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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
--------->
TGA2(2)
<-----------
HVH21
<-----------
TGA1
===================================
MYC_MYB
<---------
bZIP60(1)
--------->
TGA1a
--------->
TGA2(1)
<-------
GAMYB
<---------
TGA1a
===================
--------->
bZIP60(1)
------>
ZmHOX2a(2)
--------->
bZIP60(2)
--------->
ZAT2
--------->
ANAC58
<---------
ZAT2
--------->
ANAC58
----------->
RAV1(2)
<---------
TGA2(1)
<---------
At4g35610
<---------
O2
<-----------
HVH21
--------->
O2
<---------
ANAC46
<------
NtERF2
<---------
ANAC58
--------->
At4g35610
<-----------
STF1
--------->
At4g35610
<---------
At4g35610
------>
NtERF2
<---------
ANAC58
----
--------->
GLK1(2)
<---------
ATERF1(1)
<-----------
RAV1(2)
<---
<------
ZmHOX2a(1)
<---------
HSFC1(2)
<-------
PIF5
<---------
MYB46(3)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
--------->
HSFC1(2)
------->
PIF5
--------->
ARR14(2)
---
agaggagaagaggaagaagctgaaggagacgacttcgaagaccagtagcttcttggcgacgtcagcacttgcgtcgcagctggatcgttgttcgaggctg
2394300
<---------
ANAC58
<---------
ANAC55(2)
<---------
ANAC46
------>
MYB83
<---------
ANAC58
------>
MYB46(1)
<---------
ANAC55(1)
--------->
MYB52(1)
--------->
ZAT18
------>
ZmHOX2a(1)
--------->
AtMYB61
--------->
HSFB2a(2)
<
<---------
LBD16
---------->
DOF2
<---------
AtMYB61
--------->
ETT(2)
<
===========
HOX2a_HOX2a
--------->
TOE1(2)
<---------
DOF5.7(2)
<---------
bZIP60(2)
----->
ALFIN1
<------
ZmHOX2a(1)
<---------
DEAR3(1)
<-------
TEIL
<---------
ETT(2)
-
--------
RAV1(1)
<---------
TOE1(3)
<------
NtERF2
--------->
DOF5.7(2)
<---------
O2
<---
------>
ZAT14
<---------
TOE2(3)
<---------
DEAR3(1)
<---------
DOF5.7(2)
<---------
ZAT18
<---
tgttgtcctggagtcgctaaggaaagaccaacgaagacggcgatggtgaagagagagttcacgttcacgagtccgtcgagagcgcttacgtggacacttg
2394400
<-----------
TGA1
--------->
bZIP60(1)
<---------
TGA2(1)
<---------
bZIP60(2)
<---------
bZIP60(1)
>>>>>>>>>>
HY5
--------->
bZIP60(2)
--------->
TGA1a
--------->
TGA2(1)
<---------
ANAC55(2)
--------->
ANAC55(2)
===============================
MYC_MYB
<---------
ANAC46
<---------
TGA1a
--------->
O2
--------->
ZAT2
--------->
ANAC58
------>
ZmHOX2a(2)
<---------
O2
<------
ZmHOX2a(2)
--------->
ANAC58
--------->
CCA1(2)
<-----------
STF1
--------->
DEAR3(1)
--------->
AGP1
--------->
ARR11(3)
----------->
STF1
<------
NtERF2
<---------
AGP1
<------
ZmHOX2a(1)
<---------
TGA2(2)
--------->
ATERF1(1)
<---------
ARR11(3)
<---------
ANAC46
----------->
HVH21
<---------
RAP2.3(1)
--------->
ARR14(2)
<---------
ANAC58
----------->
TGA1
------>
NtERF2
<-----------
ARR10
<---------
ANAC58
--------->
At4g35610
--------->
DEAR3(1)
--------->
ARR11(3)
<------
NtERF2
<---------
At4g35610
--------->
At4g35610
<---------
ARR14(2)
---------
ANAC46
<-----------
RAV1(2)
<---------
At4g35610
<---------
CCA1(2)
---------
DEAR3(1)
------>
NtERF2
--------->
TGA2(2)
---------->
CDC5
--------->
At4g35610
-
-------->
ALFIN1
--------->
