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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
TOE2(3)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
CCA1(2)
--------->
ARR11(3)
--------->
GLK1(2)
<---------
ARR11(3)
<---------
GLK1(2)
<---------
ATHB12
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
ARR11(3)
--------->
At4g35610
--------->
AHL20(2)
<---------
AHL20(2)
<---------
At4g35610
--------->
YAB1
<
taacaattgaattcaatttaaatcatccaaagatatattttatatattgagattctttcttcatctcaaacttctaagttctaacatagtcatgtagttg
18433200
------>
NtERF2
<----------
ID1
--------->
ATERF1(1)
<---------------
AtSPL8
<---------
ATERF1(1)
--------->
DAG2
<------
NtERF2
---------->
DOF2
<---------
ANAC58
--------->
MYB59
<---------
ANAC58
<---------
TOE2(2)
--------->
GLK1(2)
----------
DOF2
--------->
MYB46(3)
<---------
TOE2(3)
---------->
DOF2
<-----------
HVH21
--
aactttcgggccgaggcccataacaactccatctacttaaacgaaggttagataaagggacgaacaaaaagaatcagtctggtgtcagaaactagagtat
18433300
--------->
At4g35610
---------->
ID1
--------->
ANAC58
-
--------->
MYB52(2)
<-----------
HVH21
---
<---------
MYB46(3)
--------->
ETT(2)
--------->
ANAC58
---
<---------
MYB52(1)
--------->
ATHB12
<---------
bZIP60(1)
<--
<----------
DOF2
<-----------
GT1
<---------
At4g35610
--------->
ICU4
<--------
----->
TEIL
--------->
YAB1
<----------
DOF2
<-----------
GT1
--------->
bZIP60(1)
<---------
ATHB12
gtacttttgtgtttgaattgtaacgtttgtttctttcttcagctcttcattggtttatcgacacagtacttatgtcactccaattgtgagaaaatcattc
18433400
<-----
------
<---------
AHL20(2)
<-----
--------->
AHL20(1)
------
<---------
ARR11(3)
<---------
ANAC58
<---------
AHL20(1)
<---------
ANAC58
-------->
ZAT14
--------->
GLK1(1)
--------->
ARR11(3)
<---------
ANAC46
------>
ZAT14
<---------
GLK1(1)
--------->
MYB46(3)
<---------
AHL20(2)
--------->
YAB1
------>
ZAT18
--------->
ANAC58
--------->
MYB46(3)
--------->
AHL20(2)
-------->
ATHB1
-------
ZAT14
<---------
TOE2(3)
--------->
REM1(1)
--------->
AHL20(2)
<---------
YAB1
-
ICU4
--------->
ANAC58
----------->
RAV1(1)
<---------
MYB59
<---------
ATHB12
tgcacagtcgtttcgaaatcaaggaaatcaaacaagagcaacaacaatccaaagagtaccaaaatatatttggctatagagagctatcattgtcttgtac
18433500
--------->
ALFIN1
------->
MYC3
<-------
MYC3
<-------
MYC2
------->
MYC4
<-------
MYC4
------->
MYC2
====================
bZIP_DOF
--------->
ANAC55(2)
<---------
O2
====================
bZIP_DOF
<-----------
RAV1(1)
--------->
O2
<-------
TEIL
<---------
ANAC55(2)
<-----------
RAV1(1)
--------->
ARR14(2)
<---------
TGA1a
----
ZAT14
<------
ZmHOX2a(2)
<---------
ANAC58
--->
ZAT14
<---------
ARR11(3)
--------->
ANAC55(2)
----
ZAT18
--------->
ARR11(3)
--------->
ZAT6
--------->
TGA1a
--->
ZAT18
--------->
AGP1
--------->
TOE2(3)
<---------
ANAC58
<----------
DOF2
acttgtccatgttgggctatagatccatatttgtgttgggctaggctcagtttttcttaataacacaaacttacttatcaaacacgtgttgtctttttgg
18433600
<-----------
HVH21
---------->
DOF2
<---------
At4g35610
----------->
RAV1(1)
--------->
At4g35610
--------->
ANAC58
>>
<----------
ID1
<---------
MYB52(1)
--------->
ANAC46
---------
---------->
DOF2
*
TSS
--------->
ANAC58
<---------
YAB1
<---------
AHL20(2)
<---------------
AtSPL8
---------->
DOF2
--------->
MYB46(3)
<---------
DAG2
ttatttaagtagttgacaaacaaaagtacaaat
aagctgttagggcaaaggagcaaaaacgaaaccacagagagaaagcctccgtctcccttatcaaaga
18433700
<-----
<---------
O2
------>
MYB83
<---------
ANAC58
------>
MYB46(1)
<---------
ANAC58
<---------
ZAT6
<---------
MYB59
<---------
ANAC46
----------->
GT1
<---------
MYB46(2)
<---------
ANAC55(1)
--------->
LBD16
<---------
MYB111(1)
--------->
O2
--------->
AHL20(2)
--------->
LBD16
<-----------
GT1
<---------
ANAC55(2)
----------->
GT1
<---------
LBD16
<---------
ICU4
>>>>>>>
TBF1
--------->
ZAT6
--------->
