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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AtLEC2
--------->
ZAT2
--------->
HSFB2a(2)
<---------
At4g35610
<---------
HSFB2a(2)
--------->
At4g35610
<---------
ARR14(2)
-
<---------
ZAT2
--------->
ARR14(2)
--------->
YAB1
----->
NtERF2
--------->
GLK1(2)
--------->
ANAC46
------>
NtERF2
<
---->
ANAC58
---------->
DOF2
<---------
LBD16
--------->
LBD16
<
---->
ANAC58
--------->
ANAC58
----------->
RAV1(2)
<---------
LBD16
--
---->
ANAC46
--------->
ANAC58
------>
ZmHOX2a(1)
-------->
P
<-----------
GT1
-
MYB52(2)
--------->
ANAC46
------>
ZmHOX2a(2)
<----------
DOF2
<---------
DAG2
<-
gccagcttccatggccatgttcttcaatataagccaaaagtttctgatcctcttctggagtccaaggccctttcttcaacccggccttatcacaacatgg
47900
<---------
YAB1
<---------
ARR11(3)
<-----------
GT1
------>
ZmHOX2a(2)
--------->
ANAC58
-------->
At4g35610
--------->
ANAC58
<-----------
GT1
------
ZmHOX2a(2)
--------->
ANAC46
--------->
YAB1
---------
At4g35610
--------->
ANAC58
<---------
LBD16
------->
ARR14(2)
--------->
ANAC58
--------->
DAG2
<---------
ALFIN1
XXXXXXXXXXXXX
--------
ARR14(2)
----------->
RAV1(1)
---------->
DOF2
------>
ZmHOX2a(2)
<---------
ZAT6
cgat
ctgcccattgttttcccacacaagttattagtctaatctactgaagaaaaagctagcttcaatctgatccacggtttaataacctagtgtatgaga
48000
--------->
YAB1
<---------
YAB1
--------->
YAB1
<---------
ICU4
<------
NtERF2
<---------
YAB1
<-----------
HVH21
--------->
ARR11(3)
<-----------
TGA1
--------->
ARR11(3)
<---------
ARR11(3)
--------->
bZIP60(1)
------->
GAMYB
<---------
ANAC55(2)
<---------
ANAC58
----------->
RAV1(1)
<
--------->
ANAC55(2)
<---------
ANAC58
--------->
MYB52(1)
<
<---------
YAB1
<---------
YAB1
--------->
At4g35610
--------->
ANAC46
-
XXXXXXX>
MIR869.2
--------->
ICU4
---------->
DOF2
<---------
bZIP60(1)
----------->
GT1
<---------
ARR11(3)
tagttgtcattac
atgatcatgatcagtatgatcacaaaagctgctctcttggcgtcactctgatatatagatggagaaacacaacagaagatgtctctg
48100
--------->
LBD16
<---------
LBD16
<-----------
RAV1(1)
<---------
LBD16
<----------
DOF2
<---------
ZAT18
<---------
YAB1
--------->
ZAT18
<---------
AHL20(2)
<---------
At4g35610
--------->
ICU4
--------->
At4g35610
<---------
CCA1(1)
--------->
HSFB2a(2)
<---------
RVE1(1)
<---------
HSFB2a(2)
<---------
WOX13(1)
--------->
ARR11(3)
---------
TOE1(3)
<---------
DAG2
--------->
ARR14(2)
<---------
ARR11(3)
<
---------
TOE2(3)
<----------
DOF2
<---------
bZIP60(2)
--------->
ETT(2)
--------->
TOE2(3)
-
-------->
MYB59
<---------
DAG2
----------->
HVH21
<---------
ANAC46
<-----------
GT1
<--------
tttaggttctgtaagcgccccttttcccggtctctgacatggattggcat
tcaattggatggggtcgagagatattattacctttgtggctccaacacct
48200
<---------
ATHB12
--------->
MYB46(3)
--------->
ZAT14
<---------
ZAT14
--------------->
AtSPL8
---
<----------
DOF2
<---------
ZAT18
--------->
TOE1(3)
----
<---------------
AGL15
--------->
ANAC46
--------->
TOE2(3)
<----
--------------->
AGL15
--------->
ANAC58
<----------
DOF2
------->
TEIL
---------->
DOF2
-----
---------
GLK1(1)
------->
GAMYB
<---------
At5g28300
<---------------
AtSPL8
--------->
At5g28300
-------->
GLK1(1)
--------->
MYB52(1)
--------->
ZAT14
<---------------
AtSPL3
----------->
GT1
<-
-
ALFIN1
---------->
DOF2
--------->
ANAC58
<---------
ICU4
<-----------
GT1
----------->
GT1
<----
tgatttccttttaaagactcaacagagcacccaattactgtagccatctttaccttgaaattgtacctctcaacacaaaagtaaaacagtgaatttcaga
48300
------------>
CBF
----------->
GT1
--------->
WOX13(1)
*
TSS
<---------
AHL20(2)
-------->
RAV1(2)
<---------
ARR11(3)
----->
GLK1(2)
<---------
WRKY38(1)
<------------
CBF
-----
GLK1(2)
<---------
WRKY12
