Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                              --------->GLK1(1)                 <----                                --------->ZAT2             ------->GAMYB                       <-----                                <---------STY1(2)         --------->ANAC58                --------->YAB1                                <---------ZAT2---------->DOF2 <---------GLK1(1)          <---------YAB1       <-----------RAV1(1)      --------->STY1(2)         --------->ANAC58           ------>NtERF2       --------->ALFIN1        --------->ANAC46         --------->MYB52(1)           --------->LBD16   <---------At4g35610         --------->ANAC58        <---------WRKY38(1)          --------->ANAC46   --------->At4g35610         --------->ANAC58        <---------WRKY12            <---------LBD16   ccttaagctgtgttgccatctctatattgctccaagctagcattgttgtaaagaaggccaacggaaatccaaacttcatgttgtctccggcatcatagta  18400400     <---------MYB52(1)    <-----------HVH21                   <---------AHL20(1)   --------->LBD16                      --------->AHL20(2) <---------LBD16                        --------->AHL20(1) ---->ZAT18          ------->TEIL--------->ANAC58                     <---------YAB1        <-------- -----ZAT18  ------->TEIL <-----------GT1                           <-----------GT1--------->DAG2 ------GT1<------ZmHOX2a(2)      --------->ANAC58               --------->AHL20(1)---------->DOF2 <--   ccctccggttagatcaacctatgcatttttacaataagcaaatattttagttgaacttgataaacatatattacaatacaaaaaaaaagggattgagatt  18400500                                   --------->ARR14(2)                                   <---------ARR14(2)                                   --------->GLK1(2)                                   <-----------ARR10                                  <---------ARR14(2)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                ----------->ARR10                              --------->ZAT18                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <xxxxxxxxxxxxxxxxsmallRNA(i)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                        xxxxxxxxxxxxxxxx>smallRNA(i)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <xxxxxxxxxxxxxxxxsmallRNA(i)                      <-----------ARR10                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    <xxxxxxxxxxxxxxxxsmallRNA(i)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  --------->HSFC1(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     xxxxxxxxxxxxxxxxxxxxxx                  <---------HSFC1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxx                  xxxxxxxxxxxxxxxx>smallRNA(i)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <---------ARR14(2)--------->ARR14(2)                        <---------HSFC1(1)                --------->ARR14(2)<---------GLK1(2)                         <---------HSFB2a(2)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          --------->HSFB2a(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            --------->At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     --------->ANAC58          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              <---------TOE1(2) <---------LBD16        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)      <-----------GT1 --------->ANAC58     <---------At4g35610       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ANAC46  <xxxxxxxxxxxxxxxxsmallRNA(i)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     --------->ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->At4g35610    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxx    <---------ANAC55(2)<xxxxxxxxxxxxxxxxsmallRNA(i)    <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxx -TOE2(3)<xxxxxxxxxxxxxxxxxsmallRNA(se3) ------>ZmHOX2a(1)<---------MYB46(3)--------->HSFC1(1)      - -------TOE2(3)xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tagattacatgagcatcagaaccgtctctaagcgcagaatctcctctccaagtaactctttggttcgaaggcaattttccagaacgttgagcttcgaaat  18400600                                                 --------->ANAC58                                                 --------->ANAC58                                                 --------->ANAC46                                                ------->PIF5                                                <-------PIF5                                               --------->ANAC46                                         --------->At4g35610                                 <---------HSFB2a(2)                                 <---------HSFC1(1)                                <---------ANAC58                                 --------->HSFB2a(2)                               <---------ANAC58        <----------DOF2          --------->HSFC1(1)                                <---------ANAC55(2) x>smallRNA(fl3)           --------->ATHB51  <---------ALFIN1                   --------->ARR14(2) xxsmallRNA(fl3)           <---------ICU4<---------At4g35610                    <xxxxxxxxxxxxxxxxxxxx xx>smallRNA(l2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <---------ARR14(2) xx>smallRNA(fl3) <---------ANAC58       <---------ZAT2               --------->ZAT6         -------- --------->DOF2   <---------ANAC58       --------->ZAT2<---------ETT(2)    --------->AtLEC2  --------   acaaaagactctttgtgagagcgtctccataatttctagagacagctccacgagccatcgacaatacaaataacacaatgcaaatacttgtccataagca  18400700                 <-------GAMYB      --------->CCA1(2)      <------ZmHOX2a(2)                                 <xxxxxxxxxxxxxxxxsmallRNA(i)     --------->ARR11(3)                             --------->ARR11(3)     --------->ARR14(2)                    <---------ICU4     <---------ARR14(2)            <---------AHL20(2) ------>ZmHOX2a(2)     <---------ARR11(3)            --------->AHL20(2)<------ZmHOX2a(2) xxxxsmallRNA(se3)           <---------MYB52(1)     <---------ARR11(3) ->ANAC58        --------->At4g35610     --------->GLK1(2)                 --------->ATHB12 ->ANAC58        <---------At4g35610   <---------AHL20(2)    ----------------->AGL2*TSS     <xxxxxxxx   ttgtgaagatccaattttcagttgagacatcgtttttttaaataatctttagacgatctcaagaccaattgtagaattgatttgattttctcttgtgttt  18400800                                                                                    <-------TEIL                                                                                <---------YAB1                 <---------ANAC58                                               <---------TOE2(3)                 <---------ANAC58                                           --------->TOE2(3)          ------->TEIL                                                     <--------HAHB4  <---------ARR11(1)                                                      <---------YAB1  <-----------ARR10                                                       <------ZmHOX2a(2)  --------->ARR11(3)                                                     <---------ARR11(3)  <---------ARR14(2)                   --------->GLK1(2)                 --------->ARR11(3)  <---------ARR11(3)                  <---------GLK1(2)                 --------->YAB1  --------->ARR14(2)           <---------AHL20(2)                       <------ZmHOX2a(1) --------->GLK1(1)         --------------->AGL15                      <---------TOE1(3) <---------CCA1(2)         <---------------AGL15                      <---------TOE2(3) xxxxxxxxxxxxxxxsmallRNA(si3)<-----------TBP                   <-----------------AGL2--------->YAB1   ggcatatctatgtatatgtccgtgttcaactatttatagagaatctatataagatggaatccatggctaattaaggatcattaacattcgtagttcttac  18400900                                                                                                   --                                                                                                   <-                                                                                                   --                                   --------->YAB1                                                 <--                                 ------>ZmHOX2a(2)                                                ---           --------->At4g35610  <------ZmHOX2a(2)                                                 ---     --------->AHL20(1)        <---------AGP1                                                  ------     <---------AHL20(1)        --------->ARR11(3)                      --------->CCA1(2)       <-----     --------->AHL20(2)        <---------ARR11(3)                     --------->ARR11(3)      <------     <---------AHL20(2)       <---------CCA1(2)                 ------>ZmHOX2a(1)             <------    --------->AHL20(2)   ------->TEIL --------->YAB1           --------->TOE2(3)        <---------TOE2(3)    <---------AHL20(2)<---------REM1(1)         --------->ARR11(3)    <---------ARR11(3)<---------YAB1  --------->YAB1     <---------------AtSPL8     <---------ARR11(3)---------->DOF2      --------->YAB1   tcaaaaataaattagctaaaaatgttgtacctagatctcataatattagacatcttctcatttatcctaaaagatatagacaagaccaataagattgcga  18401000        <---------MYB52(1)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <--------HAHB4  --------->YAB1 <---------YAB1 ------------->AGL15 --------------AGL15                       <<<<<<<<<<GT-3b ------->YAB1                <---------AHL20(2) ---------------AGL3         --------->AHL20(2) -------------->AGL3         <---------AHL20(1) -------------->AGL2         --------->AHL20(1)                 --------->YAB1 --->ZAT18                   <---------ARR11(3)          <---------ARR11(3) ----ZAT18                   --------->ARR11(3)          --------->ARR11(3)                   <------ ---ANAC58                  --------->AHL20(2)          <---------CCA1(2)    ------->TEIL   <-------- ---ANAC58--------->MYB59 --------->AHL20(2)         ------->TEIL  --------->YAB1           <--------   actataattagttaggctatcttcttaaaaatatattccttctatttttcttatgtatatatctattaataatcttatgcattttttgaaagtttcttac  18401100                                                                   ---------->ID1                                                             <---------ARR14(2)       <---------AHL20(2)                                                             --------->ARR14(2)  <---------AHL20(2)    --------->REM1(2)                                        --------->ARR11(3)  --------->AHL20(2)   --------->AtLEC2                                          <---------GLK1(2)   <---------AHL20(1) -----GT1                --------->WRKY18(1)            <-----------GT1      <---------AHL20(2) -ANAC58      <---------At5g28300                  <---------AHL20(2)       <---------YAB1         -- -ANAC58     <-----------GT1                      --------->AHL20(2)      <---------ICU4           <-   tatccatgtagaaatttacagtttttggtcaatattctttcaatcttttgtataaaatttacagattttgtcttaatttttattttatttttttttgcat  18401200                                                          <---------AHL20(2)                                                         xxxxxxxxxxxxxxxx>smallRNA(i)                                                        <---------RVE1(1)                                                       <---------ARR11(3)                                                  --------->TOE2(3)                                                --------->ARR11(3)                                                <---------ARR11(3)                                               <---------GLK1(1)                                               <---------CCA1(1)                                               --------->GLK1(1)                                               --------->RVE1(1)                                               <---------RVE1(1)                                          <-------TEIL <---------GLK1(2)                                      <---------------AtSPL3           <---------MYB46(3)   <---------------AtSPL8 --------->ARR11(3)    <-----------GT1           --------->YAB1  --------->ARR11(3) ------->ICU4               <---------WOX13(1)<---------ARR11(3)             --------->AHL20(2)     < --------YAB1        <---------YAB1   <---------------AtSPL8             ----------->GT1     --------   catttttaaccatttgttgatttcttattgaatgatagtacaagtacagatatcttagattttttttttttttttttgttaaaatttttcaagagaatca  18401300  Previous    Next  AGI:  At2g44560.1    Description:  ATGH9B11 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B11); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 14 precursor [Arabidopsis Thaliana] (GB:Q8S8Q4;GB:O64891); similar to ATGH9B12 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B12), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44570.1); similar to ATGH9B9 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B9), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44540.1); similar to ATGH9B10 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44550.1) Range:  from: 18398856    to: 18400783    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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