Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                      <-------TEIL --                                    <-----------GT1                           --------->AHL20(1)   <-                            ------>ZmHOX2a(1)                                 --------->AHL20(2)  <--         --------->YAB1 <-----------GT1                                       <---------AHL20(2) <---  <---------TOE2(3)    <-----------GT1                                       <---------AHL20(2)  ---- --------->DOF2       <---------AHL20(2)<----------DOF2                      --------->AHL20(2)  <--- ----->TOE2(3)    <------------------------ANAC81                       --------->AHL20(2) --------->YAB1   cttaaaggtattaataacttccattttatcctcttgaatttccttttttatctgttatacatatgcaagtttaagtaaattaaattggttcattaacaat  10824800                                                  <---------bZIP60(2)                                                  <---------ANAC58                                                  <---------ANAC58                                                  <---------ANAC46                                             --------->CCA1(2) -TOE2(3)                                   --------->ARR11(3) ------->ARR11(3)                           --------->ARR14(2) --------ARR11(3)                           <---------ARR11(3) -------CCA1(2)                             <---------ARR14(2) ------AHL20(1)                             --------->ARR11(1) ----->AHL20(1)         <---------DAG2    ----------->ARR10                 <---------RAP2.6(3) ------ARR11(3)      <-----------GT1 ---------->DOF2             <---------ALFIN1   atatcttcacgttgaagaaacatttacctttccaatcgcaaaagaagatatgacttggaagaggcctccagccttggccttcatgtctcggtcgtaatct  10824900                                                                                     --------->KAN4(2)                                                                                    --------->HSFB2a(1)                                                                                    <---------HSFB2a(1)                                                                             <---------ANAC58                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)              --------->ATHB12                                       <---------AHL20(2)             <---------AHL20(2)                                      --------->AHL20(2)           <--             <---------YAB1                                          <---------AHL20(1)      --------          <----------DOF2                            ---------->DOF2 --------->AHL20(1)  <----------DOF2     <----------DOF2                   --------->ZAT18   ---------->DOF2     <---------ANAC58<-------   acttggtcttttctttttattgggcagacatacttggcgaatgccctaagtttctcaaagaaagccttgaatttatttgtcttgggacattctttctcga  10825000                                   ----------->GT1                                  <---------TOE1(3)                          <---------At5g28300                         --------->MYB52(1)       ---------->DOF2   <---------DOF5.7(2)   ------>ZmHOX2a(1) ----------->HVH21     --------->DOF5.7(2)    --------->TOE2(3)      ----------->RAV1(2) ---------HVH21       <----------DOF2 <-------TEIL      <---------MYB46(3)           <---------ANAC58 ->HSFB2a(2)          --------->TOE2(3)    <---------ARR11(3)    <-------TEIL        <---------ANAC58 --HSFB2a(2)    --------->ZAT6    <---------TOE2(3)     --------->MYB52(2)   ---------->DOF2   ggtcggacacaaagactatcactactttaacggtgtaaggttcaacatccttcaacgtttgtggaggttcaatctgaggcaaagttggcttaagcttcaa  10825100               <---------HSFB2a(2)               --------->YAB1                    --------->ARR11(3) <---------At4g35610                         ---------->DOF2          >>>>>>>>>>>>>>>>>LFY        --- --------->ZAT2--------->HSFB2a(2)        ----------->GT1  --------->At4g35610     <---------ARR11(3) --------->At4g35610               ---------->DOF2   --------->AHL20(2)           <---------CCA1(2)   atgagctgaaacgatgtccagaagagtcactgatgcaaaaagaatggtaaagcataaaaatagctgaactcttgccattgttatatatcttgttagaaat  10825200                                                                                                -----                                                                                             <-------                                                                                        ----------->HVH21                                                                 --------------->AGL15--------->At4g35610                                             --------->YAB1  <---------ZAT18          ----------->RAV1(2)                                            <---------YAB1   --------->ZAT18        ------>ZmHOX2a(2)                                           <-----------TBP  <---------ZAT6<------ZmHOX2a(1) ---------                               <---------AHL20(2)    <---------YAB1     <---------TOE2(3)  <---------YAB1 ------->DOF2    <------------CBF         <----------DOF2 <---------ANAC46=================HOX2a_HOX2a   aaaagttgaagaatgaaggaattgaaatgggatttttttgtatacttttatagttatgtttagtgttctatgtttaggattactgatcccctgaccattg  