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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
GT1
<---------
ALFIN1
--------->
AtMYB61
------->
GAMYB
--------->
GT1
------->
TEIL
--------->
ANAC46
<---------
At4g35610
--->
ARR11(3)
--------->
AtLEC2
<-----------
GT1
--------->
MYB46(3)
--------->
At4g35610
<
-
GT1
<---------
ANAC55(2)
<-----------
GT1
<---------
YAB1
<----------
DOF2
cttgtaaaattagtcatgtaaatgtaactgaatttacaaaatttgatttgatataaccaccacttattttcattttgctgaaacatttggacctttgcat
18435900
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(1)
<---------------------
WRI1
<---------
AHL20(1)
<------
MYB46(1)
--------->
AHL20(2)
<------
MYB83
<---------
AHL20(2)
----------->
GT1
--------->
YAB1
<---------
GLK1(2)
<---------
WOX13(1)
<---------------
AtSPL8
<---------
ATHB51
--------->
ARR11(3)
--------->
ATHB12
<---------
YAB1
<-----------
GT1
----------->
GT1
--------->
ICU4
---------->
DOF2
<----------
DOF2
<---------
ATHB12
---------->
DOF2
<---------
ARR11(3)
---------
AtLEC2
<----------
ID1
--------------->
AtSPL8
--------->
WOX13(1)
--------->
YAB1
---------->
DOF2
ttgcattgattggtgaaaaaaacaaagcactataatttgtacaactttcatttctaccaattataattttttttatcaaaagcgttactaaaagattttt
18436000
<---------
AHL20(2)
<-----------
GT1
---------->
DOF2
<-----------
GT1
<------------
MYB.PH3(1)
---------->
DOF2
--------->
MYB59
<-
<----------
DOF2
<-----------
GT1
<---------
AHL20(2)
--------->
MYB52(1)
<---------
At4g35610
<---------
DAG2
--------->
AHL20(2)
--------->
AHL20(2)
----------->
GT1
<---------------
AtSPL3
<---------
At4g35610
<---------
AHL20(2)
<---------
AHL20(2)
--------->
DAG2
<---------------
AtSPL8
ctctcagcttttttatacattttttttaatataactgttttttagtaattttatactatttcaaaaaaagttaacagataaaagttatgtacagctatgt
18436100
<------
-------
--------->
AHL20(2)
--------->
MYB52(1)
--------->
ANAC58
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
MYB55(1)
--------->
WOX13(1)
--------------->
AGL15
--------->
MYB46(3)
--------------->
AGL15
--------->
GLK1(2)
--------->
ANAC58
--------->
AHL20(2)
<---------------
AGL15
<---------
ARR11(3)
---------->
DOF2
------>
MYB46(1)
----------------->
AGL3
----------->
GT1
--------->
ARR11(3)
<------
ZmHOX2a(1)
--------->
ANAC46
======================================================================
MADS_MADS
------>
MYB83
<-------
----------
GT1
---------->
DOF2
----------->
GT1
<---------------
AGL15
<---------
MYB55(2)
<----
gttaccaattagagtttttttggaaagaagtaaaatatggcaaaatctatctaaattcaaaaaataggaaagaaatcaaacccaccgaataaaaaattat
18436200
<---------
ATHB12
<---------
TOE2(3)
--------->
ANAC58
---------->
DOF2
--------->
ANAC58
<---------
ANAC58
<---------
AHL20(2)
--------->
ZAT6
<---------
ANAC58
--------->
At4g35610
<---------
DAG2
---
AHL20(2)
<---------
ZAT2
--------->
WRKY38(1)
-->
AHL20(2)
<---------
At4g35610
<----------
DOF2
--
AHL20(2)
----------->
HVH21
--------->
WRKY12
--------->
ANAC46
-----
YAB1
---------->
ID1
--------->
AHL20(2)
<-----------
GT1
<---------
YAB1
-----
ttttaaggcgttttggctctctgacagctcaaattaaagttgactccttttttaccactcaagtctcattctcattcttcacttgaaccagaataaaacc
18436300
<---------
ZAT2
--------->
At4g35610
----
--------->
ZAT2
----------->
RAV1(1)
<-----------
HVH21
--------->
At4g35610
--------->
ANAC58
--------->
WOX13(1)
--------->
REM1(1)
--------
----------->
GT1
--------->
HSFB2a(1)
----------->
RAV1(1)
--------->
At4g35610
--------->
ANAC58
*
TSS
<---------
