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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
RAV1(1)
--------->
MYB52(1)
--------->
ANAC55(2)
--------->
ANAC55(1)
--------->
bZIP60(2)
-----
<---------
ANAC55(2)
-----
--------->
ANAC58
<-----
<-----------
GT1
--------->
ANAC58
<------
--------->
ARR11(3)
--------->
O2
<---------
GLK1(1)
------->
YAB1
--------->
ANAC46
<-----------
GT1
agaataacttgacttcatacatactatttgaattcggatagtatcacaaaacatcactaccacgtaactgttggaacttcaattttacaaagtatttccg
8194300
<-----------------
AGL3
--------->
YAB1
<---------
YAB1
<---
<---------
ARR11(3)
----
--------->
ARR11(3)
<---
<----------
DOF2
--------->
YAB1
<----
<---------
DAG2
--------->
ICU4
<----
->
NtERF2
<---------
KAN4(2)
<----
---->
LBD16
--------->
ZAT14
--------->
YAB1
-----
----
RAP2.6(2)
<---------
ZAT14
--------->
YAB1
<---------
HSFB2a(1)
-------
---
LBD16
<---------------------
WRI1
--------->
YAB1
<---------
GLK1(2)
<--------
gctaacttttcggcgagtttttcagtgaagtttgtcacaaaaataagaatgatcatatttttggaatctttgtaatcgttttcaaagttttctctccgga
8194400
<--------
HAHB4
<---------
ARR14(2)
--------->
ANAC55(2)
--------->
ARR14(2)
<---------
ANAC55(2)
<-----------
HVH21
<---------
LBD16
<-----------
GT1
--------->
TOE1(1)
--------->
ANAC46
-------
TaMYB80
--------->
ATHB51
------>
ZmHOX2a(1)
<---------
LBD16
----->
GLK1(1)
<---------
ICU4
------>
ZmHOX2a(2)
<-----------
GT1
------
GLK1(1)
--------->
YAB1
----------->
HVH21
<---------
AHL20(2)
-------
ARR10
<--------
ATHB1
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
LBD16
-----
GLK1(2)
<---------
ATHB12
--------->
ANAC55(2)
--------->
AHL20(2)
--------->
LBD16
-----
ARR14(2)
--------->
ICU4
<---------
YAB1
--------->
ARR14(2)
<---------
ICU4
---->
ARR14(2)
<---------
ATHB51
<---------
YAB1
<---------
ARR14(2)
--------->
YAB1
--------->
YAB1
-->
LBD16
--------->
AHL20(2)
--------->
ICU4
----------->
RAV1(2)
--------->
AHL20(2)
--------->
AtLEC2
-
LBD16
--------->
YAB1
--------->
YAB1
<---------
At4g35610
--------->
YAB1
<---------
LBD16
<---
ttttcgcggttctacaataattacattacatatcatgatcaatatgtgacctgatcctcgtagttaattaaaacataatttcccggtcaccattcaaaac
8194500
<--------
------->
MYC3
------->
MYC4
<-------
MYC4
<-------
MYC2
<-------
MYC3
------->
MYC2
------->
PIF5
<-------
PIF5
============
--------->
TGA1a
<---------
TGA1a
============
--------->
O2
--------->
MYB52(1)
>>>>>>>>>>
HY5
<---------
WOX13(1)
<---------
O2
--------->
TOE2(3)
-------->
HAHB4
--------->
ANAC55(2)
--------->
At4g35610
--------->
ATHB12
<---------
ALFIN1
<---------
HSFC1(1)
--------->
TOE2(3)
--------->
ICU4
--------->
ANAC58
<---------
HSFB2a(2)
--------->
ARR11(3)
<---------
YAB1
--------->
ANAC58
--------->
HSFB2a(2)
<---------
ARR11(3)
<---------
ATHB12
<---------
ATHB12
-
-------
DOF2
<-----------
GT1
<---------
YAB1
--------->
MYB52(1)
<---------
MYB52(2)
>>>>>>>>>>>>>>
tttctagatggaagattaacaaaacaaaattatcttagcttaattttgtagtaacagagaagaaatgattaactaacatctaatcaagcccacgtgtcat
