Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->AGP1     <---------ARR14(3)     --------->ARR14(3)     <---------ARR14(2)     <-----------ARR10                    ---------->DOF2     --------->ARR11(3)            --------->YAB1     --------->ARR14(2)        <---------AHL20(2)     <---------ARR11(3)       --------->AHL20(2)   ----------->ARR10          --------->AHL20(1)                                  --------->YAB1 ---------->DOF2      <-----------GT1    <---------AHL20(2)                 --------->YAB1 ---AHL20(2)     <----------DOF2--------->YAB1                             <---------ATHB12         < -->AHL20(2)<<<<<<<<<TBF1     <---------AHL20(1)  --------->MYB52(1)--------->MYB46(3)              -   atagaaagatcttcttcttctttttttcaaaatataatcatattaaaagaagaaaccgagaatgaattgaaccacaaatcataaacataacatcaagttg  3351900                                                               --------->ANAC46                                                               --------->ANAC58                                                      --------->TOE2(3)                   ------->GAMYB                                                     ----------->GT1                   --------->MYB52(1)                                                --------->AHL20(1)                     ----------->RAV1(1)                                                --------->AHL20(2)                --------->GLK1(1)                                                <---------AHL20(2)           --------->ZAT2                                                <---------AHL20(1)           <---------At4g35610                                               <---------AHL20(2)            <---------ZAT2                                               --------->AHL20(2)            --------->At4g35610 ---------ARR11(3)               <---------GLK1(1)  <-------TEIL   <-----------------------TaNAC69(2) -------->ARR11(3)        <---------ZAT6   --------->AHL20(2)  --------->ANAC58   <---------GLK1(1)   aatatatacttccaaactttgtaaactagagatagaactccttgaaaaaataaattcgttaaaccaagaaacatgccgaagctgaaatccaacagaaaac  3352000                                             <---------YAB1                                  --------->ANAC58         --------->YAB1           --------->ANAC58         --------->TOE1(3)   --------->DEAR4(1)         --------->TOE2(3)   <---------ETT(1)<---------TOE2(3)                            --------->TOE2(3)        <---------ATHB12     --------->At1g77200                                <---------AHL20(2)    ------------>CBF         --------->DEAR3(1)--------->TOE2(3)                --------->AHL20(2) <-  <---------ZAT18            --------->DREB2C(2)  ---------->DOF2            ----------->GT1<--------  --------->ZAT18           --------->DEAR3(2)--------->YAB1       <------ZmHOX2a(1) <-------TEIL  --   atagtgcccaatcttaaacaaatatgtttcaccgacaagcttatattaacataaaagactaaaacatgaggagcacttgtagttaaatacatccttggta  3352100                                            <---------MYB46(3)                                         --------->MYB52(2)                                     --------->ANAC58                                     --------->ANAC46                                     <---------TGA1a                                     <---------ANAC55(2)                  <-----------GT1                                     --------->ANAC58               <---------AHL20(2)                                     --------->ANAC55(1)            <---------AHL20(1)                                     --------->TGA1a                --------->AHL20(1)                                     --------->ANAC55(2)           --------->AHL20(2)             --------->YAB1         <---------TOE2(2)             <---------YAB1          --------->ARR11(3)        <---------TOE1(2)           <---------ICU4  <---------TOE2(3)              --------->ANAC58               --------->YAB1               ------->TEIL --------AHL20(2)       <----------DOF2>>>>>>>>>NAP             -------->HAHB4      <----------DOF2 -TOE1(2) <---------ARR11(3)     --------->ANAC58              --------->ICU4      <-----------------AGL3 ------->AHL20(2)       =======================bZIP_DOF        <---------ATHB12   ---------->ID1   <-   ttttaatgtgaagatttataatccccctttgtgcctcgcacgtaagttgttagaggtctattcaaatgattatatttttccttcgtctttatatggaccc  3352200                       --------->YAB1                                                            <---                     ------>MYB83                                                  --------->CCA1(2)                     ------>MYB46(1)                                              <---------ARR14(2)         <---------ARR11(3)   --------->MYB52(1)                   ---------->DOF2--------->ARR14(2)      ----------->RAV1(1)   <---------MYB52(2)         ----------->GT1           <------ZmHOX2a(1) --------ALFIN1 --------->ANAC46                     ---------->DOF2        <---------DEAR3(1)  -----   tccaactccaacatctacaaaccaaacataactaacgagaaacttcaaaagaatacaaagaaaaattagaaaagagggacggaggatacaaatatgtcct  3352300        ---------->DOF2    --------->ANAC46                                                                                -   --------->SPL7                                                                                   -   --------->RAP2.6(3)                                                              --------->ZAT6 <-  --------->MYB52(1)                                                     --------->YAB1        <----- ------>ZmHOX2a(1)                                                      --------->ICU4         <----- <---------SPL7     <---------ANAC46              --------->SPL7        <---------ATHB12      <------ --------------AGL1 <---------ANAC58            <---------SPL7        --------->WOX13(1)     -------- ->ZmHOX2a(1)       <---------ANAC58     <---------ZAT2   ---------->DOF2<---------ICU4      <-------   ctccttacggcaaagtcgacgagcgtgaacatgtaaggctcgaagctcgtcgtaagacgagaaagaacatcgcaatcatcgctgtatcactagtcattct  3352400      --------->YAB1   <---------GLK1(2)   <---------ARR14(2)   --------->ARR14(2)                                                                               =  <------NtERF2                                                                                     < <---------RAP2.6(3)                                                                                - --------->LBD16                                                                                  <-- -------->LBD16                                                                                   --- -------->ETT(1)                                                                                 <--- --------LBD16  <---------ZAT2                                                                   ---- ----ANAC58     --------->At4g35610                                --------->YAB1                ==== ----ANAC58     --------->ZAT2                              --------->ZAT14 ------->GAMYB    <------- ---ICU4        <---------At4g35610                        --------->ALFIN1 ========================= ->ICU4     ------>ZmHOX2a(2)                    <---------At4g35610     --------->MYB52(1)  -------- --YAB1 <---------YAB1                           --------->At4g35610  --------->YAB1        <--------   tgccggaatcgtgatcggagctgtgtttggaaccatggctcacaagaagtcaccagagacagtggagactaataacaacggagactcaatctccgtttcc  3352500                   <---------ANAC58              --------->O2              --------->bZIP60(1)                                                                   <       <---------MYB52(1)                                                                          -- =======================bZIP_DOF                                                                   -- ---------DOF5.7(2)<---------ANAC55(2)                               --------->ANAC58             --- --------->DOF2    <---------ANAC58                                  --------->ANAC58             <-- -------MYB52(1)<---------MYB52(1)                               --------->ANAC58                 <-- ------>DOF5.7(2)  --------->ANAC55(2)                           --------->ANAC46               ----- ----GAMYB    ========================bZIP_DOF           <---------At4g35610              <---------ARR11(3) ----->LBD16  <---------O2 ---------->DOF2               --------->ZAT2                   --------->ARR11(3) =======================MYC_MYB                          --------->At4g35610            <---------ARR11(3) --ARR14(2)   --------->bZIP60(2)                     <------ZmHOX2a(2)                 --------->ARR11(3) =======================MYC_MYB                      <---------ARR14(2)            --------->LBD16--- ->ARR14(2)   <---------bZIP60(1)                    --------->ARR14(2)           <---------HSFB2a(2) -MYB52(1)    --------->TGA1a----------->GT1     <---------LBD16 --------->ANAC58 --------->HSFB2a(2)   gttaaagccgtttgcgacgttacgttgcataaagaaaaatgcttcgaaaccctcggatcagctccaaacgcaagcagtctcaatccagaagagctcttca  3352600       --------->YAB1 --------->ANAC58 --------->ANAC46 --------->ANAC58 -------TEIL ------->CCA1(2) ------->ARR14(1) ------>ARR14(2)          --------->HSFC1(2)                                                       <- -------GLK1(2)       --------->DEAR3(1)                                                          <-- -------ARR14(2)   ------->GAMYB                           ------>ZmHOX2a(1)                      --- ------>ARR10--------->YAB1     ---------->DOF2           --------->TOE2(3)                      <--- ------>ARR11(1)  --------->MYB46(3)          <----------DOF2         ---------->DOF2     ------->TEIL   gatacgcagtcaaaatcacaatcgccgaagtttcaaaagctatcaacgctttctcttcatccttaggcgatgaaaagaacaacatcaccatgaacgcttg  3352700                                                  --------->YAB1                                          <---------DOF5.7(2)              --------->LBD16                                        --------->DOF5.7(2)                =======================HOX2a_HOX2a                                       --------->TOE1(3)                   ------>ZmHOX2a(1)               --------->MYB52(1)      --------->TOE2(3)               --------->ARR14(2)               ------>MYB83           --------->ANAC55(1)              <---------ARR14(2)               ------>MYB46(1)        --------->ANAC58            <-----------GT1                <---             <---------MYB59          --------->ANAC46           ----------->HVH21         ------>ZmHOX2a(2)          <---------WRKY18(1)         <---------ANAC55(2)      <---------TGA2(1)           ----------   <---------At4g35610                --------->ANAC58         --------->TGA2(1)          --------->GLK1(1) ---------CDC5--------->MYB55(1)    <---------ALFIN1           --------->bZIP60(1)        <---------GLK1(1) -------At4g35610           --------->TOE2(3)     <---------ICU4<-----------HVH21        --------->ARR11(3) ------>At4g35610           --------->TOE1(3)--------->TOE2(3) <---------bZIP60(1)       <---------ARR11(3) ------ANAC46<---------MYB46(2)  --------->MYB46(3)    --------->MYB52(1)----------->RAV1(2)   ------   cgctgagcttcttgacctaacgatagataacctcaacaacacgttaacctcatcatcaaacggtgatgtcacggttcctgagctagtcgatgatctccgt  3352800  Previous    Next  AGI:  At3g10710.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G04960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46182.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 3352294    to: 3354242    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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