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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
-------
<------
--------->
ARR11(3)
<---------
ICU4
--------->
DOF5.7(2)
<--------
HAHB4
<---------
MYB52(1)
--------->
ICU4
--------->
TOE2(3)
--------->
ATHB12
--------
<-----------
RAV1(1)
---------->
DOF2
<---------
TOE2(3)
--------->
DAG2
--------->
ATHB12
---------
TOE2(3)
----------->
GT1
----------->
GT1
--------->
ICU4
<---------
YAB1
----
tttatgttgatgagaagtgtgatcagttaataaagaattaagacgttaattaagaaattgatatgtgcaaaaattgatagggcatcattaggcaatttaa
18287300
--------->
YAB1
--------->
YAB1
<---------
ATHB12
--------->
YAB1
--------->
WOX13(1)
<---------
DAG2
-->
AHL20(2)
<---------
ATHB12
<---------
DAG2
<----------
DOF2
---
AHL20(2)
------>
ZmHOX2a(1)
------->
TEIL
<---------
AHL20(2)
<-
->
AHL20(2)
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(2)
<---------
------>
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
<-----------
GT1
------
aaagaataatagagaatggcatttaatcctatcaatcatatttagtttgcctatttagttttgaacctttcgattttaaatttaactttattgtcactat
18287400
<---------
TOE2(3)
--------->
ANAC58
--------->
ANAC58
-------
--------->
TOE1(2)
--------->
ANAC46
----------->
GT1
---------->
DOF2
--------->
CCA1(2)
<---------
GLK1(1)
---------->
DOF2
--------
HSFB2a(2)
--------->
ARR11(1)
--------->
AHL20(2)
--------------->
AGL15
--
GT1
<---------
ARR11(3)
<---------
AHL20(2)
<---------------
AGL15
--->
ZAT14
<---------
ICU4
---------->
DOF2
--------->
AHL20(2)
----------------->
AGL3
accagaaaagaattgtagtcatttctccaaatgaaaaagatttgaacttgggaacaaaaaaaatttgaaatcccaagaaaccttttaaagtagtaacaaa
18287500
--------->
ARR14(2)
----------->
GT1
<---------
ARR11(3)
--------->
ZAT14
--------->
AHL20(2)
<---------
ZAT14
<---------
AHL20(1)
--------->
KAN4(2)
--------->
AHL20(1)
<---------
KAN4(1)
--------->
YAB1
<---------
AHL20(2)
<---------
HSFC1(2)
<---------
TOE2(3)
<---------
GLK1(2)
--------->
KAN4(1)
---------->
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
--------->
HSFB2a(1)
<---------
HSFB2a(2)
--------->
ARR11(3)
--------->
TOE1(2)
--------->
HSFC1(2)
<----------
DOF2
--------->
At5g28300
<----------
DOF2
--------->
TOE2(2)
<---------
HSFB2a(1)
<---------
DAG2
----------->
GT1
--------->
ARR14(1)
--------->
TOE1(3)
<---------
KAN4(2)
<-----------
GT1
----------->
HVH21
<---------
ARR14(2)
<---------
HSFB2a(1)
--->
DOF2
----------------->
AGL1
--------->
HSFB2a(2)
----------->
ARR10
<---------
AHL20(2)
ggagtagaatgttccagttcagtaaaatttcactttttctataaaggtgacagtaataaaataagatactcttttttattttaaaaaaaaaccttcgaat
18287600
--------->
At4g35610
<---------
ARR14(2)
------>
MYB83
--------->
GLK1(2)
------>
MYB46(1)
--------->
ARR14(2)
------------>
CBF
<---------
GLK1(2)
--------->
MYB46(3)
---------->
DOF2
--------->
ANAC58
--------->
LBD16
-------->
P
--------->
HSFC1(1)
----------->
GT1
--------->
ANAC58
<---------
HSFB2a(2)
--------->
AHL20(2)
--------->
ANAC58
--------->
HSFB2a(2)
--------->
AHL20(1)
--------->
ANAC58
<---------
HSFC1(1)
<---------
AHL20(2)
---------->
DOF2
--------->
GLK1(2)
---------->
ID1
<---------
LBD16
--------->
YAB1
---------->
DOF2
------------>
CBF
<-----------
GT1
*
TSS
ttttccagaaaagaatctgacaaaaataaaatgaacagagaaaagaaagcaaccaatcttatgcaatagaatccaaaaattcacttgtctctattttt