8194600
------------>
CBF
--------->
ANAC58
------>
MYB46(1)
--------->
ANAC46
------>
MYB83
--------->
ANAC58
<---------
ALFIN1
------->
PIF4
<---------
ALFIN1
<-------
PIF4
--------->
AtMYB61
------->
PIF5
<---------
ALFIN1
--------->
AtMYB61
<-------
PIF5
--------->
ANAC46
--------->
ATHB51
------------>
CBF
------->
MYC2
--------->
ANAC46
--------->
ATHB12
--------->
MYB46(3)
<-------
MYC3
--------->
ANAC58
<---------
YAB1
------>
NtERF2
------->
MYC3
--------->
ANAC58
--------->
AHL20(2)
---
HVH21
<---------
ATHB12
---------->
DOF2
--------->
ANAC58
--------->
MYB46(3)
<---------
AHL20(2)
===========================
bZIP_DOF
<-------
MYC2
<---------
ALFIN1
------>
ZmHOX2a(1)
===========================
bZIP_DOF
<-------
MYC4
<-------
TEIL
--------->
AtMYB61
*
TSS
<---------
ICU4
-------->
ANAC46
---------->
DOF2
------->
TEIL
--------->
ANAC46
<---------
MYB55(2)
<---------
YAB1
>>>>>>
HY5
----------->
GT1
--------->
AtLEC2
--------->
ANAC58
------>
NtERF2
------>
ZmHOX2a(1)
aaaccccaccaatgaagaaaaaagagcaaaagacatgcacatgcaattacacgaatacatacaccccaccaccatcctccctcct
tatattattattgcc
8194700
--------->
ATHB12
<---------
YAB1
<---------
MYB52(2)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC55(1)
---------
<<<<<<<<<
TBF1
--------->
ANAC58
---------
<----------
DOF2
<----------
DOF2
--------->
YAB1
------>
ZmHOX2a(2)
----
------>
ZmHOX2a(1)
<---------
DAG2
<---------------
AGL15
------->
TEIL
ccttcctctcctttcttcttcccctcttaccttttcagagagagaaacaatatttctaatctattacaagtaac
atgatcggccaacttatgaacctcaa
8194800
---------->
DOF2
----------->
HVH21
<------
NtERF2
<----------
CDC5
------>
NtERF2
<---------
At4g35610
--------->
At4g35610
<---------
ANAC46
--------->
ATERF1(1)
<------
NtERF2
--------->
RAP2.3(1)
<---------
RAP2.6(1)
------>
NtERF2
<---------
ATERF1(1)
<---------
RRTF1(1)
<---------
RAP2.3(1)
<---------
DEAR4(2)
<---------
ORA47(2)
<---------
RRTF1(3)
<---------
RAP2.3(3)
<---------
RRTF1(2)
<---------
RAP2.3(2)
--------->
ANAC58
<---------
DEAR3(1)
<---------
MYB46(3)
--------->
ATERF1(2)
--------->
ALFIN1
<---------
GLK1(1)
--------->
DEAR3(1)
<---------
ANAC46
--------->
GLK1(1)
<---------
ATERF1(2)
<------
NtERF2
--------->
ZAT2
<---------
ABI4(1)
<-------
GAMYB
--------->
At4g35610
--------->
ATERF1(1)
<---------
MYB46(3)
<---------
At4g35610
<------
NtERF2
--------->
MYB55(2)
<---------
ZAT2
<---------
ATERF1(1)
<---------
DEAR4(2)
-
--------->
ANAC58
------>
NtERF2
<---------
DEAR3(2)
-----
--------->
ANAC58
--------->
LBD16
<---------
DREB2C(2)
<-----
--------->
ANAC46
--------->
ANAC46
<---------
DEAR3(1)
--------->
ARR14(2)
<---------
LBD16
<---------
DEAR3(1)
<---------
ARR14(2)
<---------
ARR14(2)
>
TOE1(3)
<---------
LBD16
--------->
At4g35610
<---------
ABI4(1)
--------->
HSFC1(2)
---
>
TOE2(3)
<-----------
HVH21
<---------
ERF1
--------->
ARR14(2)
<---------
HSFC1(2)
<--
----->
ANAC46
------>
NtERF2
<---------
DEAR3(1)
