Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------LBD16       --------->LBD16      <---------ANAC58                                                     --------->YAB1          --      <---------ANAC58                                                    <---------YAB1           <-      <---------ANAC55(1)                                               --------->YAB1         <-----      <---------ANAC46                    <---------TOE1(3)       <---------ANAC55(2)         <------ --------WOX13(1)                         <---------TOE2(3)       --------->ANAC55(2)      --------->AHL20(2) ----->ATHB12 <---------ICU4     ----------->HVH21               --------------->AtSPL8    <---------AHL20(2) -AHL20(2)   --------->ICU4    ----------->GT1       ---------->ID1  ------->TEIL    ----------->RAV1(1)   gattgattccgtgggattatgacctatgtgagactgtgacatttgaggtttttttggccctctgtgttatgtactcatcatagaatgcgacattttttta  4128000                          --------------->AGL15                         <-----------------AGL1                         ----------------->AGL2                   <---------YAB1                --------->ICU4               <---------TOE2(3)         <---------YAB1  <-----------------AG     <---------AHL20(2)  ----------------->AG   <---------AHL20(2)    ----------------->AGL1                   --------->DEAR3(1)   --------->AHL20(2)    <-----------------AGL2                <---------ALFIN1 ------->AHL20(2)-------->HAHB4                               <---------ZAT18                     <-- --------AHL20(2)--------->YAB1      --------->ZAT6           <---------WRKY38(1)<---------CCA1(2)<-- ----AHL20(2) --------->YAB1        --------->GLK1(1)        --------->PCF5   <---------ZAT6 <------- ---AHL20(2)<---------YAB1<---------------AGL15     <----------DOF2  <---------ALFIN1<----------DOF2   tttatatatatatgattaatgatcaatgccaatttgggaactctagtaagtatgcttttagtggtccacccccatttctagtcttatcttttcgataatt  4128100                                                         <---------ZAT2                                                     <-----------HVH21                                                    --------->ANAC58                                                    --------->ANAC58                                                 <---------ATHB12                                                ------>MYB83                                             --------->MYB46(3)                                             <---------ATHB12                                             <---------MYB55(2)                                            -------->P   --------->At4g35610                                            --------->ANAC58                                            --------->ANAC58                                            ------>MYB46(1)                                            ------>MYB83 --------->ZAT2                                           --------->MYB55(1)                         <---------ARR11(3)                                          --------->MYB46(3)                          --------->ARR11(3)                                          <---------MYB111(1)              --------->TOE2(3)                                       <-----------GT1   <---------At4g35610       --------->AHL20(2)                               <---------ANAC58 ------>MYB46(1)          --------->GLK1(2) -------ANAC58           --------->GLK1(2)<---------MYB111(2)            --------->ARR11(3)         - -------ANAC58         --------->MYB46(3) <---------MYB46(2)             <---------ARR11(3)      ---- --ICU4    <-----------GT1     <---------ANAC58--------->WOX13(1)       --------->RVE1(1)       -----   tcgtttctcatttattccattctcaacaatcttgcctgataataccaaccaatcaagtcagctccattttttaaaaatcttagaataaaatctaaacaac  4128200                --------->KAN4(1)                --------->HSFC1(2)                <---------HSFC1(2)                <---------HSFB2a(1)                    <-----------GT1      ------>ZmHOX2a(2)       - --------->ANAC46--------->KAN4(2)           <---------AtLEC2              <------ZmHOX2a(2)       <- ------>GAMYB   <---------KAN4(1)        <---------ANAC58                 --------->ARR14(2)       -- ------->RAV1(1)--------->HSFB2a(1)      <---------ANAC58                 ------->TEIL          <---- ---->MYB46(3) <---------KAN4(2)         <---------ANAC46                 <---------ARR14(2)    -----   aacacacagtgatagagaacattcggctatggaattagaagttgcctgcatgtttattatctgtctatctgatatggatccttgaaacaggcccatttcg  4128300                                                                                           <---------                                                       <---------AHL20(2)         <---------TOE2(3)                                                       --------->AHL20(1)         ----------->GT1 -------->CCA1(2)                                      <---------AHL20(1)  <---------ARR11(3) --------ARR11(3)                              <---------ANAC46       --------->AHL20(2)   ---------- ------->ARR11(3)                         <---------TOE1(1)         <------------CBF--------->AHL20(2) -----HSFB2a(2)                         --------->CCA1(2)     --------->ZAT6<---------YAB1 <--------- ---->HSFB2a(2) ----------->GT1      <---------YAB1    --------->AHL20(2)  --------->ARR11(3)    ----   agatattagaggcccaaaacgaaaataagaaataagcccatgatacgatgtgtgtaattaattaacacaaaattgaatatcattaagttaatacttttat  4128400                                                                                                   <-                                                                                                  ---                                      <---------ANAC46                                           ----                                    <---------WRKY18(1)                                         <----                                  <----------DOF2                                               <----                            --------->ARR14(2)                                                  -----                       <---------ARR11(3)                                                   <--------                       --------->ARR11(3)                                                   <--------                      --------->GLK1(1)                                                    --------->DEAR3(1)                      <---------CCA1(1)                                                  <---------At5g28300                      <---------GLK1(1)                                                ----------->HVH21                      --------->CCA1(1)                                             <-----------HVH21   ---------->DOF2    --------->RVE1(1)                                        <---------ALFIN1------ ------AGL15          <---------RVE1(1)                                   <---------At4g35610  <----- ----->AGL15         <---------ARR11(3)                  --------->TOE1(2)<---------HSFB2a(1) <------ -DOF2               --------->ARR11(3)                  --------->TOE2(2)--------->At4g35610 ------- ----->YAB1   *TSS  <<<<<<<<<RAP2.2----------->HVH21    --------->MYB46(3)--------->HSFB2a(1)--------   cagaacaaaggcgaagggttttagatatcttatccgcttgacgagtagagttttcgaaaccagcgagattaatggcatcttccaccggtctcaccgtcgc  4128500       <---------ANAC58       <---------ANAC58      --------->ZAT2 <---------ZAT2 --------->At4g35610 <---------At4g35610 --------->ZAT2 <---------GLK1(1) --------->GLK1(1) -----NtERF2 ------>LBD16    --------->ARR14(2) ----->DEAR3(1)  <---------GLK1(2) --NtERF2        <---------ARR11(3) -----LBD16      <---------ARR14(2) ---->ATERF1(1)  --------->ARR11(3) ---HVH21      ----------->ARR10 -ATERF1(1)<---------LBD16          --------->ARR14(2) >NtERF2<----------DOF2          <----------DOF2 ----ATERF1(1)<------NtERF2    <---------At4g35610                                      ------->GAMYB ---DEAR3(1) --------->LBD16   --------->ZAT2                       --------->ATHB12 ----------->RAV1(1) -->DEAR3(1)--------->ETT(1)   <---------ZAT2                   <<<<<<<<<TBF1  --------->TOE2(3) ->ATERF1(1)<---------ANAC46   --------->At4g35610    ---------->DOF2   <-----------HVH21       <----   cggagctctgcttgccggagattttcgattaccagctgtatcgtctctaatacccagaaagacttcttcttcattgtcatgccttagcaacagagattta  4128600                                                                            --------->ALFIN1                                                                            <---------ANAC46                                                                          <-----------RAV1(1)                                                                --------->LBD16                    <------NtERF2                              --------->ANAC58                <-------GAMYB                                  <---------ANAC55(2)               <-----------RAV1(1)                             --------->ANAC55(1)         --------->ATHB51                                      --------->ANAC46         <---------ICU4                                        --------->ANAC58        <---------YAB1    <---------ARR14(2)                  <---------LBD16          <---------At4g35610     ------>ZmHOX2a(1)------>NtERF2                          --------->MYB52(1)        --------->At4g35610 -------GT1    <---------MYB46(3)           <-----------GT1<---------MYB52(2)   ---------->DOF2   tcgtctccttataattgctgttggcgactatccagaggcaaaattttgacttctctcagtaactcacggaaatttgctgtgggaaaggaagcagaagatg  4128700                                                                                                -----                                                                                    <------MYB46(1)                                                                                    <------MYB83<----                                                                                    <---------ANAC58                                                                            ----------->GT1     <----                                          --------->AtLEC2             <---------HSFC1(1)      ------                                        <---------ANAC58               --------->HSFC1(1)      <-----              <------ZmHOX2a(2)         <---------ANAC58               --------->HSFB2a(2)     ------          --------->SPL7             <-----------GT1                   >>>>>>>ZML2  <---------ANAC58        <---------SPL7  <---------At5g28300                            <---------HSFB2a(2)     <-----      --------------->AtSPL3<---------MYB52(1)         --------->At5g28300<------ZmHOX2a(1)  <-------   ggtttctatcggtacgatcaaactcttaccgtttcgattttgccttgcaatttctacagtaattgtatttgttctaggaagtaatttggtgcgaattacc  4128800        <---------YAB1   --------->ANAC55(2)   <---------ANAC55(2) ---------->AGL15                                                   <---------ZAT14             <---- -----MYB59                                       <------MYB83      <---------ZAT18             ----- -----------AGL15                                 <---------MYB46(3)--------->ZAT18      --------->ICU4 ----------->AGL1                                 <------MYB46(1)   --------->ZAT14  --------->ARR14(2) ----ANAC55(2)                           <---------ANAC46          <---------ANAC46  <---------ARR14(2) --->ANAC55(2)                       --------->At4g35610      <---------ANAC58       <---------ARR11(3) ------------AG                     --------->ALFIN1  ----------->HVH21              --------->ARR11(3) ----GT1--------->ICU4      <----------DOF2 <---------ZAT14   <---------ANAC58     ----------->ARR10   tgattaagtaatgcttaagaaagattagaactttagaagtgctgagtatagttggtttgacaatgcgttgtgcagaatgtgagcgaagatactgatgaga  4128900  Previous    Next  AGI:  At3g12930.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94112.1); contains InterPro domain Iojap-related protein (InterPro:IPR004394) Range:  from: 4128414    to: 4129963    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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