CCA1(2)
<---------
At4g35610
--------->
YAB1
->
DOF2
<-----------
GT1
<---------
YAB1
--------->
At4g35610
--------->
WOX13(1)
--
agaagaagacgtgtataacaaaacactagacacattgtgaagatagaaaaaa
atggagagagcagcaattctcccgagtgttaatcaaaattacctactt
18433800
<---------
MYB52(1)
<------
NtERF2
<---------
RAP2.6(3)
------>
NtERF2
<-----------
HVH21
--------->
RAP2.3(2)
--------->
RAP2.6(2)
--------->
DEAR3(1)
--------->
RAP2.3(3)
--------->
RRTF1(3)
<---------
ALFIN1
--------->
RRTF1(2)
--------->
ANAC46
--------->
ATERF1(1)
--------->
ANAC58
<------
NtERF2
--------->
ANAC46
--------->
ERF1
--------->
ANAC58
--------->
RRTF1(1)
------->
PIF5
--------->
RAP2.3(1)
<-------
MYC3
------>
NtERF2
------->
MYC3
<---------
ATERF1(1)
------->
MYC2
--------->
ABI4(1)
<-------
MYC2
--------->
ANAC46
<-------
PIF5
--------->
RAP2.3(2)
--------->
ANAC58
--------->
RAP2.3(3)
<---------
ALFIN1
<---------
DEAR3(1)
------>
NtERF2
<---------
ALFIN1
--------->
DEAR3(1)
--------->
ANAC58
------>
NtERF2
--------->
RRTF1(3)
--------->
ANAC46
--------->
DEAR3(1)
--------->
DEAR4(2)
--------->
ANAC58
--------->
RAP2.3(3)
--------->
ERF1
--------->
ANAC46
--------->
RAP2.3(1)
--------->
ATERF1(1)
--------->
ANAC58
------>
NtERF2
--------->
ORA47(2)
--------->
At4g35610
--------->
ANAC58
<---------
ATERF1(1)
--------->
RAP2.3(1)
<---------
At4g35610
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
CCA1(2)
<---------
WRKY12
<-----------
HVH21
--------->
ANAC58
--------->
ANAC46
--------->
DREB2C(2)
<---------
WRKY38(1)
-----
DOF2
<------
NtERF2
<------
NtERF2
--------->
ANAC55(1)
------>
NtERF2
<----------
DOF2
-------->
ID1
<---------
REM1(2)
------>
ZmHOX2a(1)
<---------
RAP2.3(1)
<-----------
HVH21
tgtccttcacgcgccttctccacgcgcctccactcctctactcgtaacttatcgccgccgtcatttgcctccatcaag
gtcaactcttttctcatctccc
18433900
--------->
At4g35610
--------->
ZAT2
<-----------
HVH21
<----------
DOF2
<---------
GLK1(2)
----------->
HVH21
<---------
YAB1
<---------
At4g35610
--------->
At4g35610
<---------
ARR11(3)
<---------------
AGL15
<---------
YAB1
<---------
CCA1(2)
<---------
At4g35610
------>
ZmHOX2a(1)
<---------
GLK1(2)
--------->
YAB1
<---------
At4g35610
--------->
ARR11(3)
<<<<<<<<<
TBF1
--------------->
AGL15
tctcttatcatcttctgatttatctgacccatttctccgattatctttcacag
cttcagcattcttcttcctctgtttcttctaatggtggaatctctct
18434000
<----------
DOF2
--------->
MYB52(2)
<---------
MYB52(1)
<-------
TEIL
<---------
TOE1(2)
<------
MYB46(1)
<---------
ARR11(3)
--------->
LBD16
--------->
MYB55(2)
<---------
GLK1(2)
<---------
ANAC58
--------->
MYB52(2)
<------
MYB83
<---------
TOE1(2)
<---------
ANAC58
<-------
TEIL
<---------
MYB46(3)
<---------
TOE2(2)
<---------
ANAC46
<---------
GLK1(2)
<---------
ANAC46
<-----------
RAV1(2)
--------->
AtLEC2
<-----------
RAV1(2)
<---------
AtMYB61
<---------
ARR11(3)
<---------
AHL20(2)
tactcgatgcaacgctgtttcgtccaattcttccag
gttcgttctttgtttttggtgggtatttgtccaagttctcaggttcttacttatatatatgtat
18434100
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AGI:
At3g49680.1
Description:
ATBCAT-3/BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3); branched-chain-amino-acid transaminase/ catalytic. Identical to Branched-chain-amino-acid aminotransferase 3, chloroplast precursor (BCAT3) [Arabidopsis Thaliana] (GB:Q9M401;GB:Q8LAT6;GB:Q9M2Z0); similar to ATBCAT-5, branched-chain-amino-acid transaminase/ catalytic [Arabidopsis thaliana] (TAIR:AT5G65780.1); similar to branched-chain amino acid aminotransferase [Solanum tuberosum] (GB:AAF07192.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544); contains InterPro domain Branched-chain amino acid aminotransferase II; (InterPro:IPR005786)
Range:
from: 18433634
to: 18436678
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.