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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                               <----
                                                             --------->GLK1(1)                 -----
                               <---------STY1(2)          ------->GAMYB                       <-----
                               --------->STY1(2)         --------->ANAC58                --------->YAB1
                               --------->ZAT2            --------->ANAC58               <---------YAB1
      --------->ALFIN1         <---------ZAT2---------->DOF2 <---------GLK1(1)      --------->LBD16
      <-----------RAV1(1)     --------->ANAC58         --------->MYB52(1)           ------>NtERF2
  --------->At4g35610         --------->ANAC58        <---------WRKY38(1)          --------->ANAC46
  <---------At4g35610         --------->ANAC46        <---------WRKY12            <---------LBD16
 
ccttaagctgtgttgccatctctatattgctccaagctagcattgttgtaaagaaggccaacggaaatccaaacttcatgttgtctccggcatcatagta  18400400
    <---------MYB52(1)
   <-----------HVH21                   <---------AHL20(1)
  --------->LBD16                      --------->AHL20(1)
<---------LBD16                        --------->AHL20(2)
-----ZAT18          ------->TEIL--------->ANAC58                     <---------YAB1        <--------
---->ZAT18  ------->TEIL <-----------GT1                           <-----------GT1--------->DAG2
------GT1<------ZmHOX2a(2)      --------->ANAC58               --------->AHL20(1)---------->DOF2 <--
 
ccctccggttagatcaacctatgcatttttacaataagcaaatattttagttgaacttgataaacatatattacaatacaaaaaaaaagggattgagatt  18400500
                                  <---------ARR14(2)
                                  --------->ARR14(2)
                                  <-----------ARR10
                                  --------->GLK1(2)
                                 <---------GLK1(2)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                               ----------->ARR10
                             --------->ZAT18
                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                         <xxxxxxxxxxxxxxxxsmallRNA(i)
                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                       <xxxxxxxxxxxxxxxxsmallRNA(i)
                       xxxxxxxxxxxxxxxx>smallRNA(i)
                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                     <-----------ARR10
                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                   <xxxxxxxxxxxxxxxxsmallRNA(i)
                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)
                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)
                 xxxxxxxxxxxxxxxx>smallRNA(i)                                 xxxxxxxxxxxxxxxxxxxxxx
                 <---------HSFC1(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxx
                 --------->HSFC1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
               <---------ARR14(2)--------->ARR14(2)                        <---------HSFC1(1)
               --------->ARR14(2)<---------ARR14(2)                        <---------HSFB2a(2)
             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          --------->HSFB2a(2)
            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                  xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
           --------->At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
          xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    --------->ANAC58
         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)             <---------TOE1(2) <---------LBD16
       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <-----------GT1 --------->ANAC58     --------->At4g35610
      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ANAC58  <xxxxxxxxxxxxxxxxsmallRNA(i)
     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     --------->ANAC46  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------At4g35610
   <---------ANAC55(2)<xxxxxxxxxxxxxxxxsmallRNA(i)    <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxx
 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxx
-TOE2(3)<xxxxxxxxxxxxxxxxxsmallRNA(se3) ------>ZmHOX2a(1)<---------MYB46(3)--------->HSFC1(1)      -
-------TOE2(3)xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
 
tagattacatgagcatcagaaccgtctctaagcgcagaatctcctctccaagtaactctttggttcgaaggcaattttccagaacgttgagcttcgaaat  18400600
                                                --------->ANAC58
                                                --------->ANAC58
                                                --------->ANAC46
                                               <-------PIF5
                                               ------->PIF5
                                              --------->ANAC46
                                        --------->At4g35610
                                <---------HSFB2a(2)
                                --------->HSFB2a(2)                               <---------ANAC58
                                --------->HSFC1(1)                                <---------ANAC58
       <----------DOF2          <---------HSFC1(1)                                <---------ANAC55(2)
x>smallRNA(fl3)           --------->ATHB51  <---------ALFIN1                   --------->ARR14(2)
xxsmallRNA(fl3)           <---------ICU4<---------ZAT2                         <xxxxxxxxxxxxxxxxxxxx
xx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <---------ARR14(2)
xx>smallRNA(l2)  <---------ANAC58       <---------At4g35610          --------->ZAT6         --------
--------->DOF2   <---------ANAC58       --------->ZAT2<---------ETT(2)    --------->AtLEC2  --------
 
acaaaagactctttgtgagagcgtctccataatttctagagacagctccacgagccatcgacaatacaaataacacaatgcaaatacttgtccataagca  18400700
                --------->At4g35610
     <------ZmHOX2a(2)
     --------->CCA1(2)                                 <xxxxxxxxxxxxxxxxsmallRNA(i)
    <---------ARR14(2)                             --------->ARR11(3)
    --------->ARR11(3)                    <---------ICU4
    --------->ARR14(2)                  --------->GLK1(2)
    <---------ARR11(3)            <---------AHL20(2) ------>ZmHOX2a(2)
xxxxsmallRNA(se3)           <---------MYB52(1)     <---------ARR11(3)
->ANAC58        <-------GAMYB     --------->AHL20(2)<------ZmHOX2a(2)     --------->ATHB12
->ANAC58        <---------At4g35610   <---------AHL20(2)    ----------------->AGL2*TSS     <xxxxxxxx
 