ANAC58
--------->
ANAC46
<---------
DOF5.7(2)
----
--------
RAV1(1)
--------->
ANAC58
--------->
ANAC58
--------->
WRKY18(1)
----------->
ARR10
------
AtMYB61
--------->
ANAC46
--------->
ANAC58
<-----------
HVH21
<---------
At4g35610
-
tggtggcgagggaggatgttgaagacgcctctggtgacgtcattctcacgccgttctcagcgccggtcat
gtagttaaccttcggctcagat
ctgctcgg
2394500
----------->
GT1
--------->
ANAC46
--------->
ANAC58
---------->
DOF2
---------->
DOF2
---
<----------
ID1
<---------
MYB46(3)
<--
----------->
GT1
--------->
ICU4
--------
---------->
GT1
<---------
ATHB12
--------
------>
DOF2
--------->
ANAC58
<---------
ANAC58
--------
----------------------->
ANAC81
<---------
WOX13(1)
<---------
ANAC58
--------->
GLK1(2)
aaagggaaaaaaagaaacgcaatggttaaaaaaaagatagattgattttagggaagagagagggtttgcttactcatac
atgagggaatctatttaagca
2394600
<---------
ANAC58
<---------
ANAC58
<------
NtERF2
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
--------->
ARR14(2)
------>
ICU4
<---------
DEAR3(1)
<----------
DOF2
-------
ATHB12
<---------
MYB52(1)
<---------
ANAC58
<---------
ANAC58
->
ANAC46
<-----------
HVH21
<---------
ANAC58
<---------
ANAC58
---
->
ANAC58
<---------
ANAC58
--------->
CCA1(2)
--------->
ARR11(3)
----------
->
ANAC58
<---------
ANAC58
---------->
DOF2
---------->
DOF2
--------->
ETT(1)
*
TSS
<---------
CCA1(2)
atgagtttagctttccgtcggggcttagcttgaagaaagagatggattgtcttaaagagagagcttgtcggaaacactctc
tctctccctatctttgtac
2394700
<-----------
HVH21
<-----------
TGA1
<---------
O2
===============================
bZIP_DOF
--------->
ANAC58
===============================
bZIP_DOF
--------->
ANAC55(1)
--------->
ANAC58
<---------
TGA1a
<----------
DOF2
--------->
ANAC46
==============================
bZIP_DOF
<---------
GLK1(2)
--------->
bZIP60(2)
--------->
ZAT2
--------->
TGA1a
<-----------
GT1
<---------
ZAT2
--------->
O2
<---------
DAG2
<----------
DOF2
------>
ANAC46
=================
bZIP_DOF
<----------
DOF2
<---------
DAG2
-------
----->
AtSPL8
<----------
DOF2
<---------
MYB46(3)
<-----------
GT1
<-----------
GT1
aaaccagcttctttgaggcatttcttttccacgtcacattaagttgttgactttttccgatttttcttctctttttgaattttgtttttctgtatgcagt
2394800
<-----------
GT1
<---------
ATHB12
<---------
YAB1
<---------
TOE2(3)
--------->
YAB1
<---------
CCA1(1)
<---------
RVE1(1)
--------->
ARR11(3)
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(1)
<---------
GLK1(2)
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ATHB12
<---------
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ANAC46
<---------
AHL20(2)
--------->
YAB1
<--------
--------->
TOE2(3)
--------->
AHL20(2)
--------->
ICU4
<---------
ALFIN1
<-----------
GT1
---->
GT1
<---------
ANAC58
<---------
AHL20(2)
----------->
RAV1(1)
------->
TEIL
----
caaatgttaatggatttttgggtgaatttaaaagattttttttaatgatttactattagcaacacttcataaataatttgaatgcatttttcaaat
cact
2394900
<---------
ARR11(3)
<---------
WOX13(1)
--------->
ATHB12
-------->
HAHB4
<---------
ICU4
-----
--------->
YAB1
<---------
MYB59
<---------
