Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              <------                                                   --------->ARR11(3)             <---------ICU4                                          --------->DOF5.7(2)                     <--------HAHB4                                          <---------MYB52(1)                     --------->ICU4                                         --------->TOE2(3)              --------->ATHB12     -------- <-----------RAV1(1)        ---------->DOF2      <---------TOE2(3)  --------->DAG2--------->ATHB12 ---------TOE2(3)    ----------->GT1    ----------->GT1            --------->ICU4<---------YAB1  ----   tttatgttgatgagaagtgtgatcagttaataaagaattaagacgttaattaagaaattgatatgtgcaaaaattgatagggcatcattaggcaatttaa  18287300                                 --------->YAB1    --------->YAB1              <---------ATHB12 --------->YAB1               --------->WOX13(1)                                   <---------DAG2 -->AHL20(2)                <---------ATHB12                   <---------DAG2      <----------DOF2 ---AHL20(2)              ------>ZmHOX2a(1)                  ------->TEIL <---------AHL20(2)       <- ->AHL20(2)          <-----------GT1                <---------AHL20(2)   --------->AHL20(2)<--------- ------>DOF2        <---------AHL20(2) <---------AHL20(2)   <-----------GT1     <-----------GT1------   aaagaataatagagaatggcatttaatcctatcaatcatatttagtttgcctatttagttttgaacctttcgattttaaatttaactttattgtcactat  18287400                                                                                    <---------TOE2(3)                                                                        --------->ANAC58                                                                        --------->ANAC58      -------                                            --------->TOE1(2)           --------->ANAC46----------->GT1   ---------->DOF2                   --------->CCA1(2)           <---------GLK1(1) ---------->DOF2 --------HSFB2a(2)                  --------->ARR11(1)   --------->AHL20(2)   --------------->AGL15 --GT1                              <---------ARR11(3)   <---------AHL20(2)   <---------------AGL15 --->ZAT14      <---------ICU4  ---------->DOF2         --------->AHL20(2)   ----------------->AGL3   accagaaaagaattgtagtcatttctccaaatgaaaaagatttgaacttgggaacaaaaaaaatttgaaatcccaagaaaccttttaaagtagtaacaaa  18287500                                                              --------->ARR14(2)                 ----------->GT1                              <---------ARR11(3)               --------->ZAT14                        --------->AHL20(2)               <---------ZAT14                        <---------AHL20(1)       --------->KAN4(2)                              --------->AHL20(1)      <---------KAN4(1)                            --------->YAB1        <---------AHL20(2)      <---------HSFC1(2)                 <---------TOE2(3)    <---------GLK1(2)      --------->KAN4(1)                ---------->DOF2<---------AHL20(2)<---------AHL20(2)      --------->HSFB2a(1)           <---------HSFB2a(2)       --------->ARR11(3)         --------->TOE1(2)      --------->HSFC1(2)      <----------DOF2    --------->At5g28300<----------DOF2      --------->TOE2(2)      <---------HSFB2a(1)     <---------DAG2    ----------->GT1--------->ARR14(1)        --------->TOE1(3)     <---------KAN4(2)     <-----------GT1  ----------->HVH21 <---------ARR14(2)        <---------HSFB2a(1) --->DOF2 ----------------->AGL1    --------->HSFB2a(2)     ----------->ARR10<---------AHL20(2)   ggagtagaatgttccagttcagtaaaatttcactttttctataaaggtgacagtaataaaataagatactcttttttattttaaaaaaaaaccttcgaat  18287600            --------->At4g35610           <---------ARR14(2)                       ------>MYB83           --------->GLK1(2)                        ------>MYB46(1)           --------->ARR14(2)                    ------------>CBF          <---------GLK1(2)                      --------->MYB46(3)      ---------->DOF2                           --------->ANAC58   --------->LBD16                              -------->P  --------->HSFC1(1)             ----------->GT1--------->ANAC58  <---------HSFB2a(2)   --------->AHL20(2)  --------->ANAC58  --------->HSFB2a(2)   --------->AHL20(1)  --------->ANAC58  <---------HSFC1(1)    <---------AHL20(2)---------->DOF2          --------->GLK1(2)---------->ID1 <---------LBD16     --------->YAB1   ---------->DOF2      ------------>CBF   <-----------GT1      *TSS   ttttccagaaaagaatctgacaaaaataaaatgaacagagaaaagaaagcaaccaatcttatgcaatagaatccaaaaattcacttgtctctatttttta  18287700                                                                                                    -                                                                                                   --                                                      --------->ANAC58                            <--                 <---------TOE2(3)       --------->ZAT18  --------->ANAC58                       ----                 <---------TOE1(3)       <---------ZAT18  --------->ANAC58                       ----              <---------YAB1         <---------ICU4   --------->ANAC46                          -----        ------>ZmHOX2a(1)           <---------YAB1    --------->ANAC58                         ------        <----------DOF2             --------->ICU4<---------AHL20(2)                          -------    <---------PCF2         ---------->DOF2        --------->AHL20(2)                     --------->AHL20(2)   aaaatgggtcctttttatgaaggttttgccaaagtgtcattagtgcccagaattaaacgcaatccacttcaatccaaaatcccatactaaattaaaacca  18287800     <------ZmHOX2a(1) -------->ANAC46 ----->GAMYB -------ALFIN1                                                                         <------NtERF2 -->MYB83---------->DOF2                  <-------GAMYB                               ------>NtERF2 -->MYB46(1)                             <-----------RAV1(1)                         <---------ETT(2) ------>RAV1(1)                  <---------ALFIN1            <----------DOF2         <----------ID1 --->AtMYB61              <---------At4g35610        --------->TOE1(3)       <-----------GT1    ----- -->MYB46(3)              --------->At4g35610    ---------->DOF2         <----------DOF2      <------   acacacaggaagaaagaagaaacctctcatcttcccctctcttctgttgaagaaagcttaaacctttctgggtttcttttaactatggcgacaagggtta  18287900                                <---------ANAC58                                      --------->SPL7                              <---------YAB1                                       --------->ANAC55(2)                         <---------MYB46(3)                                        <---------ANAC55(2)                        --------->ALFIN1                                          --------------->AtSPL8                        <---------AtMYB61                                         --------------->AtSPL3                        <---------DEAR3(1)                                      --------->ARR14(2)                     <---------DREB2C(2)      <---------ANAC58                  <---------ARR14(2)                     <---------DEAR3(1)       <---------ANAC58            ------>ZmHOX2a(2)                  ----------->HVH21        <-----------RAV1(1)           <------ZmHOX2a(2) ---->MYB52(2)    --------->ICU4<---------ANAC58   <---------LBD16      <---------ARR14(2) --P              ----------->TGA1      ------>ZmHOX2a(1)               --------->ARR14(2)   gtttcttcttagctctggtaatgacggtggtgattcttgctccttctgtcgtctctggagaaaatgggttttccgatcttaaaatccgtactcacttgaa  18288000             --------->At4g35610             <---------ZAT2             --------->ZAT2             <---------At4g35610                                                              -------        --------->ANAC58           --------->GLK1(1)                                         --------        --------->ANAC58      ----------->GT1--------->YAB1                     <----------DOF2    --        --------->ANAC46     <---------TOE1(3)                            <-------TEIL       <-------      --------->MYB46(3)     <---------TOE2(3)                      ---------->DOF2         <--------   acgactcaacaagccagctctcaaatcgattaaggtgaattccacagtgatattagagagaaaactccataaaagtttcattcttttgctgttttctggg  18288100                                                                   ------->GAMYB                                                                  --------->MYB46(3)                                          <---------WRKY18(1)    ------>MYB83                                        <---------WOX13(1)       ------>MYB46(1)                                      --------->ATHB12           -------->P                                     <---------YAB1            --------->MYB46(3)  --------->ICU4                   --------->CCA1(2)           --------->AtMYB61 -->LBD16                         <---------ARR11(3)          --------->MYB46(3)                ----- ->HSFB2a(2)                      <---------ARR14(2)       ----------->HVH21                 -------- ------->ICU4                     --------->ARR14(2)   <---------ATHB12               <---------At4g35610 --HSFB2a(2)                      --------->ARR11(3)   --------->MYB46(3)          ------>ZmHOX2a(1) -LBD16                  <-----------RAV1(2)         --------->WOX13(1)<----------DOF2--------->At4g35610   aataattttgagtttcttaaacagagcccagatggagatatgattgactgtgttccaatcactgaccaaccagcttttgctcatcctctgctcattaatc  18288200  Previous    Next  AGI:  At2g44210.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67164.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 18287699    to: 18289952    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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