Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------At4g35610                                                          --------->TGA2(2)                                                         <-----------HVH21                                                         <-----------TGA1                                                        ===================================MYC_MYB                                                        <---------bZIP60(1)                                                        --------->TGA1a                                                        --------->TGA2(1)          <-------GAMYB                                                        <---------TGA1a           ===================                                                        --------->bZIP60(1)       ------>ZmHOX2a(2)                                                        --------->bZIP60(2)--------->ZAT2                                                        --------->ANAC58   <---------ZAT2                                                        --------->ANAC58   ----------->RAV1(2)                                                        <---------TGA2(1)  <---------At4g35610                                                        <---------O2 <-----------HVH21                                                        --------->O2<---------ANAC46                                                       <------NtERF2<---------ANAC58               --------->At4g35610                     <-----------STF1    --------->At4g35610               <---------At4g35610                    ------>NtERF2 <---------ANAC58             ----              --------->GLK1(2)                       <---------ATERF1(1)<-----------RAV1(2)     <---         <------ZmHOX2a(1)                  <---------HSFC1(2)   <-------PIF5     <---------MYB46(3) <------ZmHOX2a(1)    <------ZmHOX2a(1)     --------->HSFC1(2)   ------->PIF5   --------->ARR14(2)---   agaggagaagaggaagaagctgaaggagacgacttcgaagaccagtagcttcttggcgacgtcagcacttgcgtcgcagctggatcgttgttcgaggctg  2394300                                                                                     <---------ANAC58                                                                                     <---------ANAC55(2)                                                                                     <---------ANAC46                           ------>MYB83                                              <---------ANAC58                           ------>MYB46(1)                                           <---------ANAC55(1)                          --------->MYB52(1)                                  --------->ZAT18     ------>ZmHOX2a(1)   --------->AtMYB61                                --------->HSFB2a(2)       <    <---------LBD16---------->DOF2      <---------AtMYB61                --------->ETT(2)           < ===========HOX2a_HOX2a  --------->TOE1(2)                    <---------DOF5.7(2)    <---------bZIP60(2) ----->ALFIN1     <------ZmHOX2a(1)  <---------DEAR3(1)      <-------TEIL<---------ETT(2)           - --------RAV1(1)<---------TOE1(3)   <------NtERF2           --------->DOF5.7(2)      <---------O2<--- ------>ZAT14   <---------TOE2(3) <---------DEAR3(1)    <---------DOF5.7(2)   <---------ZAT18    <---   tgttgtcctggagtcgctaaggaaagaccaacgaagacggcgatggtgaagagagagttcacgttcacgagtccgtcgagagcgcttacgtggacacttg  2394400                                   <-----------TGA1                                  --------->bZIP60(1)                                  <---------TGA2(1)                                  <---------bZIP60(2)                                  <---------bZIP60(1)                                  >>>>>>>>>>HY5                                  --------->bZIP60(2)                                  --------->TGA1a                                  --------->TGA2(1)                                  <---------ANAC55(2)                                  --------->ANAC55(2)                                  ===============================MYC_MYB                                  <---------ANAC46                                  <---------TGA1a                                  --------->O2                                             --------->ZAT2                                  --------->ANAC58                                       ------>ZmHOX2a(2)                                  <---------O2                                          <------ZmHOX2a(2)                                  --------->ANAC58                                      --------->CCA1(2)                                 <-----------STF1           --------->DEAR3(1)         --------->AGP1            --------->ARR11(3)   ----------->STF1          <------NtERF2               <---------AGP1           <------ZmHOX2a(1)    <---------TGA2(2)          --------->ATERF1(1)         <---------ARR11(3)   <---------ANAC46            ----------->HVH21          <---------RAP2.3(1)          --------->ARR14(2)   <---------ANAC58            ----------->TGA1           ------>NtERF2                <-----------ARR10   <---------ANAC58          --------->At4g35610         --------->DEAR3(1)            --------->ARR11(3)  <------NtERF2              <---------At4g35610        --------->At4g35610            <---------ARR14(2) ---------ANAC46           <-----------RAV1(2)          <---------At4g35610           <---------CCA1(2) ---------DEAR3(1)     ------>NtERF2--------->TGA2(2) ---------->CDC5            --------->At4g35610- -------->ALFIN1      --------->ANAC58       --------->ANAC46            <---------DOF5.7(2)     ---- --------RAV1(1)      --------->ANAC58       --------->ANAC58  --------->WRKY18(1)   ----------->ARR10 ------AtMYB61        --------->ANAC46       --------->ANAC58 <-----------HVH21  <---------At4g35610-   tggtggcgagggaggatgttgaagacgcctctggtgacgtcattctcacgccgttctcagcgccggtcatgtagttaaccttcggctcagatctgctcgg  2394500                    ----------->GT1              --------->ANAC46              --------->ANAC58       ---------->DOF2       ---------->DOF2                                                      --- <----------ID1     <---------MYB46(3)                                                            <-- ----------->GT1   --------->ICU4                                                            -------- ---------->GT1    <---------ATHB12                                                          -------- ------>DOF2  --------->ANAC58                                   <---------ANAC58            -------- ----------------------->ANAC81       <---------WOX13(1)         <---------ANAC58   --------->GLK1(2)   aaagggaaaaaaagaaacgcaatggttaaaaaaaagatagattgattttagggaagagagagggtttgcttactcatacatgagggaatctatttaagca  2394600                    <---------ANAC58                    <---------ANAC58                 <------NtERF2        <----------DOF2       <---------ANAC58  <---------ANAC58       <---------ANAC58  <---------ANAC58                           --------->ARR14(2) ------>ICU4   <---------DEAR3(1)                            <----------DOF2 -------ATHB12<---------MYB52(1)          <---------ANAC58  <---------ANAC58 ->ANAC46    <-----------HVH21            <---------ANAC58  <---------ANAC58                      --- ->ANAC58   <---------ANAC58         --------->CCA1(2)    --------->ARR11(3)               ---------- ->ANAC58   <---------ANAC58    ---------->DOF2   ---------->DOF2--------->ETT(1)*TSS <---------CCA1(2)   atgagtttagctttccgtcggggcttagcttgaagaaagagatggattgtcttaaagagagagcttgtcggaaacactctctctctccctatctttgtac  2394700                             <-----------HVH21                             <-----------TGA1                            <---------O2                            ===============================bZIP_DOF                            --------->ANAC58                            ===============================bZIP_DOF                            --------->ANAC55(1)                            --------->ANAC58                            <---------TGA1a        <----------DOF2     --------->ANAC46        ==============================bZIP_DOF    <---------GLK1(2)       --------->bZIP60(2)   --------->ZAT2           --------->TGA1a         <-----------GT1   <---------ZAT2           --------->O2        <---------DAG2      <----------DOF2 ------>ANAC46       =================bZIP_DOF  <----------DOF2     <---------DAG2            ------- ----->AtSPL8        <----------DOF2     <---------MYB46(3) <-----------GT1         <-----------GT1   aaaccagcttctttgaggcatttcttttccacgtcacattaagttgttgactttttccgatttttcttctctttttgaattttgtttttctgtatgcagt  2394800                                               <-----------GT1                                          <---------ATHB12                                          <---------YAB1                                         <---------TOE2(3)                                        --------->YAB1                                <---------CCA1(1)                                <---------RVE1(1)                               --------->ARR11(3)                      <---------AHL20(2)                               <---------ARR11(3)                      --------->AHL20(1)                               <---------GLK1(2) <---------YAB1        --------->AHL20(2)                         <---------AHL20(2)--------->ATHB12           <---------AHL20(2)                 <---------ANAC58      <---------AHL20(2)             --------->AHL20(2)                 <---------ANAC46     <---------AHL20(2)            --------->YAB1          <--------  --------->TOE2(3)     --------->AHL20(2)--------->ICU4   <---------ALFIN1           <-----------GT1 ---->GT1        <---------ANAC58 <---------AHL20(2)     ----------->RAV1(1)      ------->TEIL   ----   caaatgttaatggatttttgggtgaatttaaaagattttttttaatgatttactattagcaacacttcataaataatttgaatgcatttttcaaatcact  2394900                                  <---------ARR11(3)                        <---------WOX13(1)                      --------->ATHB12                      -------->HAHB4                      <---------ICU4                                                            -----                      --------->YAB1                                                  <---------MYB59                     <---------YAB1                                                  --------->ANAC58         =================================================================================MADS_MADS -   <---------GLK1(2)<---------TOE2(3)                                           --------------->AtSPL8   --------->ARR11(3)--------->ICU4                                         <----------DOF2    <-----   <---------ARR11(3)<---------ATHB12                                     --------------->AGL15<----- <---------TOE2(3)<---------AHL20(2)              <----------ID1    <-------TEIL<---------------AtSPL8 ----------->ARR10--------->AHL20(2)     --------->WOX13(1)      <------ZmHOX2a(1)   --------->ANAC58 -ATHB12 --------------->AGL15    --------->ARR11(3)      --------->YAB1  <---------------AGL15<----- ----->YAB1      --------->AHL20(2)   <-----------GT1    <---------ATHB12----------------->AGL3<-----   aataagattttctcttaaaattaatgattaacttgagatttttcaatctaataagacaaatcatataggatacattcccttttaagtacccaattcgaag  2395000         --------->AHL20(2)         <---------AHL20(2) <---------TOE2(3) ------>GT1 --------->DOF2                                                                                    <- ----TOE1(2)                       ----------->HVH21                                            <---- ----TOE2(2)                      <---------WOX13(1)            ---------->DOF2            <---------ARR14(2) ----TOE2(3)        --------->ANAC58                  <---------TOE2(3)                   <---------GLK1(1) ----TOE1(3)        --------->ANAC58                 <-----------GT1                     <----------DOF2   gttaaagataaaaaattgtctcaagctatggatgggattgacacatataagcatataacgatgtacaaaaggagaagaaatatgagaattgcatttctga  2395100                                                              <---------MYB46(3)                                                             --------->ALFIN1                                                           <---------MYB46(3)                                                           <---------ANAC46                                                          --------->ALFIN1                                                          <---------AtMYB61                                                        <---------ANAC46                                                      <---------ANAC58                                                      <------MYB83                                                      <------MYB46(1)                                                      <---------ANAC58                                                      <---------ANAC46                                                     <---------MYB46(3)                          <---------At4g35610        <---------AtMYB61                          --------->At4g35610        --------->MYB46(2)                        <-----------RAV1(2)        <---------MYB52(1)                      <-----------HVH21        <---------ANAC46                  >>>>>>>GRF7                  <---------ANAC58       <------ZmHOX2a(1)               <-----------HVH21               <---------ANAC58      <----------ID1 -------P    <---------ARR11(3)              <-----------GT1 <---------ANAC46 -----TOE2(3)--------->ARR11(3)        <---------YAB1--------->MYB111(1)   ------->TEIL             -   ggtaagtgataagaagatgtcaggcttcagatgactgaattctcattttgcctgtttggtgtggtgggagaaggacgaatttctcttgcaaatcgatgac  2395200  Previous    Next  AGI:  At3g07510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81121.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16627.1) Range:  from: 2393697    to: 2394681    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g07520.1    Description:  ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4). Identical to Glutamate receptor 1.4 precursor (GLR1.4) [Arabidopsis Thaliana] (GB:Q8LGN1;GB:Q8LGN2;GB:Q9SRR4); similar to ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) [Arabidopsis thaliana] (TAIR:AT5G48410.1); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.2); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43244.1); contains InterPro domain Extracellular ligand-binding receptor (InterPro:IPR001828); c Range:  from: 2394897    to: 2398297    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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