Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------YAB1                               <---------MYB52(1)                          --------->AHL20(2)                              <-------GAMYB                                <---------AHL20(2)                          <---------ALFIN1                              --------->AHL20(1)         <- -----ARR14(2)      ------->TEIL   <---------YAB1                       --------->AHL20(2)         -- ---->ARR14(2)   <---------ATHB12--------->YAB1                         <---------ARR11(3)        <--   tactcatccaaaattccaaatgaatcttccaccgttgataattctattccattgttttcttctgtagaagaccatatattattaagtctctagtccattg  17142400                                                                                  <---------TOE2(3)                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->YAB1                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       --------->AHL20(1)                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                       --------->YAB1           ------------------------>ANAC81  >>>>>>>>>TBF1                  --------->AHL20(2)      ----------->GT1                    >>>>>>>>>TBF1                   --------->AHL20(2)  <---------AHL20(2)                ------------------------>ANAC81     --------->YAB1 --------->AHL20(2)xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               --------->ANAC58 <---------ATHB12------------------------>ANAC81             <---------AHL20(2)<---------AHL20(2) --------------AGL15              ---------->DOF2---------->DOF2    --------->ANAC58  ------->TEIL ------------->AGL15          ------------------------>ANAC81--------->AHL20(2)<---------YAB1 ---------------AGL3xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      --------->AHL20(2)--------->TOE2(3) <----   tcaataaatggaaatacaaaaaaaaaaaaaaaaaaaaaaagaagaagaagaaaaagacagcatttaatgaacgaaaataatattaatgaatttggaagaa  17142500           ----------->GT1        ------>MYB46(1)        ------>MYB83       --------->MYB52(1)      --------->TOE2(2)      --------->TOE1(2)     <---------MYB55(2)     --------->AHL20(2)     --------->MYB46(3)     <---------AHL20(2)     <---------MYB52(2)     --------->AHL20(1)     --------->DEAR3(2)    --------->AHL20(2)    ------->TEIL           <---------ATHB51          --------->ZAT18                           <----- --------->MYB46(3)        --------->ICU4            <---------ZAT18                       <---------MYB52(1) --------->ANAC58          <---------AHL20(2)     <------MYB46(1)                         <-------GAMYB --------->ANAC58      ------->GAMYB              <------MYB83               <---------ATHB12-------- <---------MYB52(2)   --------->ANAC46        --------->ATHB12     ---------->DOF2     <---------At5g28300 -----------AtSPL8  --------->MYB52(1)  <---------REM1(1)   --------->MYB46(3)       <---------ZAT14   ggaacgaaccaacgagaaaaatcaacgaaataatttagacaaatgtagcgattggtccactacccatccaaaagtccaaatgaatacttcaccgttgata  17142600                                                                                               ------                                   --------->AHL20(2)                                         -------                                   <---------AHL20(2)                         <---------AHL20(2)                                   <---------YAB1                             --------->AHL20(2)     <---------AHL20(2)         --------->AHL20(2)           <---------AHL20(2)    ----------->GT1 ----YAB1                       --------->AHL20(1)           --------->AHL20(2)<---------AHL20(2)  -- ->YAB1                         <---------ARR11(3)     ----------->GT1 <----------DOF2 --------------   attctattcaattgttttcttctgtagaagaccatatattattaagtctctagtccattgtaaataaatgtttctttcaaataaatggaaatacaaaaaa  17142700                                                             ----------->GT1                                                             <---------ZAT6                                                          --------->YAB1                                                       --------->WOX13(1)                                                      --------------->AGL15                                                      <---------------AGL15                                                     ------------>CBF                                                     <---------ATHB12                                                     --------->MYB46(3)                                 --------->ATHB12    ----------------->AGL3                           --------->YAB1            ----------------->AGL2                        --------->YAB1              --------->ANAC58                        <---------ICU4              -------->P    --------->MYB46(3)               --                        -------->HAHB4              ------>MYB83  <---------MYB52(2)        ---------                       <---------ATHB12             --------->ANAC58            ------>NtERF2      *TSS        ---------->DOF2--------->ICU4               ------>MYB46(1)           --------->ATERF1(1)  <- ----------->GT1      <---------TOE2(3)           <---------MYB111(1)         <------NtERF2 --------- ------------------>ANAC81<---------YAB1          --------->AtMYB61          <---------ATERF1(1)===== --->DOF2           --------->AHL20(2)           --------->DEAR3(2)         <---------DEAR3(1)  ----- -------->DOF2      <---------AHL20(2)           <---------MYB52(2)    --------->TOE2(2)  =========== ---------->ANAC81 --------->AHL20(2)            --------->MYB46(3)    --------->TOE1(2)  ---------->DOF2   gaaaagaaaaaaaagacagcatttaatgatgataacgatttggaagaaggaaccaaccaattagagtaacaaaccaaggaggcgactcacatgaaagcaa  17142800    <---------bZIP60(2)    <---------O2    =====================================bZIP_DOF    <---------TGA1a ----------->HVH21 ------->At4g35610 >ANAC58 --------At4g35610 >ANAC58                                                                                 --------->AHL20(2) =============bZIP_DOF                                                                  --------->AHL20(2) ----->DOF2--------->At5g28300                                                    XXXXXXXXXXXXXXXXXXX =============bZIP_DOF        ---------->DOF2<------NtERF2                  --------->YAB1   <<<<<<<<   aagctgacatggcagtgaattcagttttataaaaaaggcttcaaggccgagagttcgtagtacaaactcttctctcagtcatcacagaaaataaaaaaca  17142900                                                        <----------ID1                                                        --------->ANAC46                                                        --------->ANAC58                                                        --------->ANAC58          --------->ZAT18                            --------->ARR14(2)          <---------ZAT18                            <---------ARR14(2)          <---------ZAT14<---------GLK1(1)        <---------ANAC46 <---------ANAC46  ----------->RAV1(1)           <---------At4g35610                            ===== >MIR157D --------->ZAT14--------->GLK1(1)    <---------ZAT14                ----------->GT1    ===== <<<<<<<<<LFY      --------->MYB52(1)         --------->ZAT14     --------->YAB1<-------TEIL    -----   atggcgaataagttcactagacaacagatttcagagtttagggaacagttcagcgtatacgacaagaatggtgatggtatggttcatcgtctctattcct  17143000                                                                                                   <-                                                                                                   <-                              ---------->DOF2                                                      <-                  ------>ZmHOX2a(1)                                                                <-                ------>ZmHOX2a(2)                                                                 ---               <------ZmHOX2a(2)                                                                  ---              --------->ARR11(3)                                                                  ---              <---------ARR14(2)                                           <------MYB83           <-- --------------->AtSPL3--------->YAB1                                      <------MYB46(1)       <--- ======================HOX2a_HOX2a                         ------>ZmHOX2a(1)<-----------HVH21  <----- =====================HOX2a_HOX2a                 --------->ZAT6         <--------P          <------ZmHOX2a(1) ->ZmHOX2a(1) --------->ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR161.2--------->ATHB12         ----------->RAV1(1)   ctaatcgtacatattggatcctgaatcatcttcaaagcactgaaaatgactaacacaagtccttgattacttcttgtaggtcacattaccacagaggagt  17143100           <---------ANAC58      ----------->HVH21      <---------MYB52(1)     <---------RAP2.6(3)    <---------ANAC55(2)    <---------ANAC46    <---------ANAC55(1)    --------->ANAC55(2)    <---------ANAC58    <---------ANAC58   <------NtERF2  ------>NtERF2                                                                      <---------ARR14(2)  --------->ABI4(2)                                     --------->ARR11(3)           --------->ARR14(2) --------ANAC58                                         <---------ARR11(3)        --------->ANAC58 -----MYB46(1)                                    ==============HOX2a_HOX2a       <---------bZIP60(1) -----MYB83<---------ANAC58                <---------At4g35610                    --------->ANAC55(2) --------ANAC58                       --------->At4g35610      --------->ARR11(1) --------->ANAC58 ------>MYB52(2)                      <---------ZAT2   --------->GLK1(1)          <---------ANAC55(2) ------>MYB46(2)                      <---------At4g35610<------ZmHOX2a(2)     ----------->HVH21 ------>MYB59                         --------->ZAT2 <------ZmHOX2a(1)         ----------->TGA1 -------DEAR3(1)              ----------->HVH21   <------ZmHOX2a(1)  --------->ARR14(2) ------ZAT14                ----------->RAV1(2)<-----------RAV1(2)   <---------ARR14(2)--------->MYB46(3) ----GLK1(1)              <-----------GT1  --------->At4g35610 <---------ARR14(2) --------->bZIP60(1)   tcggtgccgtgatgcgttccctcggtttaaacctgacccaagctgagcttcaggaggagatcaacgattcggatttagatggtgacggaaccatcaattt  17143200             --------->ZAT18                                                                        <            --------->ANAC46                             <---------GLK1(1)                       ----            --------->ANAC58                            --------->ARR11(3)                       <---            --------->ANAC58                        ---------->DOF2                              ----           --------->ZAT18                        --------->ANAC58                               <---           <---------ZAT18                        --------->ANAC58                             <-----      <---------ANAC58                      --------->ARR11(3)       ----------->HVH21      <--------      <---------ANAC58                  ---------->DOF2 <---------ARR11(3)                  ---------    --------->ARR11(3)   <------ZmHOX2a(1)  <---------ARR11(3)     <----------DOF2   ----------->GT1-   cactgagttcttgtgcgcaatggctaaggacacttactctgagaaagacctcaagaaagatttcagactctttgacatagacaagaatggtttcatctca  17143300  Previous    Next  AGI:  At2g41090.1    Description:  calmodulin-like calcium-binding protein, 22 kDa (CaBP-22). Identical to 22 kDa calmodulin-like calcium-binding protein [Arabidopsis Thaliana] (GB:P30187); similar to CAM5 (CALMODULIN 5), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.3); similar to calmodulin [Aegiceras corniculatum] (GB:ABG74924.1); similar to calmodulin [Aegiceras corniculatum] (GB:AAX31386.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 17142799    to: 17143930    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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