ttgtgaagatccaattttcagttgagacatcgtttttttaaataatctttagacgatctcaagaccaattgtagaattgatttgattttctcttgtgttt  18400800
                                                                                   <-------TEIL
                                                                               <---------YAB1
                <---------ANAC58                                               <---------TOE2(3)
                <---------ANAC58                                           --------->TOE2(3)
         ------->TEIL                                                     <--------HAHB4
 <-----------ARR10                                                       <---------YAB1
 --------->ARR14(2)                                                      <------ZmHOX2a(2)
 --------->ARR11(3)                                                     <---------ARR11(3)
 <---------ARR11(1)                   --------->GLK1(2)                 --------->ARR11(3)
 <---------ARR14(2)                  <---------GLK1(2)                 <------ZmHOX2a(1)
 <---------ARR11(3)           <---------AHL20(2)                       --------->YAB1
--------->GLK1(1)         <---------------AGL15                      <---------TOE1(3)
<---------CCA1(2)         --------------->AGL15                      <---------TOE2(3)
xxxxxxxxxxxxxxxsmallRNA(si3)<-----------TBP                   <-----------------AGL2--------->YAB1
 
ggcatatctatgtatatgtccgtgttcaactatttatagagaatctatataagatggaatccatggctaattaaggatcattaacattcgtagttcttac  18400900
                                                                                                  --
                                                                                                  <-
                                                                                                  --
                                  --------->YAB1                                                 <--
                                ------>ZmHOX2a(2)                                                ---
          --------->At4g35610  <------ZmHOX2a(2)                                                 ---
    <---------AHL20(1)        <---------ARR11(3)                                              ------
    --------->AHL20(2)        <---------AGP1                          --------->CCA1(2)       <-----
    <---------AHL20(2)        --------->ARR11(3)                     --------->ARR11(3)      <------
    --------->AHL20(1)       <---------CCA1(2)                 ------>ZmHOX2a(1)             <------
   <---------AHL20(2)   ------->TEIL --------->YAB1           --------->TOE2(3)        <---------TOE2(3)
   --------->AHL20(2)<---------REM1(1)         --------->ARR11(3)    <---------ARR11(3)<---------YAB1
 --------->YAB1     <---------------AtSPL8     <---------ARR11(3)---------->DOF2      --------->YAB1
 
tcaaaaataaattagctaaaaatgttgtacctagatctcataatattagacatcttctcatttatcctaaaagatatagacaagaccaataagattgcga  18401000
       <---------MYB52(1)
   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
 <--------HAHB4
 --------->YAB1
<---------YAB1
------------->AGL15
--------------AGL15                       <<<<<<<<<<GT-3b
------->YAB1                <---------AHL20(2)
---------------AGL3         --------->AHL20(2)
-------------->AGL3         <---------AHL20(1)
-------------->AGL2         --------->AHL20(1)                 --------->YAB1
--->ZAT18                   <---------ARR11(3)          <---------ARR11(3)
----ZAT18                   --------->ARR11(3)          --------->ARR11(3)                   <------
---ANAC58                  --------->AHL20(2)          <---------CCA1(2)    ------->TEIL   <--------
---ANAC58--------->MYB59 --------->AHL20(2)         ------->TEIL  --------->YAB1           <--------
 
actataattagttaggctatcttcttaaaaatatattccttctatttttcttatgtatatatctattaataatcttatgcattttttgaaagtttcttac  18401100
                                                                  ---------->ID1
                                                            <---------ARR14(2)       <---------AHL20(2)
                                                            --------->ARR14(2)  <---------AHL20(2)
   --------->REM1(2)                                        --------->ARR11(3)  --------->AHL20(2)
  --------->AtLEC2                                          <---------GLK1(2)   <---------AHL20(1)
-----GT1                --------->WRKY18(1)            <-----------GT1      <---------AHL20(2)
-ANAC58      <---------At5g28300                  <---------AHL20(2)       <---------YAB1         --
-ANAC58     <-----------GT1                      --------->AHL20(2)      <---------ICU4           <-
 
tatccatgtagaaatttacagtttttggtcaatattctttcaatcttttgtataaaatttacagattttgtcttaatttttattttatttttttttgcat  18401200
                                                         <---------AHL20(2)
                                                        xxxxxxxxxxxxxxxx>smallRNA(i)
                                                       <---------RVE1(1)
                                                      <---------ARR11(3)
                                                 --------->TOE2(3)
                                               --------->ARR11(3)
                                               <---------ARR11(3)
                                              <---------GLK1(1)
                                              <---------CCA1(1)
                                              --------->GLK1(1)
                                              --------->RVE1(1)
                                              <---------RVE1(1)
                                         <-------TEIL <---------GLK1(2)
                                     <---------------AtSPL3
          <---------MYB46(3)   <---------------AtSPL8 --------->ARR11(3)
   <-----------GT1           --------->YAB1  --------->ARR11(3)
------->ICU4               <---------WOX13(1)<---------ARR11(3)             --------->AHL20(2)     <
--------YAB1        <---------YAB1   <---------------AtSPL8             ----------->GT1     --------
 
catttttaaccatttgttgatttcttattgaatgatagtacaagtacagatatcttagattttttttttttttttttgttaaaatttttcaagagaatca  18401300
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AGI:  At2g44560.1   
Description:  ATGH9B11 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B11); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 14 precursor [Arabidopsis Thaliana] (GB:Q8S8Q4;GB:O64891); similar to ATGH9B12 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B12), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44570.1); similar to ATGH9B9 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B9), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44540.1); similar to ATGH9B10 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44550.1)
Range:  from: 18398856    to: 18400783    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.