Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------LBD16       --------->LBD16      <---------ANAC46                                                     --------->YAB1          --      <---------ANAC55(1)                                                 <---------YAB1           <-      <---------ANAC58                                                  --------->YAB1         <-----      <---------ANAC58                    <---------TOE1(3)       --------->ANAC55(2)         <------ --------WOX13(1)                         <---------TOE2(3)       <---------ANAC55(2)      --------->AHL20(2) ----->ATHB12 <---------ICU4     ----------->HVH21               --------------->AtSPL8    <---------AHL20(2) -AHL20(2)   --------->ICU4    ----------->GT1       ---------->ID1  ------->TEIL    ----------->RAV1(1)   gattgattccgtgggattatgacctatgtgagactgtgacatttgaggtttttttggccctctgtgttatgtactcatcatagaatgcgacattttttta  4128000                          --------------->AGL15                         <-----------------AGL1                         <-----------------AG                   <---------YAB1                --------->ICU4               <---------TOE2(3)         <---------YAB1  <-----------------AGL2     <---------AHL20(2)  ----------------->AG   <---------AHL20(2)    ----------------->AGL2                   --------->DEAR3(1)   --------->AHL20(2)    ----------------->AGL1                <---------ALFIN1 ------->AHL20(2)--------->YAB1                               <---------WRKY38(1)                 <-- --------AHL20(2)-------->HAHB4      --------->ZAT6           <---------ZAT18    <---------CCA1(2)<-- ----AHL20(2) --------->YAB1        --------->GLK1(1)        --------->PCF5   <---------ZAT6 <------- ---AHL20(2)<---------YAB1<---------------AGL15     <----------DOF2  <---------ALFIN1<----------DOF2   tttatatatatatgattaatgatcaatgccaatttgggaactctagtaagtatgcttttagtggtccacccccatttctagtcttatcttttcgataatt  4128100                                                         --------->At4g35610                                                     <-----------HVH21                                                    --------->ANAC58                                                    --------->ANAC58                                                 <---------ATHB12                                                ------>MYB83                                             <---------ATHB12                                             <---------MYB55(2)                                             --------->MYB46(3)                                            ------>MYB83 <---------At4g35610                                            ------>MYB46(1)                                            --------->ANAC58                                            -------->P   --------->ZAT2                                            --------->ANAC58                                           --------->MYB55(1)                         --------->ARR11(3)                                          <---------MYB111(2)                         <---------ARR11(3)                                          <---------MYB111(1)                      --------->AHL20(2)                                       <-----------GT1   <---------ZAT2    --------->TOE2(3)                               <---------ANAC58 ------>MYB46(1)          <---------ARR11(3) -------ANAC58           --------->GLK1(2)<---------MYB46(2)             --------->ARR11(3)         - -------ANAC58         --------->MYB46(3) --------->MYB46(3)             --------->GLK1(2)       ---- --ICU4    <-----------GT1     <---------ANAC58--------->WOX13(1)       --------->RVE1(1)       -----   tcgtttctcatttattccattctcaacaatcttgcctgataataccaaccaatcaagtcagctccattttttaaaaatcttagaataaaatctaaacaac  4128200                --------->HSFB2a(1)                <---------HSFB2a(1)                --------->KAN4(1)                <---------KAN4(1)                      <-----------GT1      ------>ZmHOX2a(2)       - --------->ANAC46--------->KAN4(2)           <---------AtLEC2              <------ZmHOX2a(2)       -- ------>GAMYB   <---------HSFC1(2)       <---------ANAC58                 <---------ARR14(2)       <- ------->RAV1(1)--------->HSFC1(2)       <---------ANAC46                 --------->ARR14(2)    <---- ---->MYB46(3) <---------KAN4(2)         <---------ANAC58                 ------->TEIL          -----   aacacacagtgatagagaacattcggctatggaattagaagttgcctgcatgtttattatctgtctatctgatatggatccttgaaacaggcccatttcg  4128300                                                                                           ----------                                                       <---------AHL20(2)         <---------TOE2(3)                                                       <---------AHL20(1)         ----------->GT1 -------->CCA1(2)                                      --------->AHL20(2)  --------->ARR11(3) ------->ARR11(3)                              <---------ANAC46       --------->AHL20(2)   <--------- --------ARR11(3)                         <---------TOE1(1)         <------------CBF--------->AHL20(2) -----HSFB2a(2)                         --------->CCA1(2)     --------->ZAT6<---------YAB1 <--------- ---->HSFB2a(2) ----------->GT1      <---------YAB1    --------->AHL20(1)  <---------ARR11(3)    ----   agatattagaggcccaaaacgaaaataagaaataagcccatgatacgatgtgtgtaattaattaacacaaaattgaatatcattaagttaatacttttat  4128400                                                                                                   <-                                                                                                  ---                                      <---------ANAC46                                           ----                                    <---------WRKY18(1)                                         <----                                  <----------DOF2                                               -----                            --------->ARR14(2)                                                  <----                       <---------ARR11(3)                                                   <--------                       --------->ARR11(3)                                                   <--------                      --------->GLK1(1)                                                    --------->DEAR3(1)                      <---------CCA1(1)                                                  <---------At5g28300                      <---------GLK1(1)                                                ----------->HVH21                      --------->CCA1(1)                                             <-----------HVH21   ---------->DOF2    --------->RVE1(1)                                        <---------ALFIN1<----- ----->AGL15          <---------RVE1(1)                                   <---------HSFB2a(1)  ------ ------AGL15         --------->ARR11(3)                  --------->TOE1(2)<---------At4g35610 ------- -DOF2               <---------ARR11(3)                  --------->TOE2(2)--------->At4g35610 <------ ----->YAB1   *TSS  <<<<<<<<<RAP2.2----------->HVH21    --------->MYB46(3)--------->HSFB2a(1)--------   cagaacaaaggcgaagggttttagatatcttatccgcttgacgagtagagttttcgaaaccagcgagattaatggcatcttccaccggtctcaccgtcgc  4128500       <---------ANAC58       <---------ANAC58      --------->ZAT2 <---------ZAT2 <---------At4g35610 --------->At4g35610 <---------GLK1(1) --------->GLK1(1) --------->ZAT2 -----NtERF2 ------>LBD16    --------->ARR14(2) ----->DEAR3(1)  <---------GLK1(2) --NtERF2        <---------ARR11(3) ---->ATERF1(1)  <---------ARR14(2) -----LBD16      --------->ARR11(3) ---HVH21      ----------->ARR10 -ATERF1(1)<---------LBD16          --------->ARR14(2) ----ATERF1(1)<------NtERF2      <----------DOF2 >NtERF2<----------DOF2        <---------ZAT2                                           ------->GAMYB -->DEAR3(1) --------->LBD16   <---------At4g35610                  --------->ATHB12 ----------->RAV1(1) ---DEAR3(1)--------->ETT(1)   --------->At4g35610              <<<<<<<<<TBF1  --------->TOE2(3) ->ATERF1(1)<---------ANAC46   --------->ZAT2         ---------->DOF2   <-----------HVH21       <----   cggagctctgcttgccggagattttcgattaccagctgtatcgtctctaatacccagaaagacttcttcttcattgtcatgccttagcaacagagattta  4128600                                                                            <---------ANAC46                                                                            --------->ALFIN1                                                                          <-----------RAV1(1)                                                                --------->LBD16                    <------NtERF2                              --------->ANAC55(1)                <-------GAMYB                                  --------->ANAC46               <-----------RAV1(1)                             --------->ANAC58         --------->ATHB51                                      <---------ANAC55(2)         <---------ICU4                                        --------->ANAC58        <---------YAB1    <---------ARR14(2)                  <---------LBD16          <---------At4g35610     ------>ZmHOX2a(1)------>NtERF2                          --------->MYB52(1)        --------->At4g35610 -------GT1    <---------MYB46(3)           <-----------GT1<---------MYB52(2)   ---------->DOF2   tcgtctccttataattgctgttggcgactatccagaggcaaaattttgacttctctcagtaactcacggaaatttgctgtgggaaaggaagcagaagatg  4128700                                                                                                -----                                                                                    <---------ANAC58                                                                                    <------MYB46(1)                                                                                    <------MYB83<----                                                                            ----------->GT1     <----                                          --------->AtLEC2             --------->HSFC1(1)      ------                                        <---------ANAC58               <---------HSFC1(1)      <-----              <------ZmHOX2a(2)         <---------ANAC58               <---------HSFB2a(2)     ------          --------->SPL7             <-----------GT1                   >>>>>>>ZML2  <---------ANAC58        <---------SPL7  <---------At5g28300                            --------->HSFB2a(2)     <-----      --------------->AtSPL3<---------MYB52(1)         --------->At5g28300<------ZmHOX2a(1)  <-------   ggtttctatcggtacgatcaaactcttaccgtttcgattttgccttgcaatttctacagtaattgtatttgttctaggaagtaatttggtgcgaattacc  4128800        --------->ICU4   --------->ANAC55(2)   <---------ANAC55(2) ---------->AGL15                                                   --------->ZAT18             ----- -----------AGL15                                 <---------MYB46(3)<---------ZAT18             <---- -----MYB59                                       <------MYB83      --------->ZAT14      --------->ICU4 ----------->AGL1                                 <------MYB46(1)   <---------ZAT14  <---------ARR14(2) ------------AG                          <---------ANAC46          <---------ANAC46  --------->ARR14(2) --->ANAC55(2)                       --------->At4g35610      <---------ANAC58       <---------ARR11(3) ----ANAC55(2)                      --------->ALFIN1  ----------->HVH21              --------->ARR11(3) ----GT1<---------YAB1      <----------DOF2 <---------ZAT14   <---------ANAC58     ----------->ARR10   tgattaagtaatgcttaagaaagattagaactttagaagtgctgagtatagttggtttgacaatgcgttgtgcagaatgtgagcgaagatactgatgaga  4128900  Previous    Next  AGI:  At3g12930.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94112.1); contains InterPro domain Iojap-related protein (InterPro:IPR004394) Range:  from: 4128414    to: 4129963    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.