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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
RAP2.6(3)
--------->
RAP2.6(2)
--------->
SPL7
--------->
MYB46(3)
--------->
DEAR3(1)
--------->
DEAR3(2)
--------->
MYB52(1)
--------->
ANAC46
<---------
ALFIN1
----------->
RAV1(1)
--------->
ANAC58
--------->
AtMYB61
--------->
ANAC46
<---------
YAB1
<---------
ALFIN1
--------->
ANAC58
<--
<-----------
GT1
---------->
DOF2
<------
NtERF2
---------->
DOF2
<------
------>
TEIL
--------->
ARR11(3)
--------->
RAP2.3(3)
<----------
DOF2
<-------
------->
GT1
---------->
DOF2
---------->
DOF2
--------->
PCF2
<---------
DAG2
--------------
cgtatataactattatttgagaaaagaaattgaaagctataaaggctaatagagcccccacaccggccgtcttcccttttgaaagcaacttggtaccttt
4810500
--------->
ATHB12
----------->
GT1
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ANAC46
<---------
ARR11(3)
<---------
ARR11(3)
<---------
AtMYB61
--------->
ARR11(3)
--------->
GLK1(2)
<---------
AtMYB61
------
---------
GT1
<-------
TEIL
<----------
DOF2
<------
----
DOF2
<---------
SPL7
--------->
CCA1(2)
------>
ZmHOX2a(2)
<---------
ANAC46
--
DAG2
<---------
ANAC58
<---------
ARR14(2)
<---------
ARR11(3)
<---------
ANAC46
->
AtSPL8
<---------
ANAC58
--------->
ARR14(2)
--------->
ARR11(3)
<-----------
RAV1(1)
<-----
taacttgatcttacatccgtaccagtgtgtttacagatacaatctggatcatttgatctttgttttggtggtgtttatatgttgttgtgtaatcgaatga
4810600
<---------
YAB1
<---------
TOE2(3)
<---------
ICU4
----------->
HVH21
<---------
AHL20(2)
<-------
GAMYB
<-------
TEIL
<---------
ANAC58
--------->
AHL20(2)
<---------
MYB46(3)
<---------
ICU4
--------->
ICU4
<------
NtERF2
--------->
ANAC58
<------
MYB46(1)
<---------
ANAC55(2)
<---------
ATHB51
<
--------->
ANAC46
<------
MYB83
--------->
ANAC55(2)
<---------
ATHB12
--
--->
ATHB12
--------->
ANAC58
<---------------
AtSPL8
------>
MYB83
<------
MYB46(1)
---
ATHB12
---------->
DOF2
--------->
MYB59
<---------
ANAC58
------>
MYB46(1)
------>
NtERF2
----
ICU4
<-------
TEIL
<---------
AtMYB61
--------->
YAB1
<---------
MYB59
<------
MYB83
tttcttcatcgtataggttcaaagccagagatggttgtaatttggtacattgatacttacttgacattgaagattaccaaataattaagcttggtgccaa
4810700
<---------
ANAC46
---------->
DOF2
<---------
ANAC55(1)
<---------
ARR14(2)
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
--------->
YAB1
<------
MYB83
<---------
ANAC58
<---------
WOX13(1)
--------->
AHL20(2)
<------
MYB46(1)
<---------
ANAC55(2)
<--------
P
<---------
ARR11(3)
<---------
TOE2(3)
<---------
AHL20(2)
<-------
GAMYB
<-----------
ARR10
--------->
MYB59
<---------
AHL20(2)
--------->
MYB55(2)
<---------
ARR11(1)
--------->
YAB1
<---------
AHL20(2)
----------->
GT1
<---------
WOX13(1)
>>>>>>>>>
RAP2.2
--------->
ATHB12
---------
AHL20(2)
<---------
ANAC46
<---------
MYB46(3)
--------->
ARR14(2)
<---------
YAB1
------->
AHL20(2)
<----------
DOF2
<---------
AtMYB61
<---------
CCA1(2)
<---------
CCA1(2)
attaaaacgttttttattttcttttacgtgtgtgtaaaatatggtggttgattaattgtgcatatctaaagataaaatcatatcattgaaaattaggttt
4810800
------->
PIF5
--------->
ARR11(3)
--------->
AtLEC2
<---------
ARR11(3)
--------->
ANAC58
<---------
ZAT6
<----------
DOF2
--------->
YAB1
--------->
ALFIN1
<------------
CBF
<---------
ATHB12
<---------
ANAC46
<---------
AHL20(2)
--------->
ICU4
<-----------
GT1
<------
NtERF2
<---------
YAB1
------------>
CBF
<----------
DOF2
