
ARR11(3)
---------->
DOF2
--------->
MYB46(3)
>>>>>>>>>>>>>>>>>
LFY
<------
ZmHOX2a(1)
tcaaagttttgtaagggaaagaagaagttttgctaacaacttagggaggaagaaaccaatgtttgatgcttcttatataggaggacagaaagacctatcc
20206100
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AGI:
At3g54550.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38820.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO22614.1); contains InterPro domain Protein of unknown function DUF506, plant (InterPro:IPR006502)
Range:
from: 20204605
to: 20205641
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.