Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------AHL20(1) ----->AHL20(1) ------AHL20(2) -----AHL20(2) ---->AHL20(2) ---->YAB1                                  <---------HSFB2a(2) >AHL20(2)                                  --------->HSFB2a(2) -AHL20(2)        <-----------GT1    <---------WOX13(1)        ---------->DOF2 --------->AHL20(2) >AHL20(1)  --------->TOE2(3)     <---------YAB1    <---------YAB1<----------ID1<---------AHL20(2)   atattgttttttaaacttaataactaatttctacttgtaattggtttcagaaatactattgattttaaagaacaaactaaattttatatcgaatttttgt  18275500                                        --------->ARR11(3)                                        <---------ARR11(3)                         <---------AHL20(2)                                       --------->RVE1(1)        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                <---------AHL20(2)            <---------ANAC58    <-----------TBP                                <---------AHL20(1)            <---------ANAC58  --------->AHL20(2)                                --------->AHL20(2)          --------->ARR11(3)  <---------AHL20(2)                                --------->AHL20(1)  <---------AHL20(2)         --------->AHL20(2)                --------->AHL20(1)  <---------AHL20(2)  <---------AHL20(2)     <---------AHL20(2)                --------->AHL20(2)  --------->AHL20(2)  --------->AHL20(2)    <---------YAB1                <---------AHL20(2) --------->AHL20(2)   --------->AHL20(1) <---------AHL20(2)       <               --------->AHL20(2)  <---------AHL20(2)   <---------AHL20(1) <---------YAB1         <--         <-----------GT1   <---------YAB1           --------->AHL20(2)    <---------AHL20(1)   <-----      <---------------AtSPL8   <---------ATHB12    <---------AHL20(2) ------>ZmHOX2a(1)   <xxxxxxxxxx      --------------->AtSPL8   --------->AHL20(2)  --------->AHL20(2)<---------MYB59     <---------TOE2(3)   atacaaaatttgtacaattttattagtttatcaataaattaatatctctctaaattaataaatttcttggtcctaatattattaatttatagaggttttg  18275600                                                                     --------->TCP16(1)     ------>NtERF2                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------DDF1                                            <---------YAB1     <---------RAP2.6(3)                                      <---------AHL20(1)     ----------->RAV1(1)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ----------->HVH21                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <--------    <---------ETT(1)                              ----------->RAV1(1)------->TEIL     ----------->GT1    --------->RAP2.6(2)                    --------->ATHB12   --------->AHL20(2)     <---------TOE2(3)    --------->DREB2C(2)                   <---------AHL20(2)  --------->AHL20(1)    ---------->DOF2 ---------RAP2.6(2)                       --------->AHL20(2)  <---------AHL20(2) --------->At4g35610 ---------RAV1(1)    --------->ANAC46  --------->ATHB12  ------------>CBF        xxxxxxxxxxxxxxxxxxxx ------RAV1(1)    ----------->HVH21   <---------ATHB12  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <x xxxxxxxxxxsmallRNA(se3) --------->At4g35610     <----------ID1<---------AHL20(2)<---------At4g35610   ttgtggccgacatgaattcttcgacgcagaagaagcccaaatgatttattagcaacaaaaacaatataatggacccagtatggagctaaagttatattgt  18275700                                                      <---------ANAC58                                                      <---------ANAC58                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                 <-----------RAV1(1)                                                --------->ARR11(3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                      <---------ICU4                   <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <----------ID1                 <---------ANAC46              xxxxxxxxxxxxxxxx>smallRNA(fl3)      <---------TOE2(3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)----------->TGA1            <-----------RAV1(1)             <------ZmHOX2a(1)                     ---------->DOF2<xxx    ----------->HVH21   <-----------GT1   xxxxxxxxxxxxxxxxxxx>smallRNA(i2)       --------->AHL20(2) ----CBF<------------CBF<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->YAB1      <---------AHL20(2) x>smallRNA(i2)<---------ANAC46   <xxxxxxxxxxxxxxxxsmallRNA(i)                 <-----------TBP------- xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   tcatatgtgacattgtgttgggggttttagcaccttgatacaacgaggaatatgttgcttcactcatcagtttttggagttatttaaagatgacgaaaaa  18275800                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                          --------->bZIP60(1)                                                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                        <---------At4g35610                                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                      <---------ICU4                <-----------HVH21 <---------YAB1-                              --------->TGA2(2)                     <---------RAP2.6(3)--------->YAB1                             <-----------HVH21                     xxxxxxxxxxxxxxxx>smallRNA(i)     <                            --------->ANAC46                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)-                            --------->ANAC58         <---------ANAC58   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                            --------->bZIP60(2)      <---------ANAC46   --------->At4g35610  <-------                            --------->bZIP60(1)      <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            --------->ANAC58  <----------DOF2  xxxxxxxxxxxxxxxx>smallRNA(i)  <-------                            xxxxxxxxxxxxxxxx>smallRNA(i)    <XXXXXXXXXXXXXXXXXXXXMIR165A/B   --------   <---------ARR14(2)      ------->TEIL       xxxxxxxxxxxxxxxx>smallRNA(i)<---------bZIP60(1)--------  <------ZmHOX2a(1) ------------>CBF <---------MYB52(1)    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxx xxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(i)<- --->DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxx   gagaggatagtagacaaacaaaaacaatggacgtcatccattatgcctctttgtttcttggggatgaagccgtctgatgtcaatgcctatgatagagctg  18275900                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                          ---------->DOF2                                                         xxxxxxxxxxxxxxxx>smallRNA(i)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                        xxxxxxxxxxxxxxxx>smallRNA(i)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxx      ---------->DOF2                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <--------   <------NtERF2                                       --------->ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------DEAR3(1)                                    --------->ANAC58<------ZmHOX2a(1)    <-------- -------->RAP2.6(3)                                  <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ZAT6----- ---------ORA47(1)                                   ---------->DOF2 <---------TOE2(3)xxxxxxxxxxxxxxx -------->SPL7                                    --------->TOE2(3)  <xxxxxxxxxxxxxxxxsmallRNA(i) --At4g35610                                      <-----------HVH21 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --ZAT2  --------->At4g35610               ===================================HOX2a_HOX2a  <xxxxxxxxx ->At4g35610                               <------ZmHOX2a(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ->ZAT2  <xxxxxxxxxxxxxxxxsmallRNA(i)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->ETT(1)<-------- xxxxxxxxx>smallRNA(i)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ANAC46<-------- -----ZmHOX2a(1)              --------->DAG2     <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ARR14(2)xxxx xxxsmallRNA(fl3)            ---------->DOF2   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxx   aggacggcgaaagctcaaaaatccagtctcaaaaagagaaaacagatcaaatcgtcaaagcaaaggcccataaggatgtcggaaacactagtttgcctga  18276000                 --------->GLK1(2)                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 <---------ARR14(2)                 --------->ARR14(2)                <xxxxxxxxxxxxxxxxsmallRNA(i)                --------->GLK1(1)                <---------GLK1(1)             <------NtERF2            <---------RAP2.6(3)            ------>NtERF2            --------->LBD16           --------->ATERF1(2)           --------->RAP2.3(2)           <---------ATERF1(2)           --------->RAP2.3(3)     xxxxxxxxxxxxxxxx>smallRNA(i)      --------->ANAC58    <---------At4g35610                --------->ANAC58 xxxxxxxxxxxxx>smallRNA(fl3)       --------->ANAC58                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) -ANAC46   --------->RAP2.6(2)     --------->ANAC46               <---------YAB1 -ANAC58  --------->ATERF1(1)      --------->ANAC58           <-------GAMYB ----->DOF2--------->DEAR3(1)     --------->WOX13(1)         <---------MYB46(3)          xxxxxxxxxxxx xxxxxxxx>smallRNA(fl3)         <------ZmHOX2a(2)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxsmallRNA(i)   --------->DOF5.7(2)               xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         -- -ANAC58  <---------LBD16--------->At4g35610            <---------ANAC46            <---------ANAC46x -AtLEC2 <---------At4g35610   --------->ARR11(3)       <---------ANAC58      <-------MYC3      <---- xxxxxxxxxxxx>smallRNA(i)<---------At4g35610            <---------ANAC58  <------ZmHOX2a(2)   ------- xxxxxxx>smallRNA(s2) <---------MYB52(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)------->MYC3--------->ZAT6   aagtccagttgagccggcaaatccgttatctgagatcaagcaagaaccagaaaaacttccttgtggttatgaatggatcacatgcgacttgaacactgat  18276100                                     --------->ARR14(2)                                     <---------ARR14(2)                                     --------->ARR14(3)                                     <---------ARR14(3)                                     --------->ARR11(3)                                     <---------ARR11(3)                            --------->ANAC58             --------->ALFIN1        --------->AHL20(1)      <---------ZAT14       --------->ANAC58 xxxxxxxxxxx>smallRNA(i2)   --------->ANAC46 ------->CCA1(2)<---------------------WRI1           ---------->DOF2 xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------AHL20(1)      <---------TOE2(3)                      < -----YAB1   <---------ANAC46       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         <--- -->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------------------WRI1--------->MYB46(3)<-------TEIL   gatatgtgttcagaggtgtgcaaatttctcaaggaacaatatcttgttgacggacaaaagttcaaggatgctcttcaacaacttgcgctagatgatacat  18276200                                                                        --------->ATHB51             <---------YAB1                                             <---------ICU4           <---------ICU4                                               -------->ATHB1           --------->YAB1                                               --------->ATHB12       <-----   <------MYB83<---------AHL20(2)                                       <--------HAHB4         <-----   <------MYB46(1)                                                     --------->ICU4          <-----  <---------AtMYB61  <---------ANAC58                           <----------DOF2               ------- ---------MYB52(1)   <---------ANAC58     <----------DOF2    <-----------GT1      ----------->GT1  <- ----TEIL <---------YAB1                  <---------DAG2 <---------AHL20(2)   <------ZmHOX2a(1)<-----   tcgtttggttttattattattttgcttcttctctatatgaactacttttcccatgcgatttttttacttttgaattattaggaagtgtgattttgttact  18276300                                                                                ------>ZmHOX2a(2)                                                                               --------->GLK1(1)                                                                              --------->ARR14(2)                                                                              <---------ARR11(3)     <-----------HVH21                                                        --------->ARR11(3)  <---------ANAC46                                                  <---------WOX13(1)  --------->ARR11(3) ----ANAC58                                                       --------->ATHB51      <---------ARR11(3) ----ANAC58                                                      --------->ICU4<------ZmHOX2a(2) ----ANAC46                --------->GLK1(2)                     <---------YAB1<---------GLK1(1) -->MYB52(2) <---------AHL20(2)                          <---------REM1(1)    <---------ARR14(2) ----------RAV1(1)    --------->YAB1              --------->At4g35610        <------ZmHOX2a(1) ----ANAC55(1)   --------->AHL20(2)      --------->AHL20(2) ------->TEIL<---------REM1(1)     <------   tgtgttgtgtcatatataaaaaaatcaaaattctataacagaataaaaaataagctaacatgtagctataattgatgaaggatcccctaagctcttatac  18276400  Previous    Next  AGI:  At2g44175.1    Description:  N-myristoyltransferase-related. similar to NMT1 (N-MYRISTOYLTRANSFERASE 1) [Arabidopsis thaliana] (TAIR:AT5G57020.1); similar to N-myristoyl transferase [Brassica oleracea] (GB:AAF19802.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Myristoyl-CoA:protein N-myristoyltransferase; (InterPro:IPR000903) Range:  from: 18275864    to: 18276290    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g44180.1    Description:  MAP2A (METHIONINE AMINOPEPTIDASE 2A); methionyl aminopeptidase. Identical to Methionine aminopeptidase 2A (MAP2A) [Arabidopsis Thaliana] (GB:Q9FV49;GB:O80587); similar to MAP2B (METHIONINE AMINOPEPTIDASE 2B), methionyl aminopeptidase [Arabidopsis thaliana] (TAIR:AT3G59990.2); similar to MAP2B (METHIONINE AMINOPEPTIDASE 2B), methionyl aminopeptidase [Arabidopsis thaliana] (TAIR:AT3G59990.3); similar to MAP2B (METHIONINE AMINOPEPTIDASE 2B), methionyl aminopeptidase [Arabidopsis thaliana] (TAIR:AT3G59990.1); similar to hypothetical protein OsI_037943 [Oryza sativa (indica cultivar-group)] (GB:EAY83984.1); similar to methionine aminopeptidase 2 Range:  from: 18276319    to: 18278936    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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