--------->
ETT(1)
--------->
AHL20(1)
<-------
TEIL
<-------
PIF5
------
<---------
LBD16
<-----------
HVH21
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
YAB1
<
<---------
ANAC46
<----------
DOF2
---------->
ID1
--------->
WOX13(1)
--------->
ZAT6
-------
gattttgtcgggagtgtaagttctctttcacatatattattgtccttttgtagatgcaatcatgcaagtgctttaacacttccattcatactctctataa
4810900
<-
<---
--------->
ANAC58
--------->
MYB46(3)
<-----------
GT1
--------->
MYB52(1)
--->
AHL20(2)
<---------
ICU4
<----------
DOF2
--------->
ANAC46
-----------
GT1
*
TSS
--------->
ARR11(3)
<----------
DOF2
--------->
ANAC58
---->
TBP
--------->
AtMYB61
--------->
GLK1(2)
<---------
CCA1(2)
<-----------
GT1
----
attcacttcatcacttctcaccaaaaccc
ttcacaaataatcttgtccaacaatctctcatttctctctttcttttttccttcccatgcgcaacgaagaa
4811000
--------->
LBD16
------>
NtERF2
--------->
ATERF1(1)
<---------
LBD16
--------->
YAB1
<------
NtERF2
<---------
ATHB12
<---------
ATERF1(1)
--------->
WOX13(1)
<---------
PCF2
------>
ZmHOX2a(2)
<---------
ARR14(2)
<------
ZmHOX2a(2)
<------
NtERF2
--------->
ARR14(3)
--------->
ZAT2
<---------
AGP1
<---------
bZIP60(2)
<-----------
ARR10
<-------
TEIL
<---------
ATERF1(1)
<---------
ARR14(3)
--------->
LBD16
--------->
ALFIN1
<---------
ARR14(2)
<-----------
RAV1(2)
--------->
ATERF1(1)
--------->
ARR14(2)
--------->
AtMYB61
<---------
O2
-------
---------
DOF2
<---------
ARR11(3)
<---------
ARR11(3)
<---------
TGA1a
------
HSFC1(2)
<---------
At4g35610
--------->
ARR11(3)
<---------
TOE2(3)
----->
HSFC1(2)
<----------
DOF2
--------->
ARR11(3)
----------->
GT1
--------->
ZAT18
--------->
ARR14(2)
gctttcttctcccaacattctcttttggattcagaagatctcaatcagca
atggaaacagttaagacctccaggttcactactgaggtggctccggctaa
4811100
<------
NtERF2
----------->
RAV1(1)
<----------
DOF2
--------->
ZAT14
------>
NtERF2
<------
ZmHOX2a(1)
<---------
ZAT14
----------->
HVH21
--------->
LBD16
<----------
DOF2
<---------
ALFIN1
-------------->
WRI1
--------->
HSFB2a(2)
<-----------
HVH21
gtttatatcggcgacaagagaaccattcaagaacatgttgacaacaatctccgaggaagactttgactttgatgaactagtcagagccactgcagagaga
4811200
<------
ZmHOX2a(2)
================================
HOX2a_HOX2a
------>
ZmHOX2a(1)
<---------
ARR11(3)
----------->
RAV1(2)
--------->
ARR11(3)
------>
ZmHOX2a(1)
------>
NtERF2
===================================
HOX2a_HOX2a
<---------
ALFIN1
--------->
ANAC58
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
ALFIN1
--------->
ANAC58
--------------->
AGL15
<---------
ATERF1(1)
--------->
ZAT18
<---------
GLK1(2)
--------->
ARR14(2)
<---------
ZAT18
------->
GAMYB
<-
ctctcttcttcttgtccaggctcctcctcctggtctcttgctcactacgccaagatcaacagagtctcttcttcttag
agcattcaattgccatcccaaa
4811300
--------->
YAB1
<----------
DOF2
<--------
ATHB1
------>
ZmHOX2a(2)
<-----------
GT1
<---------
ATHB12
--------->
ARR11(3)
<-----------
GT1
<---------
AHL20(2)
<---------
ATHB51
<---------
ARR11(3)
--------->
At4g35610
------->
TEIL
<---------------------
WRI1
--------->
At4g35610
------
TEIL
<----------
DOF2
---------->
DOF2
<---------
At4g35610
<---------
MYB46(3)
atgcatttttttctttctctttttcaataataccaaagaagatgatctgtttgtaatctcttcagcatcagagtttttttatctacttcgcgttgttgaa
4811400
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AGI:
At3g14395.1
Description:
unknown protein
Range:
from: 4810930
to: 4811663
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.