ta
18287700
-
--
--------->
ANAC58
<--
<---------
TOE2(3)
--------->
ZAT18
--------->
ANAC58
----
<---------
TOE1(3)
<---------
ZAT18
--------->
ANAC58
----
<---------
YAB1
<---------
ICU4
--------->
ANAC46
-----
------>
ZmHOX2a(1)
<---------
YAB1
--------->
ANAC58
------
<----------
DOF2
--------->
ICU4
<---------
AHL20(2)
-------
<---------
PCF2
---------->
DOF2
--------->
AHL20(2)
--------->
AHL20(2)
aaaatgggtcctttttatgaaggttttgccaaagtgtcattagtgcccagaattaaacgcaatccacttcaatccaaaatcccatactaaattaaaacca
18287800
<------
ZmHOX2a(1)
-------->
ANAC46
----->
GAMYB
-------
ALFIN1
<------
NtERF2
-->
MYB83
---------->
DOF2
<-------
GAMYB
------>
NtERF2
-->
MYB46(1)
<-----------
RAV1(1)
<---------
ETT(2)
------>
RAV1(1)
<---------
ALFIN1
<----------
DOF2
<----------
ID1
--->
AtMYB61
<---------
At4g35610
--------->
TOE1(3)
<-----------
GT1
-----
-->
MYB46(3)
--------->
At4g35610
---------->
DOF2
<----------
DOF2
<------
acacacaggaagaaagaagaaacctctcatcttcccctctcttctgttgaagaaagcttaaacctttctgggtttcttttaact
atggcgacaagggtta
18287900
<---------
ANAC58
--------->
SPL7
<---------
YAB1
--------->
ANAC55(2)
<---------
MYB46(3)
<---------
ANAC55(2)
--------->
ALFIN1
--------------->
AtSPL8
<---------
AtMYB61
--------------->
AtSPL3
<---------
DEAR3(1)
--------->
ARR14(2)
<---------
DREB2C(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
DEAR3(1)
<---------
ANAC58
------>
ZmHOX2a(2)
----------->
HVH21
<-----------
RAV1(1)
<------
ZmHOX2a(2)
---->
MYB52(2)
--------->
ICU4
<---------
ANAC58
<---------
LBD16
<---------
ARR14(2)
--
P
----------->
TGA1
------>
ZmHOX2a(1)
--------->
ARR14(2)
gtttcttcttagctctggtaatgacggtggtgattcttgctccttctgtcgtctctggagaaaatgggttttccgatcttaaaatccgtactcacttgaa
18288000
--------->
At4g35610
<---------
ZAT2
--------->
ZAT2
<---------
At4g35610
-------
--------->
ANAC58
--------->
GLK1(1)
--------
--------->
ANAC58
----------->
GT1
--------->
YAB1
<----------
DOF2
--
--------->
ANAC46
<---------
TOE1(3)
<-------
TEIL
<-------
--------->
MYB46(3)
<---------
TOE2(3)
---------->
DOF2
<--------
acgactcaacaagccagctctcaaatcgattaag
gtgaattccacagtgatattagagagaaaactccataaaagtttcattcttttgctgttttctggg
18288100
------->
GAMYB
--------->
MYB46(3)
<---------
WRKY18(1)
------>
MYB83
<---------
WOX13(1)
------>
MYB46(1)
--------->
ATHB12
-------->
P
<---------
YAB1
--------->
MYB46(3)
--------->
ICU4
--------->
CCA1(2)
--------->
AtMYB61
-->
LBD16
<---------
ARR11(3)
--------->
MYB46(3)
-----
->
HSFB2a(2)
<---------
ARR14(2)
----------->
HVH21
--------
------->
ICU4
--------->
ARR14(2)
<---------
ATHB12
<---------
At4g35610
--
HSFB2a(2)
--------->
ARR11(3)
--------->
MYB46(3)
------>
ZmHOX2a(1)
-
LBD16
<-----------
RAV1(2)
--------->
WOX13(1)
<----------
DOF2
--------->
At4g35610
aataattttgagtttcttaaacag
agcccagatggagatatgattgactgtgttccaatcactgaccaaccagcttttgctcatcctctgctcattaatc
18288200
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AGI:
At2g44210.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G55360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67164.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314)
Range:
from: 18287699
to: 18289952
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.