Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <-----------RAV1(1)                                                              --------->MYB52(1)                                                           --------->ANAC55(2)                                                           --------->ANAC55(1)                                                           --------->bZIP60(2)                  -----                                                           <---------ANAC55(2)                  -----                                                           --------->ANAC58                    <-----  <-----------GT1                                          --------->ANAC58                   <------  --------->ARR11(3)                                       --------->O2                    <---------GLK1(1) ------->YAB1                                              --------->ANAC46       <-----------GT1   agaataacttgacttcatacatactatttgaattcggatagtatcacaaaacatcactaccacgtaactgttggaacttcaattttacaaagtatttccg  8194300                                                   <-----------------AGL3                                                  --------->YAB1                                                 <---------YAB1                                  <---                                                <---------ARR11(3)                               ----                                                --------->ARR11(3)                               <---   <----------DOF2                             --------->YAB1                                   <----   <---------DAG2                             --------->ICU4                                    <---- ->NtERF2                                    <---------KAN4(2)                                  <---- ---->LBD16            --------->ZAT14      --------->YAB1                                      ----- ----RAP2.6(2)         <---------ZAT14   --------->YAB1        <---------HSFB2a(1)            ------- ---LBD16<---------------------WRI1   --------->YAB1         <---------GLK1(2)              <--------   gctaacttttcggcgagtttttcagtgaagtttgtcacaaaaataagaatgatcatatttttggaatctttgtaatcgttttcaaagttttctctccgga  8194400               <--------HAHB4      <---------ARR14(2) --------->ANAC55(2)      --------->ARR14(2) <---------ANAC55(2)                                      <-----------HVH21  <---------LBD16 <-----------GT1                      --------->TOE1(1)         --------->ANAC46 -------TaMYB80--------->ATHB51                       ------>ZmHOX2a(1)       <---------LBD16 ----->GLK1(1) <---------ICU4                       ------>ZmHOX2a(2)        <-----------GT1 ------GLK1(1) --------->YAB1              ----------->HVH21     <---------AHL20(2) -------ARR10  <--------ATHB1            <---------ANAC55(2) <---------AHL20(2)  --------->LBD16 -----GLK1(2) <---------ATHB12           --------->ANAC55(2) --------->AHL20(2) --------->LBD16 -----ARR14(2)--------->ICU4       <---------YAB1 --------->ARR14(2)     <---------ICU4 ---->ARR14(2)<---------ATHB51  <---------YAB1    <---------ARR14(2)  --------->YAB1       --------->YAB1 -->LBD16     --------->AHL20(2)--------->ICU4----------->RAV1(2)--------->AHL20(2)      --------->AtLEC2 -LBD16     --------->YAB1    --------->YAB1  <---------At4g35610--------->YAB1<---------LBD16   <---   ttttcgcggttctacaataattacattacatatcatgatcaatatgtgacctgatcctcgtagttaattaaaacataatttcccggtcaccattcaaaac  8194500                                                                                            <--------                                                                                          ------->MYC3                                                                                          ------->MYC4                                                                                          <-------MYC4                                                                                          <-------MYC2                                                                                          <-------MYC3                                                                                          ------->MYC2                                                                                          ------->PIF5                                                                                          <-------PIF5                                                                                         ============                                                                                         --------->TGA1a                                                                                         <---------TGA1a                                                                                         ============                                                                                         --------->O2                                                                       --------->MYB52(1)>>>>>>>>>>HY5                                                                 <---------WOX13(1)      <---------O2                                   --------->TOE2(3)           -------->HAHB4            --------->ANAC55(2)                                  --------->At4g35610          --------->ATHB12        <---------ALFIN1 <---------HSFC1(1)           --------->TOE2(3)               --------->ICU4       --------->ANAC58 <---------HSFB2a(2)        --------->ARR11(3)                <---------YAB1       --------->ANAC58 --------->HSFB2a(2)        <---------ARR11(3)                <---------ATHB12  <---------ATHB12    - -------DOF2  <-----------GT1<---------YAB1      --------->MYB52(1)  <---------MYB52(2)>>>>>>>>>>>>>>   tttctagatggaagattaacaaaacaaaattatcttagcttaattttgtagtaacagagaagaaatgattaactaacatctaatcaagcccacgtgtcat  8194600                                       ------------>CBF                                      --------->ANAC58                 ------>MYB46(1)                                      --------->ANAC46                 ------>MYB83                                      --------->ANAC58               <---------ALFIN1                                     ------->PIF4                 <---------ALFIN1                                     <-------PIF4                 --------->AtMYB61                                     ------->PIF5              <---------ALFIN1      --------->AtMYB61              <-------PIF5              --------->ANAC46           --------->ATHB51     ------------>CBF                ------->MYC2           --------->ANAC46              --------->ATHB12     --------->MYB46(3)              <-------MYC3           --------->ANAC58             <---------YAB1    ------>NtERF2                    ------->MYC3           --------->ANAC58          --------->AHL20(2) ---HVH21<---------ATHB12---------->DOF2        --------->ANAC58 --------->MYB46(3)   <---------AHL20(2) ===========================bZIP_DOF <-------MYC2         <---------ALFIN1------>ZmHOX2a(1) ===========================bZIP_DOF <-------MYC4        <-------TEIL--------->AtMYB61*TSS<---------ICU4 -------->ANAC46 ---------->DOF2   ------->TEIL --------->ANAC46 <---------MYB55(2)   <---------YAB1 >>>>>>HY5  ----------->GT1     --------->AtLEC2--------->ANAC58------>NtERF2    ------>ZmHOX2a(1)   aaaccccaccaatgaagaaaaaagagcaaaagacatgcacatgcaattacacgaatacatacaccccaccaccatcctccctccttatattattattgcc  8194700                                                                         --------->ATHB12                                                                        <---------YAB1                                                                  <---------MYB52(2)                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                 --------->ANAC55(1)        ---------             <<<<<<<<<TBF1                                       --------->ANAC58           ---------        <----------DOF2     <----------DOF2                  --------->YAB1 ------>ZmHOX2a(2)    ----   ------>ZmHOX2a(1)       <---------DAG2                 <---------------AGL15           ------->TEIL   ccttcctctcctttcttcttcccctcttaccttttcagagagagaaacaatatttctaatctattacaagtaacatgatcggccaacttatgaacctcaa  8194800                                  ---------->DOF2                                 ----------->HVH21                                <------NtERF2                                <----------CDC5                               ------>NtERF2                               <---------At4g35610                               --------->At4g35610                              <---------ANAC46                             --------->ATERF1(1)                             <------NtERF2                             --------->RAP2.3(1)                            <---------RAP2.6(1)                            ------>NtERF2                            <---------ATERF1(1)                            <---------RRTF1(1)                            <---------RAP2.3(1)                            <---------DEAR4(2)                            <---------ORA47(2)                           <---------RRTF1(3)                           <---------RAP2.3(3)                           <---------RRTF1(2)                           <---------RAP2.3(2)                        --------->ANAC58                           <---------DEAR3(1)                     <---------MYB46(3)                           --------->ATERF1(2)                   --------->ALFIN1      <---------GLK1(1)    --------->DEAR3(1)                    <---------ANAC46      --------->GLK1(1)    <---------ATERF1(2)                  <------NtERF2      --------->ZAT2      <---------ABI4(1)                     <-------GAMYB      --------->At4g35610 --------->ATERF1(1)                  <---------MYB46(3)      <---------At4g35610 <------NtERF2                        --------->MYB55(2)      <---------ZAT2     <---------ATERF1(1)                   <---------DEAR4(2)                   -  --------->ANAC58       ------>NtERF2                         <---------DEAR3(2)               -----  --------->ANAC58       --------->LBD16                      <---------DREB2C(2)              <-----  --------->ANAC46      --------->ANAC46                      <---------DEAR3(1)          --------->ARR14(2) <---------LBD16        <---------DEAR3(1)               <---------ARR14(2)               <---------ARR14(2) >TOE1(3)              <---------LBD16  --------->At4g35610  <---------ABI4(1)  --------->HSFC1(2)--- >TOE2(3)  <-----------HVH21<---------ERF1               --------->ARR14(2)     <---------HSFC1(2)<-- ----->ANAC46    ------>NtERF2<---------DEAR3(1)   ------>ZmHOX2a(1)  --------->ANAC58 --------->ANAC46   ggccacggagctctgtctcggcctccccggcggcgctgaagcagttgagagtcctgccaaatcggcggtgggaagcaagagaggcttctccgaaaccgtt  8194900                                                                                                 ----                                                                                            ------>ZmHOX2a(1)                                                                                          --------->HSFC1(2)                                                                                          <---------HSFC1(2)                                                                                          ------>ZmHOX2a(2)                                          ------>ZmHOX2a(2)                               ===========                                        --------->ARR11(3)                               ============                                      --------->WRKY12                                   <------ZmHOX2a(2)                                     <---------MYB52(1)                                 <---------ARR11(3)                                    <-------GAMYB                                       <---------GLK1(2)                                   <---------ANAC46      --------->At4g35610            --------->ARR11(3) ----->ZmHOX2a(2)                 <------NtERF2          <---------At4g35610            --------->ARR14(2) ---->WRKY12--------->YAB1    --------->HSFC1(2)        <-----------RAV1(1)             <---------ARR14(2) ----MYB52(1)                 --------->HSFB2a(1)    --------->ARR14(2)             ---------->DOF2 ------>ARR11(3)              <---------HSFB2a(1)    <---------ARR14(2)          --------->TOE1(3) -------ARR11(3)        ---------->DOF2 <---------ARR11(3)                       --------->TOE2(3)   gatctcatgctcaatcttcaatctaacaaagaaggctccgttgatctcaaaaacgtttctgctgttcccaaggagaagactacccttaaagatccttcta  8195000                                               xxxxxxxxxxxxxxxx>smallRNA(i)                                              <---------RVE1(1)                                             <---------ARR11(3)                                             --------->ARR11(3)                  <---------ALFIN1      --------->TOE2(3)              <---------At4g35610  --------->AHL20(1)              --------->At4g35610  <---------ARR11(3)             --------->ANAC58      --------->ARR11(3)    ------>ZmHOX2a(1)             <---------AHL20(2)                  --------->ARR11(3)  ----------->RAV1(2)           --------->AHL20(2)                    <---------ARR11(3) ----->ANAC46--------->ANAC58   <---------AHL20(2)          ----------->GT1                  -------- ==========HOX2a_HOX2a        --------->AHL20(2)<---------AHL20(2) --------->DAG2 <-----------GT1 ==========HOX2a_HOX2a  --------->AHL20(2)   <---------GLK1(2)    ---------->DOF2<-----------GT1  <--   agcctcctgctaagtaagctacacatttacatatatatatattcttagattttttttttttttggttaaaaagttcttagttttttccagtccatatata  8195100                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                    --------->AHL20(2)                                                   <---------ARR11(3)                                           <---------ARR14(2)                                           --------->KAN4(2)                                           --------->ARR14(2)       <---------ANAC55(2)                --------->KAN4(1)       --------->ANAC55(2)                <---------KAN4(1)       <---------ANAC58                   --------->HSFB2a(1)       <---------ANAC58                   <----------TaMYB80       <---------ANAC55(1)                <---------HSFB2a(1)      <-------TEIL                       <---------KAN4(2)     <-----------GT1                     ---------->TaMYB80 ->AHL20(2)      --------->ANAC46<---------ARR11(3)<---------AHL20(1) -----TEIL     <-----------GT1   --------->ARR11(3)--------->ARR11(3)         ------>ZmHOX2a(1)   tacatatatacgtgtttatacacatctatgtctaagttcttagaatattcgaatatatataaatttcatagttatatgtcctcgcagaacataaatattg  8195200  Previous    Next  AGI:  At3g23050.1    Description:  IAA7 (AUXIN RESISTANT 2); transcription factor. Identical to Auxin-responsive protein IAA7 (IAA7) [Arabidopsis Thaliana] (GB:Q38825;GB:Q8LAK1); similar to IAA14 (SOLITARY ROOT), transcription factor [Arabidopsis thaliana] (TAIR:AT4G14550.1); similar to auxin-responsive protein IAA [Brassica rapa] (GB:BAF81520.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 8194686    to: 8197160    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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