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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-
<---------
YAB1
<------
<---------
ANAC58
-------
<---------
ARR14(2)
<---------
ANAC58
-------
>
ZmHOX2a(2)
<---------
TOE2(3)
------>
ZmHOX2a(2)
-------
->
ARR11(3)
----------->
GT1
<---------
TOE1(3)
<---------
ARR11(3)
<------
--
AGP1
<---------
ARR11(3)
<---------
YAB1
--------->
YAB1
----------->
GT1
<-
->
AGP1
--------->
ARR11(3)
<---------
ATHB12
<---------
ANAC58
------->
MYC3
<---------
AHL20(2)
--
ARR11(3)
---------->
DOF2
--------->
ICU4
<---------
ANAC58
<-------
MYC3
--------->
AHL20(2)
agcaaatttgagaaacttaaaagatgttgtcaaatgtgagaaatgatgcttaaggcttac
gttctcatgatccatatgcctgagaagtttaatttcacgt
18954500
--------->
ZAT2
<---------
ZAT2
--------->
ZAT14
<---------
ZAT14
--------->
LBD16
------>
ZmHOX2a(2)
--------->
DEAR3(1)
--------
ANAC58
<------
ZmHOX2a(2)
--------->
ANAC46
---
ANAC55(2)
<---------
ARR14(2)
--------->
ANAC46
-->
ANAC46
<---------
ARR11(3)
--------->
ZAT14
-->
ANAC55(2)
<---------
ICU4
<----------
DOF2
--------->
ZAT18
-->
O2
---------->
DOF2
<---------
DAG2
<---------
ZAT14
---
O2
--------->
YAB1
--------->
ARR11(3)
<-----------
HVH21
----------->
RAV1(1)
--------
ANAC58
<---------
YAB1
--------->
ARR14(2)
--------->
ZAT14
<---------
At5g28300
-
agcgttctcttagcatcgatgatgttatcaaaagcattaccgatcttcttaatagccactttctctccagtcactgagttcaccgcagca
ctgaaattca
18954600
--------->
AHL20(2)
-------->
P
<---------
AHL20(2)
--------->
MYB52(1)
<---------
ICU4
<---------
ARR11(3)
--------->
YAB1
--------->
ARR11(3)
------->
GAMYB
<----------
DOF2
---------->
DOF2
--------->
ANAC58
--------->
ANAC58
--------->
YAB1
--------->
ANAC58
-------->
GLK1(2)
--------->
ANAC58
---------->
DOF2
<-----------
GT1
<---------
ATERF1(1)
agaatcaagagcctgtgaacattcaatagaaggaacgctttcataatttatcagacaaagaatcaaaagaacttac
cagacaataccgcaagcgcctcta
18954700
--------->
ETT(1)
---------------
<---------
At1g77200
---------------
--------->
ALFIN1
--------->
ALFIN1
<------
NtERF2
------>
NtERF2
<---------
ALFIN1
---------->
DOF2
<---------
ABI4(2)
<---------
HSFC1(2)
--------->
ATERF1(1)
--------->
HSFC1(1)
--------->
MYB46(3)
<---------
HSFC1(1)
<---------
ATERF1(1)
--------->
HSFB2a(2)
------>
NtERF2
<---------
DEAR3(2)
<---------
HSFB2a(2)
--------->
RAP2.6(2)
<---------
LBD16
<---------
RAP2.6(2)
<------
ZmHOX2a(1)
--------->
HSFC1(2)
--------->
MYB52(1)
<----------
ID1
<----------
DOF2
<---------
TOE2(3)
--------->
RAP2.6(3)
<-----
ccaatgggacgaataggagggacatactttctggaaacttcaaagagttgtccataaacgttgtactgaacatagcggccaccgtgtgtcggtacaactt
18954800
<---------
ANAC46
<------
MYB83
--------->
YAB1
<---------
HSFB2a(1)
--------->
ICU4
>
AtSPL8
--------->
MYB59
<---------
YAB1
>
AtSPL3
--------->
MYB46(2)
--------->
ICU4
*
TSS
-----
DOF2
<------
MYB46(1)
<---------
GLK1(2)
<---------
ATHB12
<----------
DOF2
tgatgcaatgttcggtagaaccagagcttgattctccagacat
gatgatgcaatgatcagaccgagaacgagagaaaccaagaagaagggcttttg
ttga
18954900
<---------
ARR11(3)
--------->
ARR11(3)
---------->
DOF2
------>
ZmHOX2a(1)
----------->
HVH21
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
GLK1(1)
--------->
GLK1(1)
--------->
GLK1(1)
<---------
GLK1(1)
--------->
ARR14(2)
--------->
ARR11(3)
---
--------->
ARR14(3)
<---------
ARR11(3)
-------
<---------
ARR11(3)
<---------
AGP1
<-------
--------->
ARR11(3)
--------->
At5g28300
----------->
GT1
<---------
ARR14(2)
<----------
DOF2
--------->
