Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                <---------YAB1                <------                                                    <---------ANAC58                          -------  <---------ARR14(2)                                <---------ANAC58                          ------- >ZmHOX2a(2)                                     <---------TOE2(3)  ------>ZmHOX2a(2)         ------- ->ARR11(3)             ----------->GT1          <---------TOE1(3)<---------ARR11(3)          <------ --AGP1             <---------ARR11(3)     <---------YAB1     --------->YAB1      ----------->GT1  <- ->AGP1             --------->ARR11(3)  <---------ATHB12<---------ANAC58------->MYC3  <---------AHL20(2) --ARR11(3)     ---------->DOF2         --------->ICU4  <---------ANAC58<-------MYC3  --------->AHL20(2)   agcaaatttgagaaacttaaaagatgttgtcaaatgtgagaaatgatgcttaaggcttacgttctcatgatccatatgcctgagaagtttaatttcacgt  18954500                                                                                    --------->ZAT2                                                                                    <---------ZAT2                                                                                    --------->ZAT14                                                                                    <---------ZAT14                                                                                 --------->LBD16                                         ------>ZmHOX2a(2)                      --------->DEAR3(1) --------ANAC58                         <------ZmHOX2a(2)                       --------->ANAC46 ---ANAC55(2)                          <---------ARR14(2)                      --------->ANAC46 -->ANAC46                             <---------ARR11(3)                   --------->ZAT14 -->ANAC55(2)                  <---------ICU4           <----------DOF2     --------->ZAT18 -->O2                     ---------->DOF2              <---------DAG2      <---------ZAT14 ---O2                   --------->YAB1--------->ARR11(3)         <-----------HVH21----------->RAV1(1) --------ANAC58         <---------YAB1 --------->ARR14(2)      --------->ZAT14<---------At5g28300   -   agcgttctcttagcatcgatgatgttatcaaaagcattaccgatcttcttaatagccactttctctccagtcactgagttcaccgcagcactgaaattca  18954600                                            --------->AHL20(2)         -------->P                                            <---------AHL20(2)         --------->MYB52(1)                                         <---------ICU4           <---------ARR11(3)                                      --------->YAB1              --------->ARR11(3)     ------->GAMYB                                   <----------DOF2            ---------->DOF2          --------->ANAC58                                --------->ANAC58            --------->YAB1             --------->ANAC58 -------->GLK1(2)               --------->ANAC58     ---------->DOF2  <-----------GT1  <---------ATERF1(1)   agaatcaagagcctgtgaacattcaatagaaggaacgctttcataatttatcagacaaagaatcaaaagaacttaccagacaataccgcaagcgcctcta  18954700                                                                                      --------->ETT(1)                                                                                      ---------------                                                                                      <---------At1g77200                                                                                      ---------------                                                                                   --------->ALFIN1                                                                                 --------->ALFIN1                                                                              <------NtERF2                                                                             ------>NtERF2                                                                            <---------ALFIN1                                      ---------->DOF2                      <---------ABI4(2)                                 <---------HSFC1(2)                        --------->ATERF1(1)                            --------->HSFC1(1)                             --------->MYB46(3)                            <---------HSFC1(1)                            <---------ATERF1(1)                            --------->HSFB2a(2)                           ------>NtERF2<---------DEAR3(2)                            <---------HSFB2a(2)                          --------->RAP2.6(2)                           <---------LBD16                              <---------RAP2.6(2)             <------ZmHOX2a(1)   --------->HSFC1(2)                   --------->MYB52(1)   <----------ID1       <----------DOF2               <---------TOE2(3)--------->RAP2.6(3)     <-----   ccaatgggacgaataggagggacatactttctggaaacttcaaagagttgtccataaacgttgtactgaacatagcggccaccgtgtgtcggtacaactt  18954800          <---------ANAC46          <------MYB83                             --------->YAB1     <---------HSFB2a(1)                          --------->ICU4 >AtSPL8 --------->MYB59                  <---------YAB1 >AtSPL3 --------->MYB46(2)            --------->ICU4                                           *TSS -----DOF2<------MYB46(1)  <---------GLK1(2)      <---------ATHB12                      <----------DOF2   tgatgcaatgttcggtagaaccagagcttgattctccagacatgatgatgcaatgatcagaccgagaacgagagaaaccaagaagaagggcttttgttga  18954900                  <---------ARR11(3)                  --------->ARR11(3)             ---------->DOF2            ------>ZmHOX2a(1)                                                       ----------->HVH21        ------>ZmHOX2a(2)                                                   ------>ZmHOX2a(2)       <------ZmHOX2a(2)                                                   <------ZmHOX2a(2)       <---------GLK1(1)                                                   --------->GLK1(1)       --------->GLK1(1)                                                   <---------GLK1(1)      --------->ARR14(2)                                                  --------->ARR11(3)      ---      --------->ARR14(3)                                                  <---------ARR11(3)  -------      <---------ARR11(3)                                                  <---------AGP1     <-------      --------->ARR11(3)                                           --------->At5g28300   ----------->GT1      <---------ARR14(2)                                <----------DOF2  --------->RVE1(1)--------->LBD16     <------ZmHOX2a(1)                               --------->GLK1(2)---------->DOF2    <---------ANAC55(2)   agttgaaggatctcctaaagtatctcttgaagacactaaatccatgtgaagagagaagcttttttcaactgtaaaagatctctcaagggacccgtgaatc  18955000                    <---------ANAC58                    <---------ANAC58                                                            -----        ---------->DOF2    ----------->GT1                                                   --------   <------ZmHOX2a(2)<---------ANAC55(1)                                                      <-------  --------->ARR11(3)--------->ANAC55(2)                                                  <---------ICU4  <---------ARR11(3)<---------ANAC55(2)                                              <---------------AGL15 ------->DOF2      <-------TEIL            <-----------HVH21                         --------------->AGL15 >TEIL<---------YAB1<---------ANAC46  --------->At4g35610      <---------ICU4     <-----------GT1 --CCA1(2)       --------->TOE2(2) ---------->DOF2       --------->At4g35610   <---------MYB46(3)   taaagatcatgaaagattacatacgtgtatggtaacaagaagcagagtcactcgatattagctcaatattgcatttttcatttgttactactaattgcac  18955100                                                                         <---------ZAT14                                  <---------WOX13(1)                     --------->ZAT14--------->ANAC58                                --------->ATHB12                  ---------->DOF2       --------->ANAC46 ---->ANAC46                   <---------YAB1               --------->ZAT6 ----------->GT1   -------- ->ZAT18  ---------->DOF2    <----------DOF2               <------ZmHOX2a(2)        <-----------GT1 --ZAT18<------ZmHOX2a(2)---------->ID1             --------->ATHB12     --------->ZAT18--------->ANAC58   ttaactatagatcaaagcctctgatttgttcctttgattgaaacaggtttagaaagattggatcactacaaagagagcagtgattttttcaagccaaaca  18955200                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                     --------->MYB52(1)                                                                  --------->AtMYB61                  --------->AHL20(1)                          ------->GAMYB                  <---------AHL20(2)                         <---------ALFIN1         --------->ETT(2)                  <---------AHL20(1)                        ------>MYB46(1)       --------->ANAC58                  --------->AHL20(2)                        ------>MYB83          --------->ANAC58            <---------AHL20(2)            <-----------HVH21----------->RAV1(1)--------->CCA1(2) ->MYB52(1) --------->AHL20(2) --------->ATHB12           --------->AtMYB61  <----------ID1--------->At4g35610   gatgtattctatatttatattttattgcagaattgatttcatacagtcacacatacaagaccaacacacctaaacggaagagacaagctcgacagatgga  18955300                                             ------>NtERF2                                          <---------At4g35610                                          --------->At4g35610                                       ---------->DOF2                               --------->HSFB2a(2)                               <---------HSFB2a(2)                         <---------------AGL15                         --------------->AGL15                        ----------------->AGL3  <----------DOF2            ---------->DOF2  <---------AHL20(2)<---------DAG2                <---------MYB59       ----------->GT1  <-----------------AGL3 <----------DOF2              --------->ANAC46   <-----     ---------->DOF2  --------->ZAT6 --------->TOE2(3)   ----------->GT1  <-----------GT1     -------   ctcaaaacaaagaaaaaagagaaaacactatttatagaacctaaagctgccttttgtaagggttaaacttgtttgtttacctcactattttagtctacat  18955400  Previous    Next  AGI:  At2g46070.1    Description:  ATMPK12 (Arabidopsis thaliana MAP kinase 12); MAP kinase/ kinase. Identical to Mitogen-activated protein kinase 12 (MPK12) [Arabidopsis Thaliana] (GB:Q8GYQ5;GB:O82361); similar to ATMPK4 (MAP KINASE 4), MAP kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G01370.1); similar to double HA-tagged mitogen activated protein kinase 12 [synthetic construct] (GB:ABG54339.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain JNK MAP kinase; (InterPro:IPR008351) Range:  from: 18953054    to: 18954896    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g46080.1    Description:  similar to BPS1 (BYPASS 1) [Arabidopsis thaliana] (TAIR:AT1G01550.2); similar to BPS1 (BYPASS 1) [Arabidopsis thaliana] (TAIR:AT1G01550.1); similar to unknown [Populus trichocarpa] (GB:ABK94247.1) Range:  from: 18955190    to: 18957178    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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