Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <-----------GT1                                                         <---------ALFIN1                                                      --------->AtMYB61                                                      ------->GAMYB --------->GT1        ------->TEIL                    --------->ANAC46   <---------At4g35610 --->ARR11(3)--------->AtLEC2  <-----------GT1       --------->MYB46(3)  --------->At4g35610        < -GT1        <---------ANAC55(2)                   <-----------GT1<---------YAB1          <----------DOF2   cttgtaaaattagtcatgtaaatgtaactgaatttacaaaatttgatttgatataaccaccacttattttcattttgctgaaacatttggacctttgcat  18435900                                                                 <---------AHL20(2)                                                                <---------AHL20(1)                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                            <---------YAB1                                                           --------->AHL20(1)         <---------------------WRI1                        <---------AHL20(1)        <------MYB46(1)                                    --------->AHL20(2)        <------MYB83                                       <---------AHL20(2)        ----------->GT1                                   --------->YAB1                   <---------GLK1(2)      <---------WOX13(1)         <---------------AtSPL8  <---------ATHB51                  --------->ARR11(3)    --------->ATHB12         <---------YAB1        <-----------GT1             ----------->GT1   --------->ICU4   ---------->DOF2       <----------DOF2<---------ATHB12  ---------->DOF2 <---------ARR11(3) ---------AtLEC2<----------ID1   --------------->AtSPL8--------->WOX13(1)--------->YAB1---------->DOF2   ttgcattgattggtgaaaaaaacaaagcactataatttgtacaactttcatttctaccaattataattttttttatcaaaagcgttactaaaagattttt  18436000                  <---------AHL20(2)              <-----------GT1            ---------->DOF2            <-----------GT1    <------------MYB.PH3(1)         ---------->DOF2     --------->MYB59 <-     <----------DOF2         <-----------GT1   <---------AHL20(2)    --------->MYB52(1)   <---------At4g35610     <---------DAG2   --------->AHL20(2)      --------->AHL20(2) ----------->GT1   <---------------AtSPL3   <---------At4g35610<---------AHL20(2)      <---------AHL20(2)--------->DAG2     <---------------AtSPL8   ctctcagcttttttatacattttttttaatataactgttttttagtaattttatactatttcaaaaaaagttaacagataaaagttatgtacagctatgt  18436100                                                                                              <------                                                                                              -------                                                                                          --------->AHL20(2)                                                                                --------->MYB52(1)                                                                   --------->ANAC58       <---------AHL20(2)      --------->YAB1                                     --------->AHL20(2)    --------->MYB55(1)   --------->WOX13(1)                                  --------------->AGL15  --------->MYB46(3)  --------------->AGL15                  --------->GLK1(2)         --------->ANAC58    --------->AHL20(2)  <---------------AGL15                  <---------ARR11(3)      ---------->DOF2------>MYB46(1) ----------------->AGL3  ----------->GT1 --------->ARR11(3)     <------ZmHOX2a(1)--------->ANAC46 ======================================================================MADS_MADS------>MYB83 <------- ----------GT1      ---------->DOF2----------->GT1     <---------------AGL15  <---------MYB55(2)<----   gttaccaattagagtttttttggaaagaagtaaaatatggcaaaatctatctaaattcaaaaaataggaaagaaatcaaacccaccgaataaaaaattat  18436200                                                       <---------ATHB12                                 <---------TOE2(3)    --------->ANAC58                                ---------->DOF2       --------->ANAC58     <---------ANAC58          <---------AHL20(2)   --------->ZAT6     <---------ANAC58  --------->At4g35610  <---------DAG2 ---AHL20(2)           <---------ZAT2--------->WRKY38(1) -->AHL20(2)           <---------At4g35610  <----------DOF2 --AHL20(2)       ----------->HVH21  --------->WRKY12 --------->ANAC46 -----YAB1  ---------->ID1     --------->AHL20(2)<-----------GT1    <---------YAB1              -----   ttttaaggcgttttggctctctgacagctcaaattaaagttgactccttttttaccactcaagtctcattctcattcttcacttgaaccagaataaaacc  18436300                                                     <---------ZAT2                                                     --------->At4g35610                         ----                                                     --------->ZAT2                  ----------->RAV1(1)                                                 <-----------HVH21                 --------->At4g35610                    --------->ANAC58      --------->WOX13(1)         --------->REM1(1)       --------                    ----------->GT1--------->HSFB2a(1)             ----------->RAV1(1)   --------->At4g35610                    --------->ANAC58   *TSS <---------ATHB12     <------NtERF2    --------->ANAC46 ---------->DOF2  <--------P       <---------HSFB2a(1) <----------DOF2--------->TOE2(3)--------->MYB46(3) ------>RAV1(1) ----------->GT1   <---------KAN4(2)  <---------At4g35610        --------->At4g35610   acagaaagagagagaacagggtaagtaaaatcagagaattttctcaatcaatgtcagcttcaatggctgcaacatcaacatcatcagcaacagctacaac  18436400                                                                        <-------MYC3                                                                        <-------MYC2                                                                        ------->MYC3                                --------->ALFIN1                        ------->MYC2                              --------->ALFIN1                       <---------ALFIN1                            <---------ZAT2                         ----------->RAV1(1)                            --------->At4g35610                 --------->ANAC46       --------->ALFIN1     <---------At4g35610                 --------->ANAC58    --------->DAG2      --------->ALFIN1                        --------->ANAC58   ---------->DOF2  <------NtERF2                           --------->REM1(1)          --------->AHL20(2) ----->TOE2(3) <-----------RAV1(1)                        ------>ZmHOX2a(1)            <---------AHL20(2) ->REM1(1)<-----------HVH21 --------->ZAT2   ---------->ID1 --------->ANAC46  <---------ALFIN1 <-----   gtttataaagtgtgtcactgttggcgatggagctgtgggcaaaacttgtcttcttatttcctacaccagcaacacgttccccactgtatataaatccatc  18436500                                                              <-----------GT1                                                          <---------YAB1                                                        ----------->GT1                                                      ------>ZmHOX2a(2)                                                      ====================HOX2a_HOX2a                                                     <------ZmHOX2a(2)                                                     =====================HOX2a_HOX2a                                                    <---------ARR14(3)                                                    --------->ARR11(3)                          <---------ANAC58          --------->ARR14(3)                      <----------DOF2               <---------ARR11(3)                      <---------DAG2                --------->ARR14(2)                     <---------ANAC58               <---------ARR14(2)                     <---------ANAC58               --------->AGP1           <----------DOF2<---------ANAC58    <-------GAMYB  <---------YAB1        <---------ZAT6 xxxxxxxxxxxxxxxx>smallRNA(i)      <----------DOF2----------->ARR10           ----------->RAV1(1)   - ----CCA1(2)      <---------WOX13(1)         <---------MYB46(3)    <------ZmHOX2a(1)  <--------------   tctccctctctctcttttggattgcttttcttgatagcttttggtgactgttgagatcttgttattacaggattatgttccaacagtgttcgacaatttc  18436600                                                                             ---------->DOF2                                                    <---------ANAC46   ------>MYB46(1)                                              <---------ARR14(2)     <---------MYB59                                              --------->ARR14(2)    --------->ANAC55(2)           <--    <---------TOE2(3)         --------->WOX13(1)   <---------At4g35610 ------>MYB83         <-------- -------->YAB1     --------->At5g28300   <---------LBD16          <-----------GT1     <---------ANAC58 -------WRI1      ----------->GT1     <---------GLK1(1)        <----------DOF2        <---------ANAC58   aatgctaatgttttagtcgatggtaaaactgtcaatctgggtctctgggatactgctggtaaatgcttttacctaatgtcaaagttgttcttgtctttag  18436700                                        ------>ZmHOX2a(1)         ----------->RAV1(1)            --------------->AGL15   <---------ARR11(3)                   <---------------AGL15           <----------DOF2   --------->ARR11(3)                   <----------DOF2--------->At4g35610  <---------CCA1(2)                  ---------->ID1    <-------GAMYB ------->TEIL --------DOF2          <---------ARR11(3)    ---------->DOF2        <---------CCA1(2) --DOF2 --------->REM1(1)      <----------DOF2         <---------At4g35610      ----------->RAV1(1)   ctttatatctacaacaatatgtcaaggtctaatcttttggtccttttaaaagaagtcagttgaaaaatttgaatctttgatgcaacattgttttggttct  18436800  Previous    Next  AGI:  At2g44690.1    Description:  ARAC9/AtROP8/ROP8 (rho-related protein from plants 8); GTP binding. Identical to Rac-like GTP-binding protein ARAC9 precursor (ARAC9) [Arabidopsis Thaliana] (GB:Q9XGU0;GB:O80508); similar to ARAC3/ATROP6/RHO1PS/ROP6 (rho-related protein from plants 6), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT4G35020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70494.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); cont Range:  from: 18436339    to: 18437879    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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