RVE1(1)
--------->
LBD16
<------
ZmHOX2a(1)
--------->
GLK1(2)
---------->
DOF2
<---------
ANAC55(2)
agttgaaggatctcctaaagtatctcttgaagacactaaatccatgtgaagagagaagcttttttcaactgtaaaagatctctcaagggacccgtgaatc
18955000
<---------
ANAC58
<---------
ANAC58
-----
---------->
DOF2
----------->
GT1
--------
<------
ZmHOX2a(2)
<---------
ANAC55(1)
<-------
--------->
ARR11(3)
--------->
ANAC55(2)
<---------
ICU4
<---------
ARR11(3)
<---------
ANAC55(2)
<---------------
AGL15
------->
DOF2
<-------
TEIL
<-----------
HVH21
--------------->
AGL15
>
TEIL
<---------
YAB1
<---------
ANAC46
--------->
At4g35610
<---------
ICU4
<-----------
GT1
--
CCA1(2)
--------->
TOE2(2)
---------->
DOF2
--------->
At4g35610
<---------
MYB46(3)
taaagatcatgaaagattacatacgtgtatggtaacaagaagcagagtcactcgatattagctcaatattgcatttttcatttgttactactaattgcac
18955100
<---------
ZAT14
<---------
WOX13(1)
--------->
ZAT14
--------->
ANAC58
--------->
ATHB12
---------->
DOF2
--------->
ANAC46
---->
ANAC46
<---------
YAB1
--------->
ZAT6
----------->
GT1
--------
->
ZAT18
---------->
DOF2
<----------
DOF2
<------
ZmHOX2a(2)
<-----------
GT1
--
ZAT18
<------
ZmHOX2a(2)
---------->
ID1
--------->
ATHB12
--------->
ZAT18
--------->
ANAC58
ttaactatagatcaaagcctctgatttgttcctttgattgaaacaggtttagaaagattggatcactacaaagagagcagtgatttttt
caagccaaaca
18955200
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
MYB52(1)
--------->
AtMYB61
--------->
AHL20(1)
------->
GAMYB
<---------
AHL20(2)
<---------
ALFIN1
--------->
ETT(2)
<---------
AHL20(1)
------>
MYB46(1)
--------->
ANAC58
--------->
AHL20(2)
------>
MYB83
--------->
ANAC58
<---------
AHL20(2)
<-----------
HVH21
----------->
RAV1(1)
--------->
CCA1(2)
->
MYB52(1)
--------->
AHL20(2)
--------->
ATHB12
--------->
AtMYB61
<----------
ID1
--------->
At4g35610
gatgtattctatatttatattttattgcagaattgatttcatacagtcacacatacaagaccaacacacctaaacggaagagacaagctcgacagatgga
18955300
------>
NtERF2
<---------
At4g35610
--------->
At4g35610
---------->
DOF2
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------------
AGL15
--------------->
AGL15
----------------->
AGL3
<----------
DOF2
---------->
DOF2
<---------
AHL20(2)
<---------
DAG2
<---------
MYB59
----------->
GT1
<-----------------
AGL3
<----------
DOF2
--------->
ANAC46
<-----
---------->
DOF2
--------->
ZAT6
--------->
TOE2(3)
----------->
GT1
<-----------
GT1
-------
ctcaaaacaaagaaaaaagagaaaacactatttatagaacctaaagctgccttttgtaagggttaaacttgtttgtttacctcactatt
ttagtctacat
18955400
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AGI:
At2g46070.1
Description:
ATMPK12 (Arabidopsis thaliana MAP kinase 12); MAP kinase/ kinase. Identical to Mitogen-activated protein kinase 12 (MPK12) [Arabidopsis Thaliana] (GB:Q8GYQ5;GB:O82361); similar to ATMPK4 (MAP KINASE 4), MAP kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G01370.1); similar to double HA-tagged mitogen activated protein kinase 12 [synthetic construct] (GB:ABG54339.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain JNK MAP kinase; (InterPro:IPR008351)
Range:
from: 18953054
to: 18954896
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At2g46080.1
Description:
similar to BPS1 (BYPASS 1) [Arabidopsis thaliana] (TAIR:AT1G01550.2); similar to BPS1 (BYPASS 1) [Arabidopsis thaliana] (TAIR:AT1G01550.1); similar to unknown [Populus trichocarpa] (GB:ABK94247.1)
Range:
from: 18955190
to: 18957178
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.