--------->
AtLEC2
<---------
YAB1
---->
ARR14(2)
--------->
WRKY18(1)
--------->
YAB1
<------
ZmHOX2a(1)
---
--------
LBD16
<---------
TOE1(3)
<---------
YAB1
--------->
YAB1
---
-----
ARR14(2)
<---------
TOE2(3)
<----------
DOF2
<---------
TOE2(3)
<---------
YAB1
acc
tggagtaaattttaaggtcaacatctatcaatagctctcactttgataaccctgcaacttaggataatgtcattgagaagaatgtttttctcattag
48400
--------->
ETT(2)
--------->
LBD16
<---------
ETT(2)
--------->
LBD16
--------->
At4g35610
<---------
ANAC58
<---------
At4g35610
<---------
ANAC58
--------->
MYB52(2)
<-----------
GT1
<-----------
GT1
<-------
TEIL
<----------
DOF2
<-----------
GT1
<----------
DOF2
<---------
TOE1(3)
------>
TOE2(3)
------>
ZmHOX2a(1)
--------->
AHL20(2)
--------->
ANAC46
<---------
TOE2(3)
------>
TOE1(3)
<----------
DOF2
<---------
AHL20(2)
<---------
LBD16
<-----------
HVH21
-
ccttaaacaaactttgtggtcctttaacagttttgacatttaaaccattcttgttactttcccgcatttttctcgcgtcaaggttcgctgtcgacagtcc
48500
--------->
ANAC46
<-----------
GT1
--------->
ZAT6
----
--------->
ZAT18
<-----------
GT1
--------->
ARR11(3)
====
<---------
ZAT18
<-----------
GT1
<---------
ARR11(3)
<---------
GLK1(2)
<
--------->
DOF2
----------->
GT1
--------->
ZAT6
--------->
YAB1
---------->
DOF2
<---
ccaaatgcactaaacccatttaagctagttacaagttttaaacacttctcactaaaactcaattatcttacactagggtctaaaagatgctcaaggtttc
48600
<---------
MYB46(3)
--------->
TOE2(3)
<---------
ANAC58
<----------
ID1
<---------
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<---------
ANAC58
-----------
<---------
ARR14(2)
<---------
ANAC46
<---------
ANAC58
<----------
--------->
GLK1(1)
<---------
ANAC58
<---------
ARR11(3)
<---------
At5g28300
============
<---------
GLK1(1)
<---------
ANAC58
--------->
ARR11(3)
--------->
MYB52(1)
------------
----------->
AGL15
<---------
AtMYB61
---------->
DOF2
<---------
ANAC58
<-----------
GT1
====================================================================================================
---------
YAB1
<---------
ANAC58
--------->
ANAC58
---------->
ID1
<---------
ANAC58
------
YAB1
------>
ZmHOX2a(1)
---------->
DOF2
<---------
YAB1
<---------
ANAC58
--------->
REM1(1)
<
ttattacaggtatcctattgagtgatggtttcttgaaagctacaaagttcttattgttttgtcttacttacggtcttgcctacaactagttaccctaata
48700
--------->
HSFB2a(2)
<---------
HSFB2a(2)
--------------->
AGL15
<---------
DAG2
<---------
DAG2
---
<----------
DOF2
--------->
ATHB12
<----------
DOF2
<--
--------->
ZAT6
<---------
YAB1
<-----------------
AGL3
<---
---->
AGL15
<-------
MYC3
==============================================
-----
AGL15
------->
MYC3
<---------
MYB52(1)
<----
=========================================================
MADS_MADS
<----
----->
AGL3
<---------
TOE2(3)
==============================
MADS_MADS
<---------
MYB52(1)
=====
MADS_MADS
<---------
ANAC55(1)
--------------->
AGL15
<-------
GAMYB
-----------
GT1
--------->
ANAC55(2)
<-----------
GT1
<---------------
AGL15
--------->
YAB1
<----
agttacactactttatggaaacgtgtttattgatttcttcgtttcacattttagttagctttttgtagaaactccacaatagtaaatgctgttagatggc
48800
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AGI:
At3g01140.1
Description:
MYB106 (myb domain protein 106); DNA binding / transcription factor. similar to AtMIXTA/AtMYB16 (myb domain protein 16), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G15310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15011.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 46403
to: 48303
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At3g01142.1
Description:
other RNA
Range:
from: 46725
to: 48303
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.