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
ANAC46
ggccacggagctctgtctcggcctccccggcggcgctgaagcagttgagagtcctgccaaatcggcggtgggaagcaagagaggcttctccgaaaccgtt
8194900
----
------>
ZmHOX2a(1)
--------->
HSFC1(2)
<---------
HSFC1(2)
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
===========
--------->
ARR11(3)
============
--------->
WRKY12
<------
ZmHOX2a(2)
<---------
MYB52(1)
<---------
ARR11(3)
<-------
GAMYB
<---------
GLK1(2)
<---------
ANAC46
--------->
At4g35610
--------->
ARR11(3)
----->
ZmHOX2a(2)
<------
NtERF2
<---------
At4g35610
--------->
ARR14(2)
---->
WRKY12
--------->
YAB1
--------->
HSFC1(2)
<-----------
RAV1(1)
<---------
ARR14(2)
----
MYB52(1)
--------->
HSFB2a(1)
--------->
ARR14(2)
---------->
DOF2
------>
ARR11(3)
<---------
HSFB2a(1)
<---------
ARR14(2)
--------->
TOE1(3)
-------
ARR11(3)
---------->
DOF2
<---------
ARR11(3)
--------->
TOE2(3)
gatctcatgctcaatcttcaatctaacaaagaaggctccgttgatctcaaaaacgtttctgctgttcccaaggagaagactacccttaaagatccttcta
8195000
xxxxxxxxxxxxxxxx>
smallRNA(i)
<---------
RVE1(1)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ALFIN1
--------->
TOE2(3)
<---------
At4g35610
--------->
AHL20(1)
--------->
At4g35610
<---------
ARR11(3)
--------->
ANAC58
--------->
ARR11(3)
------>
ZmHOX2a(1)
<---------
AHL20(2)
--------->
ARR11(3)
----------->
RAV1(2)
--------->
AHL20(2)
<---------
ARR11(3)
----->
ANAC46
--------->
ANAC58
<---------
AHL20(2)
----------->
GT1
--------
==========
HOX2a_HOX2a
--------->
AHL20(2)
<---------
AHL20(2)
--------->
DAG2
<-----------
GT1
==========
HOX2a_HOX2a
--------->
AHL20(2)
<---------
GLK1(2)
---------->
DOF2
<-----------
GT1
<--
agcctcctgctaa
gtaagctacacatttacatatatatatattcttagattttttttttttttggttaaaaagttcttagttttttccagtccatatata
8195100
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
ARR14(2)
--------->
KAN4(2)
--------->
ARR14(2)
<---------
ANAC55(2)
--------->
KAN4(1)
--------->
ANAC55(2)
<---------
KAN4(1)
<---------
ANAC58
--------->
HSFB2a(1)
<---------
ANAC58
<----------
TaMYB80
<---------
ANAC55(1)
<---------
HSFB2a(1)
<-------
TEIL
<---------
KAN4(2)
<-----------
GT1
---------->
TaMYB80
->
AHL20(2)
--------->
ANAC46
<---------
ARR11(3)
<---------
AHL20(1)
-----
TEIL
<-----------
GT1
--------->
ARR11(3)
--------->
ARR11(3)
------>
ZmHOX2a(1)
tacatatatacgtgtttatacacatctatgtctaagttcttagaatattcgaatatatataaatttcatagttatatgtcctcgcagaacataaatattg
8195200
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AGI:
At3g23050.1
Description:
IAA7 (AUXIN RESISTANT 2); transcription factor. Identical to Auxin-responsive protein IAA7 (IAA7) [Arabidopsis Thaliana] (GB:Q38825;GB:Q8LAK1); similar to IAA14 (SOLITARY ROOT), transcription factor [Arabidopsis thaliana] (TAIR:AT4G14550.1); similar to auxin-responsive protein IAA [Brassica rapa] (GB:BAF81520.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525)
Range:
from: 8194686
to: 8197160
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.