Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------WRKY38(1)                                                                  <---------WRKY12                                                               <---------MYB46(3)                                                              <---------AtMYB61                                                              --------->ALFIN1                                                        --------->ATERF1(1)                                                        <------NtERF2                                                      <---------ANAC46                                                      <---------DEAR3(1)                                                     <---------LBD16    <----------DOF2                                  <------NtERF2----------->HVH21 ---------TOE2(3)                                    --------->ATERF1(1) ----------GT1                                      <---------ATERF1(1)                             < --------DOF5.7(2)                                 <---------DEAR3(1)                           <---- ----->DOF5.7(2)                                   <---------RAP2.3(2)                         ------ ------DOF2                          <----------DOF2<---------ORA47(2)                         ------ >ZmHOX2a(2)                ------>NtERF2          <---------RAP2.6(2)                         <----- ->ARR14(2)               <---------ABI4(2)       <---------ORA47(1)<---------LBD16            ------ --AGP1<---------YAB1     --------->MYB46(3)      --------->RAP2.6(3)                        <------- --ARR14(2)             --------->ANAC46          --------->SPL7  --------->ETT(2)           <-------GAMYB ->ARR11(3)             --------->ANAC58       <---------HSFB2a(2)<---------DEAR3(1)    --------->ARR14(2) --ARR11(3)             --------->ANAC58<---------TOE2(3)  <------ZmHOX2a(1)            <---------ARR14(2) -CCA1(2)    <---------ANAC58     <---------ARR11(3)<---------RAP2.3(1)            <---------ARR14(2) ->ARR10     <---------ANAC58<------NtERF2     --------->HSFB2a(2)<---------ETT(2) --------->ARR14(2)   ttaacgcttttgatttcgttctcaagaagccaccgagttctttaggtttctggacggcggaggagtggtcgacggatgatgttcgaatcggtttcggttg  4619900                                          <---------LBD16                                          --------->LBD16                                         <---------ANAC46                                         <---------ANAC58                                        <---------DEAR3(1)                              --------->CCA1(2)                             --------->ARR11(1)                             --------->ARR11(3)                             <---------ARR11(3)        >>>>>>>>>TBF1        <---------ARR14(2)   XXXXXXXXXXXXXXXXXXXX>MIR854A-E     <---------SPL7 ---------------------WRI1   --------->ARR14(2)     <---------At4g35610<---------ARR14(2) ---GAMYB                   <---------HSFB2a(1)    ------->TEIL    <------ZmHOX2a(1) --->MYB55(2)              ----------->ARR10       --------->GLK1(2)   --------->GLK1(2) --->MYB52(2)         --------->At4g35610<---------ANAC58  --------->ANAC58                    <----- ----MYB46(3)      ---------->DOF2   <---------ANAC58      --------->ANAC58          --------->At4g35610 --->MYB111(2)   <------ZmHOX2a(1)   <---------ANAC58 ----------->HVH21--------->ARR14(2)--------->ARR11(3) --MYB52(1)   <------ZmHOX2a(1)      --------->ATERF1(1)  <---------LBD16          --------->YAB1   ttgacgagaagaagaaggaggagaagcggaagatttggagcgtccgtggaatgaatctgactcggaagaggagaatccgcttgaatcagaagagctagag  4620000                                    --------->HSFB2a(2)                                    <---------HSFB2a(2)        ----------->HVH21                                 ------>ZmHOX2a(2)            <------NtERF2                                <<<<<<<<<GATA-1               --------->At5g28300                                <<<<<<<<<GATA-2             <---------DEAR3(1)                                <<<<<<<<<GATA-4             <---------ANAC46                                <<<<<<<<<GATA-3            <------NtERF2                      -------                                <------ZmHOX2a(2)          <---------ABI4(1)            ------>ZmHOX2a(2)                                <---------GLK1(1)         <---------RAP2.3(1)         <---------ARR11(3)                               <---------ARR11(3)        <---------DEAR3(1)           --------->ARR14(2)                               <---------AGP1 <---------DEAR3(1)         <------ZmHOX2a(1) <---------ANAC46                               --------->ARR11(3)        <---------RAP2.3(2)          <---------ARR14(2)                              <---------CCA1(2)         <---------At4g35610           --------->ARR11(3)                            <---------HSFB2a(2)         --------->At4g35610           <---------ARR14(3)                            --------->HSFB2a(2) <------NtERF2<---------MYB46(3)   <-----------GT1                         ===============HOX2a_HOX2a<-------GAMYB         ======================HOX2a_HOX2a                         ==============HOX2a_HOX2a<---------MYB46(3)     =====================HOX2a_HOX2a                         ------>ZmHOX2a(1)   --------->At4g35610      --------->CCA1(2)<------ZmHOX2a(2) ----ZAT6  ---------->DOF2  ------>ZmHOX2a(1)<---------At4g35610  <---------WOX13(1)  --------->ARR14(3)   ttggaatgtctgagaaagtctgtcttcctcctagatctctcgaaatcagcggcgattgagcggcggtgatagataggagagatttcacgatcttcgtgta  4620100                  <---------MYB46(3)                                                      <------MYB83               <------MYB46(1)                                                            <------MYB46(1)               <------MYB83                                       <---------ARR14(2)     <---------AtMYB61               <---------MYB46(3)                         <---------ANAC46            --------->ARR14(2)              <---------AtMYB61                           --------->ALFIN1            --------->ARR11(1)        <---------ANAC58                               --------->ALFIN1               <---------ARR14(2)        <---------ANAC58                              <------ZmHOX2a(1)             ----------->ARR10        <---------ANAC46                  <---------ARR14(2)     <------ZmHOX2a(1) <--------P <------        --------->ANAC55(2)               --------->ARR14(2)--------->ALFIN1      --------->At5g28300     <---------MYB52(1)<---------YAB1  <---------WOX13(1)--------->ALFIN1        ----------->GT1 <--- -->REM1(2)<---------MYB46(3) <<<<<<<<<TBF1         --------->ALFIN1<---------HSFB2a(1)  --------->MYB59   gagaagcgttacgttgttggtggtgatgcttcttcttcttgatggattcgaggggaggagggggggaggaatcgtcgatggagcggtagatttggtcgag  4620200                                                                                                   --                                       --------->CCA1(2)       <---------------AGL15               <-                                      <---------ARR11(3)       --------------->AGL15              ---                                      --------->ARR11(3)      ----------------->AGL1             <---                               --------->At4g35610            ----------------->AGL3         <------ZmHOX2a(1)          ---------->DOF2      <---------At4g35610          =====================================HOX2a_HOX2a       <------ZmHOX2a(1)  <---------MYB46(3)                ============================HOX2a_HOX2a--     <---------ANAC46    --------->ALFIN1 <---------TOE2(3) ------>ZmHOX2a(2)             <------ZmHOX2a(1)  --------->ALFIN1       <---------DEAR3(1)               <---------ARR11(3)      --------->ARR14(2) ---HSFB2a(2)            <---------AtMYB61--------->MYB59 --------->ARR11(3)      <---------ARR14(2) ---ZmHOX2a(1)       <---------At5g28300  <---------TOE1(3)--------->GLK1(1)     <------ZmHOX2a(1)<--   gagagtggaggagaaagaagggttacggtggtgagatgaagatttaggtttctcccaagtgatctccattagagggaagaagaggaaatggaggaggaag  4620300                                                                           <-------MYC3                                                                           ------->MYC4                                                                           <-------MYC4                                                                           ------->PIF5                                                                           <-------MYC2                                                                           <-------PIF5                                                                           ------->MYC2                                                                          <---------ANAC55(2)                                                                          --------->O2                                                                          <--------ABF1                                                                          =================bZIP_DOF                                                                          --------->bZIP60(2)                                                                          <---------O2                                                                          <---------TGA1a                                                                          --------->TGA1a                                                                          --------->ANAC55(2)                                                                          <<<<<<<<<<AtMYC2                                                                          <<<<<<<<<<HY5                                                                          <<<<<<<<<<ABI5                                                                   <------------CBF                                                                  -------->ATHB1            <---------At4g35610                                   --------->ATHB12            <---------ZAT14                     --------->ANAC58  --------->YAB1            --------->At4g35610                 --------->ANAC46  <---------ICU4 ------->GLK1(1)                       <---------ANAC46          <---------YAB1     <---------HSFB2a(2) --------GLK1(1)                     ----------->GT1             <---------ATHB12   --------->HSFB2a(2) ------>ARR14(2)                   <-------GAMYB--------->ANAC58 --------->ICU4 <----------DOF2 ---ZmHOX2a(1) --------->At4g35610--------->ALFIN1           ----------------------->TaNAC69(2) ------->CCA1(2)          ---------->DOF2   <-----------GT1 ----------->GT1------->MYC3 -------ARR14(2)  <------ZmHOX2a(1)=================================================MYC_MYB      ----   gatatgtgagagagagcagaggaagacagaaagagtgtgttgtttataacaaggcagacaagtggtaatcattgccacgtgtctttctcgacaactctct  4620400                                                                      --------->At5g28300                                     <-----------GT1       <---------YAB1                                     <---------At5g28300  --------->AHL20(2)                                    <-----------GT1       <---------AHL20(2)                                <----------DOF2           <-----------TBP                            --------->YAB1             <---------AHL20(1)                          ------>MYB83                 --------->AHL20(1)        ----------->RAV1(1)<---------ATHB12            --------->ARR11(3)     --------->PCF2      --------->WOX13(1)            <---------ARR11(3)    --------->SPL7      --------->MYB46(3)           --------->ARR11(3)   ---------->ARF1      --------->AtMYB61            --------->AHL20(1)  <-----------HVH21    ------------>CBF              <---------ARR11(3) --------->bZIP60(2)--------->MYB46(3)               <---------AHL20(1)       <-------TEIL       ---- -->NtERF2--------->ANAC46------>MYB46(1)    <----------DOF2         ----------->GT1  <-------TEIL   gcctcgtcccccacaaaactaaaccaccaatcatctttttaccctctcttttaaaaatatttttatactcatggtaaaaatacatatatacatgatcaaa  4620500                                  --------->DAG2                                 ---------->DOF2                        <------------CBF                     <---------TOE2(3)<---------ARR14(2)                       --------->ATHB51                      --------->ANAC55(2)        <------ZmHOX2a(2)                       --------->ATHB12                      <---------ANAC55(2)       --------->ARR11(3)                      <---------YAB1              <---------YAB1  --------->ANAC58     <---------ARR11(3)     <---------TOE2(3)--------->ICU4  ----------->GT1   <------ZmHOX2a(1)     --------->MYB52(1) ---- ----->YAB1 <----------DOF2   <----------ARF1  ----------->GT1    --------->ANAC58 ---------->DOF2   cagaactgatgtttctttcatgttattattgggagaaaagttgtttaaaatgtttataggattacggtatgcaagacgaatatcggaaagatcaaaaatc  4620600                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                                                          -----                    --------->ARR11(3)                                                          -----                    --------->AGP1                                                              <----                    <---------ARR11(3)                                                   <---------GLK1(1)               ------>ZmHOX2a(2)                        <---------TOE2(3)                --------->GLK1(1)             --------->ARR11(3)                  <---------TOE2(3)                --------->ATHB12    ----------->GT1 <---------AGP1        <---------TOE2(3)                      --------->ICU4 <---- ------>DOF2 <---------ARR11(3)           <---------TOE1(3)                ---------->DOF2     <-----   aaagcttagtaaaatgatctaagatctatatgtatgaaaatggtaaggtttaagaattaagaattttgtcttgaaccaaaagaattatgggatatcactg  4620700     <---------ANAC55(2)     <---------HSFB2a(2)     --------->ANAC55(2)                     <---------GLK1(2)     --------->HSFB2a(2)           --------->ANAC58                                   <---------TOE2(3) ---->ZAT2                    ----------->HVH21                                      ---------->DOF2 ---->ZAT14                 --------->ANAC55(2)<-------TEIL                   ---------->DOF2 -----ZAT2                <-----------GT1  <---------ATHB12               ----------->GT1 -----ZAT14 --------->At4g35610    --------->ANAC46                      --------->DAG2 ------RAV1(1)      <----------DOF2--------->ANAC58                     ---------->DOF2             -   ctgggttacagaacagcttagactttattcacatgacacgacccaaagattcacttatatgtgttccctacttataaagtaaaagattaaagttgttcct  4620800  Previous    Next  AGI:  At3g13980.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69469.1) Range:  from: 4619045    to: 4620269    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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