Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------TOE2(3)                               <---------AHL20(1)                               --------->AHL20(1)                               --------->ARR11(3)                               <---------ARR11(3)                              --------->CCA1(2)                             --------->ARR11(3)  --------->GLK1(2)                             <---------ARR11(3) <---------GLK1(2)                   <---------ATHB12     <---------AHL20(1)               <---------AHL20(2)       --------->AHL20(1)               --------->AHL20(2)       --------->ARR11(3)  --------->At4g35610              --------->AHL20(2)    <---------AHL20(2)      <---------At4g35610  --------->YAB1     <   taacaattgaattcaatttaaatcatccaaagatatattttatatattgagattctttcttcatctcaaacttctaagttctaacatagtcatgtagttg  18433200            ------>NtERF2                             <----------ID1          --------->ATERF1(1)                       <---------------AtSPL8         <---------ATERF1(1)                       --------->DAG2         <------NtERF2                            ---------->DOF2   <---------ANAC58                           --------->MYB59   <---------ANAC58                      <---------TOE2(2)           --------->GLK1(2) ----------DOF2     --------->MYB46(3)   <---------TOE2(3)      ---------->DOF2 <-----------HVH21  --   aactttcgggccgaggcccataacaactccatctacttaaacgaaggttagataaagggacgaacaaaaagaatcagtctggtgtcagaaactagagtat  18433300                                      <---------At4g35610                          ---------->ID1                                  --------->ANAC58          -                        --------->MYB52(2)                            <-----------HVH21           ---                        <---------MYB46(3)             --------->ETT(2)   --------->ANAC58        <--                      <---------MYB52(1)    --------->ATHB12         <---------bZIP60(1)          --- <----------DOF2  <-----------GT1     --------->At4g35610         --------->ICU4            <-------- ----->TEIL    --------->YAB1 <----------DOF2        <-----------GT1 --------->bZIP60(1)   <---------ATHB12   gtacttttgtgtttgaattgtaacgtttgtttctttcttcagctcttcattggtttatcgacacagtacttatgtcactccaattgtgagaaaatcattc  18433400                                                                                               ------                                                                                               ------                                                               <---------AHL20(2)              <-----                                                              <---------AHL20(1)               <-----                                                              --------->AHL20(1)          <---------ANAC58                                                              --------->ARR11(3)          <---------ANAC46 -------->ZAT14       <---------GLK1(1)                       <---------AHL20(2)          <---------ANAC58 ------>ZAT18         --------->GLK1(1)  --------->MYB46(3)   --------->AHL20(2)    -------->ATHB1 -------ZAT14     --------->ANAC58    --------->REM1(1)       <---------ARR11(3)    --------->YAB1 ------>ZAT14     <---------TOE2(3)   --------->MYB46(3)     --------->AHL20(2)    <---------ATHB12 -ICU4            --------->ANAC58  ----------->RAV1(1) <---------MYB59            <---------YAB1   tgcacagtcgtttcgaaatcaaggaaatcaaacaagagcaacaacaatccaaagagtaccaaaatatatttggctatagagagctatcattgtcttgtac  18433500                                                                                   --------->ALFIN1                                                                                  <-------MYC3                                                                                  ------->MYC3                                                                                  <-------MYC4                                                                                  <-------MYC2                                                                                  ------->MYC2                                                                                  ------->MYC4                                                                                 --------->O2                                                                                 <---------O2                                                                                 --------->ANAC55(2)                                                                                 ====================bZIP_DOF                              <-----------RAV1(1)                                <---------ANAC55(2)                     <-------TEIL                                                --------->TGA1a      <-----------RAV1(1)--------->ARR14(2)                                      ====================bZIP_DOF --->ZAT14          <------ZmHOX2a(2)                                 <---------ANAC58 --->ZAT18         --------->ARR11(3)                                 <---------ANAC58 ----ZAT18         <---------ARR11(3)                       --------->ZAT6       <---------TGA1a ----ZAT14         --------->AGP1                   --------->TOE2(3) --------->ANAC55(2) <----------DOF2   acttgtccatgttgggctatagatccatatttgtgttgggctaggctcagtttttcttaataacacaaacttacttatcaaacacgtgttgtctttttgg  18433600                                   <-----------HVH21                   ---------->DOF2                                <---------At4g35610           ----------->RAV1(1)                                --------->At4g35610     --------->ANAC58                           >>                      <----------ID1<---------MYB52(1)  --------->ANAC58                    ---------                   ---------->DOF2*TSS                  --------->ANAC46                  <---------YAB1  <---------AHL20(2)<---------------AtSPL8 ---------->DOF2   --------->MYB46(3)       <---------DAG2   ttatttaagtagttgacaaacaaaagtacaaataagctgttagggcaaaggagcaaaaacgaaaccacagagagaaagcctccgtctcccttatcaaaga  18433700                                                                                               <-----      <---------ANAC58                                                                       ------>MYB83      <---------ANAC58                                                                       ------>MYB46(1)      --------->O2                                                         ----------->GT1 <---------MYB59      <---------O2                                                         <---------ZAT6  <---------MYB46(2)      <---------ANAC46                                                  --------->LBD16    <---------MYB111(1)      <---------ANAC55(2)                     --------->AHL20(2)       --------->LBD16  <-----------GT1      <---------ANAC55(1)                ----------->GT1             <---------LBD16 <---------ICU4 >>>>>>>TBF1        --------->ZAT6      --------->CCA1(2) <---------At4g35610     --------->YAB1 ->DOF2      <-----------GT1         <---------YAB1       --------->At4g35610  --------->WOX13(1)  --   agaagaagacgtgtataacaaaacactagacacattgtgaagatagaaaaaaatggagagagcagcaattctcccgagtgttaatcaaaattacctactt  18433800                                                         <------NtERF2                                                         <---------MYB52(1)                                                        ------>NtERF2                                                        <-----------HVH21                                                        <---------RAP2.6(3)                                                       --------->DEAR3(1)                                                       --------->RAP2.6(2)                                                       --------->RRTF1(3)                                                       --------->RRTF1(2)                                                       --------->DREB2C(2)                             <---------ALFIN1          --------->RAP2.3(3)                             --------->ANAC46         <------NtERF2                     --------->ANAC46                 --------->ERF1                     --------->ANAC58                 --------->ATERF1(1)                     --------->ANAC58                 --------->RAP2.3(1)                    <-------PIF5                      --------->RRTF1(1)                    <-------MYC3                     <---------ATERF1(1)                    ------->MYC3                     --------->ABI4(1)                    ------->MYC2                     ------>NtERF2                    <-------MYC2                    --------->ANAC46                    ------->PIF5                    --------->DEAR3(1)                   --------->ANAC46                 --------->RRTF1(3)                 <---------ALFIN1                   <---------DEAR3(1)         ------>NtERF2     <---------ALFIN1         --------->RAP2.3(2)        --------->ANAC58 ------>NtERF2              --------->RAP2.3(3)        --------->ANAC46--------->DEAR3(1)         --------->ATERF1(1)        --------->ANAC58--------->RAP2.3(3)        --------->DEAR4(2)      --------->ANAC58 --------->RAP2.3(1)         --------->ERF1      --------->ANAC46------>NtERF2                --------->ORA47(2)                      <---------At4g35610      --------->ANAC58<---------ATERF1(1)          --------->RAP2.3(1)                     --------->At4g35610  <-----------HVH21--------->ANAC58      <---------CCA1(2)                   <---------WRKY38(1)  ------>ZmHOX2a(1)--------->ANAC58    --------->ANAC46--------->RAP2.3(2)   <---------WRKY12 -----DOF2<------NtERF2<------NtERF2   --------->ANAC55(1)        ------>NtERF2    <----------DOF2 -------->ID1   <---------REM1(2)------>ZmHOX2a(1)<---------RAP2.3(1)      <-----------HVH21   tgtccttcacgcgccttctccacgcgcctccactcctctactcgtaacttatcgccgccgtcatttgcctccatcaaggtcaactcttttctcatctccc  18433900                                                 --------->At4g35610                                                 --------->ZAT2                                           <-----------HVH21                                          <----------DOF2                                    <---------GLK1(2)                     ----------->HVH21  <---------YAB1 <---------At4g35610                   <---------At4g35610 <---------ARR11(3)                   <---------------AGL15            <---------YAB1  <---------CCA1(2)    <---------At4g35610------>ZmHOX2a(1)   <---------GLK1(2)     --------->YAB1--------->At4g35610 --------->ARR11(3)     <<<<<<<<<TBF1 --------------->AGL15   tctcttatcatcttctgatttatctgacccatttctccgattatctttcacagcttcagcattcttcttcctctgtttcttctaatggtggaatctctct  18434000                                         <----------DOF2                                        --------->MYB52(2)                                      <---------MYB52(1)                     <-------TEIL                               <---------TOE1(2)      <------MYB46(1)       <---------ARR11(3)                               --------->LBD16       --------->MYB55(2)    <---------GLK1(2)                 <---------ANAC46   --------->MYB52(2)<------MYB83       <---------TOE1(2)                 <---------ANAC58  <-------TEIL      <---------MYB46(3)  <---------TOE2(2)                 <---------ANAC58<---------GLK1(2)  <---------ANAC46    <-----------RAV1(2)    --------->AtLEC2          <-----------RAV1(2)<---------AtMYB61  <---------ARR11(3)  <---------AHL20(2)   tactcgatgcaacgctgtttcgtccaattcttccaggttcgttctttgtttttggtgggtatttgtccaagttctcaggttcttacttatatatatgtat  18434100  Previous    Next  AGI:  At3g49680.1    Description:  ATBCAT-3/BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3); branched-chain-amino-acid transaminase/ catalytic. Identical to Branched-chain-amino-acid aminotransferase 3, chloroplast precursor (BCAT3) [Arabidopsis Thaliana] (GB:Q9M401;GB:Q8LAT6;GB:Q9M2Z0); similar to ATBCAT-5, branched-chain-amino-acid transaminase/ catalytic [Arabidopsis thaliana] (TAIR:AT5G65780.1); similar to branched-chain amino acid aminotransferase [Solanum tuberosum] (GB:AAF07192.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544); contains InterPro domain Branched-chain amino acid aminotransferase II; (InterPro:IPR005786) Range:  from: 18433634    to: 18436678    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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