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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
AGP1
<---------
ARR14(3)
--------->
ARR14(3)
<---------
ARR14(2)
<-----------
ARR10
---------->
DOF2
--------->
ARR11(3)
--------->
YAB1
--------->
ARR14(2)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
----------->
ARR10
--------->
AHL20(1)
--------->
YAB1
---------->
DOF2
<-----------
GT1
<---------
AHL20(2)
--------->
YAB1
---
AHL20(2)
<----------
DOF2
--------->
YAB1
<---------
ATHB12
<
-->
AHL20(2)
<<<<<<<<<
TBF1
<---------
AHL20(1)
--------->
MYB52(1)
--------->
MYB46(3)
-
atagaaagatcttcttcttctttttttcaaaatataatcatattaaaagaagaaaccgagaatgaattgaaccacaaatcataaacataacatcaagttg
3351900
--------->
ANAC46
--------->
ANAC58
--------->
TOE2(3)
------->
GAMYB
----------->
GT1
--------->
MYB52(1)
--------->
AHL20(1)
----------->
RAV1(1)
--------->
AHL20(2)
--------->
GLK1(1)
<---------
AHL20(2)
--------->
ZAT2
<---------
AHL20(1)
<---------
At4g35610
<---------
AHL20(2)
<---------
ZAT2
--------->
AHL20(2)
--------->
At4g35610
---------
ARR11(3)
<---------
GLK1(1)
<-------
TEIL
<-----------------------
TaNAC69(2)
-------->
ARR11(3)
<---------
ZAT6
--------->
AHL20(2)
--------->
ANAC58
<---------
GLK1(1)
aatatatacttccaaactttgtaaactagagatagaactccttgaaaaaataaattcgttaaaccaagaaacatgccgaagctgaaatccaacagaaaac
3352000
<---------
YAB1
--------->
ANAC58
--------->
YAB1
--------->
ANAC58
--------->
TOE1(3)
--------->
DEAR4(1)
--------->
TOE2(3)
<---------
ETT(1)
<---------
TOE2(3)
--------->
TOE2(3)
<---------
ATHB12
--------->
At1g77200
<---------
AHL20(2)
------------>
CBF
--------->
DEAR3(1)
--------->
TOE2(3)
--------->
AHL20(2)
<-
<---------
ZAT18
--------->
DREB2C(2)
---------->
DOF2
----------->
GT1
<--------
--------->
ZAT18
--------->
DEAR3(2)
--------->
YAB1
<------
ZmHOX2a(1)
<-------
TEIL
--
atagtgcccaatcttaaacaaatatgtttcaccgacaagcttatattaacataaaagactaaaacatgaggagcacttgtagttaaatacatccttggta
3352100
<---------
MYB46(3)
--------->
MYB52(2)
--------->
ANAC58
--------->
ANAC46
<---------
TGA1a
<---------
ANAC55(2)
<-----------
GT1
--------->
ANAC58
<---------
AHL20(2)
--------->
ANAC55(1)
<---------
AHL20(1)
--------->
TGA1a
--------->
AHL20(1)
--------->
ANAC55(2)
--------->
AHL20(2)
--------->
YAB1
<---------
TOE2(2)
<---------
YAB1
--------->
ARR11(3)
<---------
TOE1(2)
<---------
ICU4
<---------
TOE2(3)
--------->
ANAC58
--------->
YAB1
------->
TEIL
--------
AHL20(2)
<----------
DOF2
>>>>>>>>>
NAP
-------->
HAHB4
<----------
DOF2
-
TOE1(2)
<---------
ARR11(3)
--------->
ANAC58
--------->
ICU4
<-----------------
AGL3
------->
AHL20(2)
=======================
bZIP_DOF
<---------
ATHB12
---------->
ID1
<-
ttttaatgtgaagatttataatccccctttgtgcctcgcacgtaagttgttagaggtctattcaaatgattatatttttccttcgtctttatatggaccc
3352200
--------->
YAB1
<---
------>
MYB83
--------->
CCA1(2)
------>
MYB46(1)
<---------
ARR14(2)
<---------
ARR11(3)
--------->
MYB52(1)
---------->
DOF2
--------->
ARR14(2)
----------->
RAV1(1)
<---------
MYB52(2)
----------->
GT1
<------
ZmHOX2a(1)
--------
ALFIN1
--------->
ANAC46
---------->
DOF2
<---------
DEAR3(1)
-----
tccaactccaacatctacaaaccaaacataactaacgagaaacttcaaaagaatacaaagaaaaattagaaaagagggacggaggatacaaat
atgtcct
3352300
---------->
DOF2
--------->
ANAC46
-
--------->
SPL7
-
--------->
RAP2.6(3)
--------->
ZAT6
<-
--------->
MYB52(1)
--------->
YAB1
<-----
------>
ZmHOX2a(1)
--------->
ICU4
<-----
<---------
SPL7
<---------
ANAC46
--------->
SPL7
<---------
ATHB12
<------
--------------
AGL1
<---------
ANAC58
<---------
SPL7
--------->
WOX13(1)
--------
->
ZmHOX2a(1)
<---------
ANAC58
<---------
ZAT2
---------->
DOF2
<---------
ICU4
<-------