ATHB12
<------
NtERF2
--------->
ANAC46
---------->
DOF2
<--------
P
<---------
HSFB2a(1)
<----------
DOF2
--------->
TOE2(3)
--------->
MYB46(3)
------>
RAV1(1)
----------->
GT1
<---------
KAN4(2)
<---------
At4g35610
--------->
At4g35610
acagaaagagagagaacagggtaagtaaaatcagagaa
ttttctcaatca
atgtcagcttcaatggctgcaacatcaacatcatcagcaacagctacaac
18436400
<-------
MYC3
<-------
MYC2
------->
MYC3
--------->
ALFIN1
------->
MYC2
--------->
ALFIN1
<---------
ALFIN1
<---------
ZAT2
----------->
RAV1(1)
--------->
At4g35610
--------->
ANAC46
--------->
ALFIN1
<---------
At4g35610
--------->
ANAC58
--------->
DAG2
--------->
ALFIN1
--------->
ANAC58
---------->
DOF2
<------
NtERF2
--------->
REM1(1)
--------->
AHL20(2)
----->
TOE2(3)
<-----------
RAV1(1)
------>
ZmHOX2a(1)
<---------
AHL20(2)
->
REM1(1)
<-----------
HVH21
--------->
ZAT2
---------->
ID1
--------->
ANAC46
<---------
ALFIN1
<-----
gtttataaagtgtgtcactgttggcgatggagctgtgggcaaaacttgtcttcttatttcctacaccagcaacacgttccccact
gtatataaatccatc
18436500
<-----------
GT1
<---------
YAB1
----------->
GT1
------>
ZmHOX2a(2)
====================
HOX2a_HOX2a
<------
ZmHOX2a(2)
=====================
HOX2a_HOX2a
<---------
ARR14(3)
--------->
ARR11(3)
<---------
ANAC58
--------->
ARR14(3)
<----------
DOF2
<---------
ARR11(3)
<---------
DAG2
--------->
ARR14(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
ANAC58
--------->
AGP1
<----------
DOF2
<---------
ANAC58
<-------
GAMYB
<---------
YAB1
<---------
ZAT6
xxxxxxxxxxxxxxxx>
smallRNA(i)
<----------
DOF2
----------->
ARR10
----------->
RAV1(1)
-
----
CCA1(2)
<---------
WOX13(1)
<---------
MYB46(3)
<------
ZmHOX2a(1)
<--------------
tctccctctctctcttttggattgcttttcttgatagcttttggtgactgttgagatcttgttattacag
gattatgttccaacagtgttcgacaatttc
18436600
---------->
DOF2
<---------
ANAC46
------>
MYB46(1)
<---------
ARR14(2)
<---------
MYB59
--------->
ARR14(2)
--------->
ANAC55(2)
<--
<---------
TOE2(3)
--------->
WOX13(1)
<---------
At4g35610
------>
MYB83
<--------
-------->
YAB1
--------->
At5g28300
<---------
LBD16
<-----------
GT1
<---------
ANAC58
-------
WRI1
----------->
GT1
<---------
GLK1(1)
<----------
DOF2
<---------
ANAC58
aatgctaatgttttagtcgatggtaaaactgtcaatctgggtctctgggatactgctg
gtaaatgcttttacctaatgtcaaagttgttcttgtctttag
18436700
------>
ZmHOX2a(1)
----------->
RAV1(1)
--------------->
AGL15
<---------
ARR11(3)
<---------------
AGL15
<----------
DOF2
--------->
ARR11(3)
<----------
DOF2
--------->
At4g35610
<---------
CCA1(2)
---------->
ID1
<-------
GAMYB
------->
TEIL
--------
DOF2
<---------
ARR11(3)
---------->
DOF2
<---------
CCA1(2)
--
DOF2
--------->
REM1(1)
<----------
DOF2
<---------
At4g35610
----------->
RAV1(1)
ctttatatctacaacaatatgtcaaggtctaatcttttggtccttttaaaagaagtcagttgaaaaatttgaatctttgatgcaacattgttttggttct
18436800
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AGI:
At2g44690.1
Description:
ARAC9/AtROP8/ROP8 (rho-related protein from plants 8); GTP binding. Identical to Rac-like GTP-binding protein ARAC9 precursor (ARAC9) [Arabidopsis Thaliana] (GB:Q9XGU0;GB:O80508); similar to ARAC3/ATROP6/RHO1PS/ROP6 (rho-related protein from plants 6), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT4G35020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70494.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); cont
Range:
from: 18436339
to: 18437879
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.