Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------AtLEC2 --------->ZAT2                                     --------->HSFB2a(2) <---------At4g35610                                <---------HSFB2a(2) --------->At4g35610                       <---------ARR14(2)                                       - <---------ZAT2                            --------->ARR14(2)                          --------->YAB1 ----->NtERF2                         --------->GLK1(2)      --------->ANAC46   ------>NtERF2       < ---->ANAC58                     ---------->DOF2   <---------LBD16             --------->LBD16      < ---->ANAC58                --------->ANAC58      ----------->RAV1(2)        <---------LBD16       -- ---->ANAC46                --------->ANAC58   ------>ZmHOX2a(1)           -------->P  <-----------GT1 -MYB52(2)                  --------->ANAC46 ------>ZmHOX2a(2)     <----------DOF2<---------DAG2   <-   gccagcttccatggccatgttcttcaatataagccaaaagtttctgatcctcttctggagtccaaggccctttcttcaacccggccttatcacaacatgg  47900                            <---------YAB1                         <---------ARR11(3)              <-----------GT1 ------>ZmHOX2a(2)     --------->ANAC58 -------->At4g35610    --------->ANAC58                                          <-----------GT1 ------ZmHOX2a(2)  --------->ANAC46                                           --------->YAB1 ---------At4g35610--------->ANAC58                                    <---------LBD16 ------->ARR14(2)  --------->ANAC58               --------->DAG2      <---------ALFIN1  XXXXXXXXXXXXX --------ARR14(2)----------->RAV1(1)             ---------->DOF2     ------>ZmHOX2a(2)  <---------ZAT6   cgatctgcccattgttttcccacacaagttattagtctaatctactgaagaaaaagctagcttcaatctgatccacggtttaataacctagtgtatgaga  48000                           --------->YAB1                          <---------YAB1               --------->YAB1               <---------ICU4                       <------NtERF2              <---------YAB1                       <-----------HVH21             --------->ARR11(3)                    <-----------TGA1                     --------->ARR11(3)             <---------ARR11(3)                   --------->bZIP60(1)              ------->GAMYB         <---------ANAC55(2)                      <---------ANAC58              ----------->RAV1(1) <         --------->ANAC55(2)                      <---------ANAC58              --------->MYB52(1)  <   <---------YAB1<---------YAB1         --------->At4g35610                    --------->ANAC46     - XXXXXXX>MIR869.2--------->ICU4   ---------->DOF2 <---------bZIP60(1) ----------->GT1   <---------ARR11(3)   tagttgtcattacatgatcatgatcagtatgatcacaaaagctgctctcttggcgtcactctgatatatagatggagaaacacaacagaagatgtctctg  48100                        --------->LBD16                       <---------LBD16                                           <-----------RAV1(1)                      <---------LBD16                                          <----------DOF2             <---------ZAT18                                           <---------YAB1             --------->ZAT18                                           <---------AHL20(2)           <---------At4g35610                                         --------->ICU4           --------->At4g35610                                       <---------CCA1(1)      --------->HSFB2a(2)                                            <---------RVE1(1)      <---------HSFB2a(2)               <---------WOX13(1)          --------->ARR11(3) ---------TOE1(3) <---------DAG2       --------->ARR14(2)           <---------ARR11(3)              < ---------TOE2(3) <----------DOF2 <---------bZIP60(2)         --------->ETT(2)--------->TOE2(3)     - -------->MYB59  <---------DAG2----------->HVH21           <---------ANAC46<-----------GT1  <--------   tttaggttctgtaagcgccccttttcccggtctctgacatggattggcattcaattggatggggtcgagagatattattacctttgtggctccaacacct  48200                               <---------ATHB12                           --------->MYB46(3)                       --------->ZAT14                       <---------ZAT14                   --------------->AtSPL8                   ---     <----------DOF2   <---------ZAT18            --------->TOE1(3)                              ----    <---------------AGL15 --------->ANAC46        --------->TOE2(3)                             <----    --------------->AGL15 --------->ANAC58   <----------DOF2 ------->TEIL ---------->DOF2       ----- ---------GLK1(1)   ------->GAMYB<---------At5g28300     <---------------AtSPL8      --------->At5g28300 -------->GLK1(1)--------->MYB52(1) --------->ZAT14      <---------------AtSPL3     ----------->GT1<- -ALFIN1 ---------->DOF2  --------->ANAC58  <---------ICU4  <-----------GT1 ----------->GT1     <----   tgatttccttttaaagactcaacagagcacccaattactgtagccatctttaccttgaaattgtacctctcaacacaaaagtaaaacagtgaatttcaga  48300                           ------------>CBF   ----------->GT1       --------->WOX13(1)   *TSS    <---------AHL20(2) -------->RAV1(2)     <---------ARR11(3) ----->GLK1(2)    <---------WRKY38(1)                                  <------------CBF -----GLK1(2)     <---------WRKY12                  --------->AtLEC2 <---------YAB1 ---->ARR14(2)   --------->WRKY18(1)        --------->YAB1    <------ZmHOX2a(1)                   --- --------LBD16<---------TOE1(3)            <---------YAB1     --------->YAB1                      --- -----ARR14(2)<---------TOE2(3)          <----------DOF2    <---------TOE2(3)             <---------YAB1   acctggagtaaattttaaggtcaacatctatcaatagctctcactttgataaccctgcaacttaggataatgtcattgagaagaatgtttttctcattag  48400                                                                                        --------->ETT(2)                                                            --------->LBD16             <---------ETT(2)                                                           --------->LBD16         --------->At4g35610                                                     <---------ANAC58              <---------At4g35610                                                     <---------ANAC58             --------->MYB52(2)                      <-----------GT1              <-----------GT1               <-------TEIL         <----------DOF2               <-----------GT1<----------DOF2        <---------TOE1(3) ------>TOE2(3)    ------>ZmHOX2a(1) --------->AHL20(2)    --------->ANAC46  <---------TOE2(3) ------>TOE1(3)    <----------DOF2   <---------AHL20(2)   <---------LBD16<-----------HVH21          -   ccttaaacaaactttgtggtcctttaacagttttgacatttaaaccattcttgttactttcccgcatttttctcgcgtcaaggttcgctgtcgacagtcc  48500      --------->ANAC46               <-----------GT1               --------->ZAT6                ----   --------->ZAT18                  <-----------GT1          --------->ARR11(3)                  ====   <---------ZAT18        <-----------GT1                    <---------ARR11(3)    <---------GLK1(2)< --------->DOF2        ----------->GT1        --------->ZAT6--------->YAB1     ---------->DOF2   <---   ccaaatgcactaaacccatttaagctagttacaagttttaaacacttctcactaaaactcaattatcttacactagggtctaaaagatgctcaaggtttc  48600                       <---------MYB46(3)                                                 --------->TOE2(3)                 <---------ANAC58   <----------ID1                         <---------ANAC58        --------->ARR14(2)        --------->ANAC58                     <---------ANAC58   -----------        <---------ARR14(2)  <---------ANAC46                           <---------ANAC58   <----------       --------->GLK1(1)    <---------ANAC58<---------ARR11(3)    <---------At5g28300    ============       <---------GLK1(1)    <---------ANAC58--------->ARR11(3)   --------->MYB52(1)      ------------ ----------->AGL15    <---------AtMYB61 ---------->DOF2        <---------ANAC58        <-----------GT1 ==================================================================================================== ---------YAB1   <---------ANAC58 --------->ANAC58        ---------->ID1   <---------ANAC58 ------YAB1 ------>ZmHOX2a(1)   ---------->DOF2<---------YAB1  <---------ANAC58--------->REM1(1)    <   ttattacaggtatcctattgagtgatggtttcttgaaagctacaaagttcttattgttttgtcttacttacggtcttgcctacaactagttaccctaata  48700                                                              --------->HSFB2a(2)                                                              <---------HSFB2a(2)                                                        --------------->AGL15        <---------DAG2                                  <---------DAG2                            ---        <----------DOF2     --------->ATHB12            <----------DOF2                           <--  --------->ZAT6       <---------YAB1                  <-----------------AGL3                    <--- ---->AGL15        <-------MYC3                        ============================================== -----AGL15        ------->MYC3                    <---------MYB52(1)                           <---- =========================================================MADS_MADS                             <---- ----->AGL3 <---------TOE2(3)             ==============================MADS_MADS       <---------MYB52(1) =====MADS_MADS   <---------ANAC55(1)     --------------->AGL15                        <-------GAMYB -----------GT1   --------->ANAC55(2)    <-----------GT1<---------------AGL15--------->YAB1     <----   agttacactactttatggaaacgtgtttattgatttcttcgtttcacattttagttagctttttgtagaaactccacaatagtaaatgctgttagatggc  48800  Previous    Next  AGI:  At3g01140.1    Description:  MYB106 (myb domain protein 106); DNA binding / transcription factor. similar to AtMIXTA/AtMYB16 (myb domain protein 16), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G15310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15011.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 46403    to: 48303    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g01142.1    Description:  other RNA Range:  from: 46725    to: 48303    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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