10825300                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                  <---------ANAC58                                  --------->ARR11(3)                              ---------->DOF2    <---------TOE1(2)                        --------->YAB1<-------TEIL<---------ANAC58                        <---------TOE2(3) <------------CBF      <---------AHL20(2)        <---------TOE2(2)                  <---------ANAC58 ------>GT1          --------->YAB1  <----------DOF2                                <---------ANAC46 -----CBF          --------->ICU4 <---------ARR11(3)   <-----------GT1         <----------DOF2 >ATHB12    ---------->DOF2--------->YAB1       <-----------GT1 <------------CBF    <---------ANAC58   gtaaattggtggattaaagtcataaataatagtaaagagcttcatggttcttacgtttcacaaatctattgatggtgaagtcttttgcgtttgatgtttt  10825400                                                                          <---------MYB46(3)                                                                          <---------DEAR3(2)                                                                          --------->MYB52(2)                                                                          <------MYB83                                                                          <------MYB46(1)                                                                         <---------AtMYB61                                                                         --------->MYB111(1)                          <-----------TBP                               <--------P                        <-----------TBP                                <---------MYB52(1)                      <----------DOF2                                <---------YAB1                      <---------DAG2                              --------->ARR14(2)                <------------CBF                                  <---------ARR14(2)             <---------AHL20(2)    ----------->GT1              <------MYB46(1)       <----------DOF2            --------->YAB1--------->AHL20(2)                    <------MYB83      <---------CCA1(2)   ttgtattagttttataaaaattgactttttatatagaaggtttatagaatgaatacatatgaaggctggttctggttggttcccctatctttgacttcta  10825500                                    <------NtERF2                                  --------->DREB2C(2)                                  --------->DEAR3(1)                                  --------->RAP2.3(2)                                  --------->RAP2.3(3)                                  --------->RRTF1(2)                                  --------->RRTF1(3)                                  --------->RAP2.6(2)                                  --------->ATERF1(2)                                  --------->ANAC46                                  <---------ATERF1(2)                                 --------->ATERF1(1)                                 --------->ERF1                                 --------->RAP2.3(1)                                <---------RAP2.3(1)                                <---------ATERF1(1)                   --------->ALFIN1------>NtERF2                              --------->ANAC58                 <---------ANAC46--------->ORA47(2)                           --------->ANAC58        --------->YAB1    <---------YAB1                           --------->At5g28300    <---------AHL20(2)----------->GT1     <-------TEIL            ----------->GT1         <---------ALFIN1   cttgattttatcacaaactgtgtgtggtatcattcgccgccatattcattctctatattcgactaatacggtgatttgataagcaagtcggaacacactc  10825600                               >>>>>>>>>>GATA-2               <---------ARR11(3)                               >>>>>>>>>>GATA-3               --------->ARR11(3)                               >>>>>>>>>>GATA-1      <---------ANAC58                               >>>>>>>>>>GATA-4      <---------ANAC58                              --------->YAB1        <-------TEIL                 <-------GAMYB                      ----------->GT1            <---------MYB46(3)              --------->TOE2(3)                   --------->ARR14(2)           --------->ALFIN1                 --------->TOE1(3)                   <---------ARR14(2)    <-----------------AGL3                 ----------->GT1                <---------ANAC46         ----------------->AGL3                 ------>ZmHOX2a(2)             --------->ALFIN1<---------YAB1     <---------------AtSPL8      <---------YAB1     --------->AHL20(2)<------ZmHOX2a(1) ----------------->AGL2          <----------DOF2            <     ---------->DOF2 ----------->GT1   xxxxxxxxxxxxxxxx>smallRNA(i)<-----------GT1        <---------MYB52(1)   tcttcaataaaacagatgggggataggaaatatgataagggactccaaatgtggttcgtatcaagaacttaacctcttttgatcgttaaactgttagcca  10825700  Previous    Next  AGI:  At3g28810.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28820.1); contains InterPro domain Protein of unknown function DUF1216 (InterPro:IPR009605) Range:  from: 10823708    to: 10825178    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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