Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------RAP2.6(3)                                                                --------->RAP2.6(2)                                                               --------->SPL7                                                            --------->DEAR3(1)                                                            --------->MYB46(3)                                                           --------->DEAR3(2)                                                          --------->MYB52(1)                                                         --------->ANAC46                                                         <---------ALFIN1                                                       ----------->RAV1(1)      --------->ANAC58                                                       --------->AtMYB61        --------->ANAC58         <---------YAB1                                <---------ALFIN1         --------->ANAC46  <--    <-----------GT1          ---------->DOF2          <------NtERF2           ---------->DOF2 <------ ------>TEIL           --------->ARR11(3)           --------->RAP2.3(3)  <----------DOF2     <------- ------->GT1       ---------->DOF2   ---------->DOF2--------->PCF2      <---------DAG2 --------------   cgtatataactattatttgagaaaagaaattgaaagctataaaggctaatagagcccccacaccggccgtcttcccttttgaaagcaacttggtaccttt  4810500                                              --------->ATHB12      ----------->GT1      ------>ZmHOX2a(2)                      <------ZmHOX2a(2)      <---------ANAC46    <---------ARR11(3)                      <---------ARR11(3)   <---------AtMYB61    --------->ARR11(3)                --------->GLK1(2)       <---------AtMYB61                ------ ---------GT1                      <-------TEIL        <----------DOF2                        <------ ----DOF2      <---------SPL7     --------->CCA1(2)   ------>ZmHOX2a(2)             <---------ANAC46 --DAG2       <---------ANAC58   --------->ARR14(2) --------->ARR11(3)            <---------ANAC46 ->AtSPL8     <---------ANAC58   <---------ARR14(2) <---------ARR11(3)      <-----------RAV1(1)<-----   taacttgatcttacatccgtaccagtgtgtttacagatacaatctggatcatttgatctttgttttggtggtgtttatatgttgttgtgtaatcgaatga  4810600                                                                                    <---------TOE2(3)                                                                                    <---------YAB1                                                                               <---------ICU4                                                          ----------->HVH21   <---------ATHB51                              <-------GAMYB<-------TEIL <---------ANAC55(2)   <---------AHL20(2)                             <---------MYB46(3)    <---------ICU4             --------->AHL20(2)    <                   --------->ANAC46     <------MYB46(1) <---------ANAC58      <---------ATHB12     --                   --------->ANAC58     <------MYB83    --------->ANAC55(2)   --------->ICU4 <------NtERF2 --->ATHB12        --------->ANAC58    <---------------AtSPL8               ------>MYB46(1) ------>NtERF2 ---ATHB12       ---------->DOF2       --------->MYB59  <---------ANAC58    ------>MYB83 <------MYB46(1) ----ICU4      <-------TEIL <---------AtMYB61   --------->YAB1            <---------MYB59<------MYB83   tttcttcatcgtataggttcaaagccagagatggttgtaatttggtacattgatacttacttgacattgaagattaccaaataattaagcttggtgccaa  4810700                           <---------ANAC46                     ---------->DOF2                       <---------ANAC55(1)                  <---------ARR11(1)                       <---------ANAC58          --------->AHL20(2)                       --------->ANAC55(2)       <---------AHL20(2)        --------->YAB1   <------MYB83                       <---------ANAC55(2)      <---------WOX13(1)    --------->AHL20(2)    <------MYB46(1)                       <---------ANAC58     <---------WOX13(1)>>>>>>>>>RAP2.2              --------->MYB59               <---------AHL20(2)          <-------GAMYB    <-----------ARR10              <---------TOE2(3)           <---------AHL20(2)             <---------MYB46(3)<---------ARR14(2)      --------->YAB1          <---------AHL20(2) ----------->GT1<--------P      <---------ARR11(3)  --------->ATHB12 ---------AHL20(2)     <---------ANAC46   --------->MYB55(2)--------->ARR14(2) <---------YAB1 ------->AHL20(2) <----------DOF2        <---------AtMYB61 <---------CCA1(2) <---------CCA1(2)   attaaaacgttttttattttcttttacgtgtgtgtaaaatatggtggttgattaattgtgcatatctaaagataaaatcatatcattgaaaattaggttt  4810800                                                                ------->PIF5                 <---------ARR11(3)                        --------->ANAC58                 --------->ARR11(3)                        --------->AtLEC2           --------->ALFIN1               ------>ZmHOX2a(1)--------->ANAC58           <---------ZAT6          <------------CBF     <---------ATHB12         <---------ANAC46        <---------YAB1         --------->ICU4       <------NtERF2             <---------AHL20(2) <-------TEIL<-------PIF5     <---------LBD16          --------->AHL20(1)    ------------>CBF<----------DOF2--------->YAB1   <     --------->ETT(1)  <-----------HVH21  <----------DOF2--------->YAB1<-----------GT1         ------     <---------ANAC46 <----------DOF2  ---------->ID1 --------->WOX13(1) --------->ZAT6       -------   gattttgtcgggagtgtaagttctctttcacatatattattgtccttttgtagatgcaatcatgcaagtgctttaacacttccattcatactctctataa  4810900                                                                                                   <-                                                                                                 ----                                                                                     --------->ANAC58                                               --------->MYB46(3)        <-----------GT1--------->MYB52(1) -----------GT1                       <---------ICU4                 <----------DOF2 --------->ANAC58 --->AHL20(2)                 *TSS  --------->ARR11(3)           <----------DOF2     --------->ANAC46 ---->TBP         --------->AtMYB61 --------->GLK1(2)    <---------CCA1(2)<-----------GT1        <---   attcacttcatcacttctcaccaaaacccttcacaaataatcttgtccaacaatctctcatttctctctttcttttttccttcccatgcgcaacgaagaa  4811000                                                                                           --------->LBD16                                                                                           ------>NtERF2                                                                                         <---------LBD16                                                                                         <------NtERF2                                          --------->YAB1                                 --------->ATERF1(1)                                         <---------ATHB12                               <---------ATERF1(1)                                       --------->WOX13(1)                              <---------PCF2                                    ------>ZmHOX2a(2)                                  <---------ARR14(2)                                   <------ZmHOX2a(2)                                  <------NtERF2                                  --------->ARR14(3)                              <---------TGA1a                                  <---------ARR14(2)                              <---------O2-------                                  <-----------ARR10                     --------->ZAT18--------->ARR14(2)                                  <---------AGP1                    --------->LBD16  <---------ATERF1(1)                                  <---------ARR14(3)               <-----------RAV1(2)--------->ATERF1(1)                                  --------->ARR11(3)            --------->AtMYB61 <---------bZIP60(2) ---------DOF2                    --------->ARR14(2)          <---------ARR11(3)  --------->ZAT2 ----->HSFC1(2)               <---------At4g35610             --------->ARR11(3) <---------TOE2(3) ------HSFC1(2)    <----------DOF2<---------ARR11(3)   ----------->GT1  <-------TEIL--------->ALFIN1   gctttcttctcccaacattctcttttggattcagaagatctcaatcagcaatggaaacagttaagacctccaggttcactactgaggtggctccggctaa  4811100          <------NtERF2         ------>NtERF2                                    <----------DOF2               <---------ZAT14         ----------->RAV1(1)                        <------ZmHOX2a(1)                   --------->ZAT14        ----------->HVH21                        --------->LBD16<----------DOF2     <---------ALFIN1 -------------->WRI1                             --------->HSFB2a(2)        <-----------HVH21   gtttatatcggcgacaagagaaccattcaagaacatgttgacaacaatctccgaggaagactttgactttgatgaactagtcagagccactgcagagaga  4811200                                                    <------ZmHOX2a(2)                           ================================HOX2a_HOX2a                           ------>ZmHOX2a(1)       --------->ARR11(3)                         ----------->RAV1(2)       <---------ARR11(3)                        ===================================HOX2a_HOX2a                        ------>ZmHOX2a(1)    ------>NtERF2                       <---------ALFIN1     --------->ANAC58                     ------>ZmHOX2a(1)      --------->ANAC46                    <---------ALFIN1        --------->ANAC58        --------------->AGL15                  <---------ATERF1(1) <---------ZAT18      <---------GLK1(2)                 --------->ARR14(2)   --------->ZAT18    ------->GAMYB                             <-   ctctcttcttcttgtccaggctcctcctcctggtctcttgctcactacgccaagatcaacagagtctcttcttcttagagcattcaattgccatcccaaa  4811300                         <--------ATHB1          <----------DOF2--------->YAB1    ------>ZmHOX2a(2)       <-----------GT1  <---------ATHB51 --------->ARR11(3)                  <-----------GT1    <---------AHL20(2)  <---------ATHB12 <---------ARR11(3)     --------->At4g35610 ------->TEIL       <---------------------WRI1               --------->At4g35610 ------TEIL     <----------DOF2---------->DOF2               <---------At4g35610          <---------MYB46(3)   atgcatttttttctttctctttttcaataataccaaagaagatgatctgtttgtaatctcttcagcatcagagtttttttatctacttcgcgttgttgaa  4811400  Previous    Next  AGI:  At3g14395.1    Description:  unknown protein Range:  from: 4810930    to: 4811663    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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