ctccttacggcaaagtcgacgagcgtgaacatgtaaggctcgaagctcgtcgtaagacgagaaagaacatcgcaatcatcgctgtatcactagtcattct
3352400
--------->
YAB1
<---------
GLK1(2)
<---------
ARR14(2)
--------->
ARR14(2)
=
<------
NtERF2
<
<---------
RAP2.6(3)
-
--------->
LBD16
<--
-------->
LBD16
---
-------->
ETT(1)
<---
--------
LBD16
<---------
ZAT2
----
----
ANAC58
--------->
At4g35610
--------->
YAB1
====
----
ANAC58
--------->
ZAT2
--------->
ZAT14
------->
GAMYB
<-------
---
ICU4
<---------
At4g35610
--------->
ALFIN1
=========================
->
ICU4
------>
ZmHOX2a(2)
<---------
At4g35610
--------->
MYB52(1)
--------
--
YAB1
<---------
YAB1
--------->
At4g35610
--------->
YAB1
<--------
tgccggaatcgtgatcggagctgtgtttggaaccatggctcacaagaagtcaccagagacagtggagactaataacaacggagactcaatctccgtttcc
3352500
<---------
ANAC58
--------->
O2
--------->
bZIP60(1)
<
<---------
MYB52(1)
--
=======================
bZIP_DOF
--
---------
DOF5.7(2)
<---------
ANAC55(2)
--------->
ANAC58
---
--------->
DOF2
<---------
ANAC58
--------->
ANAC58
<--
-------
MYB52(1)
<---------
MYB52(1)
--------->
ANAC58
<--
------>
DOF5.7(2)
--------->
ANAC55(2)
--------->
ANAC46
-----
----
GAMYB
========================
bZIP_DOF
<---------
At4g35610
<---------
ARR11(3)
----->
LBD16
<---------
O2
---------->
DOF2
--------->
ZAT2
--------->
ARR11(3)
=======================
MYC_MYB
--------->
At4g35610
<---------
ARR11(3)
--
ARR14(2)
--------->
bZIP60(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
=======================
MYC_MYB
<---------
ARR14(2)
--------->
LBD16
---
->
ARR14(2)
<---------
bZIP60(1)
--------->
ARR14(2)
<---------
HSFB2a(2)
-
MYB52(1)
--------->
TGA1a
----------->
GT1
<---------
LBD16
--------->
ANAC58
--------->
HSFB2a(2)
gttaaagccgtttgcgacgttacgttgcataaagaaaaatgcttcgaaaccctcggatcagctccaaacgcaagcagtctcaatccagaagagctcttca
3352600
--------->
YAB1
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
-------
TEIL
------->
CCA1(2)
------->
ARR14(1)
------>
ARR14(2)
--------->
HSFC1(2)
<-
-------
GLK1(2)
--------->
DEAR3(1)
<--
-------
ARR14(2)
------->
GAMYB
------>
ZmHOX2a(1)
---
------>
ARR10
--------->
YAB1
---------->
DOF2
--------->
TOE2(3)
<---
------>
ARR11(1)
--------->
MYB46(3)
<----------
DOF2
---------->
DOF2
------->
TEIL
gatacgcagtcaaaatcacaatcgccgaagtttcaaaagctatcaacgctttctcttcatccttaggcgatgaaaagaacaacatcaccatgaacgcttg
3352700
--------->
YAB1
<---------
DOF5.7(2)
--------->
LBD16
--------->
DOF5.7(2)
=======================
HOX2a_HOX2a
--------->
TOE1(3)
------>
ZmHOX2a(1)
--------->
MYB52(1)
--------->
TOE2(3)
--------->
ARR14(2)
------>
MYB83
--------->
ANAC55(1)
<---------
ARR14(2)
------>
MYB46(1)
--------->
ANAC58
<-----------
GT1
<---
<---------
MYB59
--------->
ANAC46
----------->
HVH21
------>
ZmHOX2a(2)
<---------
WRKY18(1)
<---------
ANAC55(2)
<---------
TGA2(1)
----------
<---------
At4g35610
--------->
ANAC58
--------->
TGA2(1)
--------->
GLK1(1)
---------
CDC5
--------->
MYB55(1)
<---------
ALFIN1
--------->
bZIP60(1)
<---------
GLK1(1)
-------
At4g35610
--------->
TOE2(3)
<---------
ICU4
<-----------
HVH21
--------->
ARR11(3)
------>
At4g35610
--------->
TOE1(3)
--------->
TOE2(3)
<---------
bZIP60(1)
<---------
ARR11(3)
------
ANAC46
<---------
MYB46(2)
--------->
MYB46(3)
--------->
MYB52(1)
----------->
RAV1(2)
------
cgctgagcttcttgacctaacgatagataacctcaacaacacgttaacctcatcatcaaacggtgatgtcacggttcctgagctagtcgatgatctccgt
3352800
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AGI:
At3g10710.1
Description:
pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G04960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46182.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501)
Range:
from: 3352294
to: 3354242
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.