YAB1
--------->
ANAC58
=================================================================================
MADS_MADS
-
<---------
GLK1(2)
<---------
TOE2(3)
--------------->
AtSPL8
--------->
ARR11(3)
--------->
ICU4
<----------
DOF2
<-----
<---------
ARR11(3)
<---------
ATHB12
--------------->
AGL15
<-----
<---------
TOE2(3)
<---------
AHL20(2)
<----------
ID1
<-------
TEIL
<---------------
AtSPL8
----------->
ARR10
--------->
AHL20(2)
--------->
WOX13(1)
<------
ZmHOX2a(1)
--------->
ANAC58
-
ATHB12
--------------->
AGL15
--------->
ARR11(3)
--------->
YAB1
<---------------
AGL15
<-----
----->
YAB1
--------->
AHL20(2)
<-----------
GT1
<---------
ATHB12
----------------->
AGL3
<-----
aataagattttctcttaaaattaatgattaacttgagatttttcaatctaataagacaaatcatataggatacattcccttttaagtacccaattcgaag
2395000
--------->
AHL20(2)
<---------
AHL20(2)
<---------
TOE2(3)
------>
GT1
--------->
DOF2
<-
----
TOE1(2)
----------->
HVH21
<----
----
TOE2(2)
<---------
WOX13(1)
---------->
DOF2
<---------
ARR14(2)
----
TOE2(3)
--------->
ANAC58
<---------
TOE2(3)
<---------
GLK1(1)
----
TOE1(3)
--------->
ANAC58
<-----------
GT1
<----------
DOF2
gttaaagataaaaaattgtctcaagctatggatgggattgacacatataagcatataacgatgtacaaaaggagaagaaatatgagaattgcatttctga
2395100
<---------
MYB46(3)
--------->
ALFIN1
<---------
MYB46(3)
<---------
ANAC46
--------->
ALFIN1
<---------
AtMYB61
<---------
ANAC46
<---------
ANAC58
<------
MYB83
<------
MYB46(1)
<---------
ANAC58
<---------
ANAC46
<---------
MYB46(3)
<---------
At4g35610
<---------
AtMYB61
--------->
At4g35610
--------->
MYB46(2)
<-----------
RAV1(2)
<---------
MYB52(1)
<-----------
HVH21
<---------
ANAC46
>>>>>>>
GRF7
<---------
ANAC58
<------
ZmHOX2a(1)
<-----------
HVH21
<---------
ANAC58
<----------
ID1
-------
P
<---------
ARR11(3)
<-----------
GT1
<---------
ANAC46
-----
TOE2(3)
--------->
ARR11(3)
<---------
YAB1
--------->
MYB111(1)
------->
TEIL
-
ggtaagtgataagaagatgtcaggct
tcagatgactgaattctcattttgcctgtttggtgtggtgggagaaggacgaatttctcttgcaaatcgatgac
2395200
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AGI:
At3g07510.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81121.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16627.1)
Range:
from: 2393697
to: 2394681
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At3g07520.1
Description:
ATGLR1.4 (Arabidopsis thaliana glutamate receptor 1.4). Identical to Glutamate receptor 1.4 precursor (GLR1.4) [Arabidopsis Thaliana] (GB:Q8LGN1;GB:Q8LGN2;GB:Q9SRR4); similar to ATGLR1.3 (Arabidopsis thaliana glutamate receptor 1.3) [Arabidopsis thaliana] (TAIR:AT5G48410.1); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.2); similar to ATGLR1.2 (Arabidopsis thaliana glutamate receptor 1.2) [Arabidopsis thaliana] (TAIR:AT5G48400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43244.1); contains InterPro domain Extracellular ligand-binding receptor (InterPro:IPR001828); c
Range:
from: 2394897
to: 2398297
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.