Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------AHL20(1)                <-----------GT1                  --------->AHL20(1)          <---------TOE2(3)      <---------TOE1(3)    <---------AHL20(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <------ZmHOX2a(1) --------->AHL20(2)     ---------->DOF2          --------->AHL20(2)       ----------->GT1 <---------AHL20(2) --------->At5g28300          <---------AHL20(2)     <------ZmHOX2a(1) ---------AHL20(2) ----------->GT1     <---------YAB1             --------->REM1(2)                -- -------->AHL20(2)--------->ZAT6 <---------TOE2(3)               --------->ALFIN1           ---------   tattaatttatggaggtttaactgtaaaaagagttgaggttaccattgcaataaaatatgagacaatgtgtagaggaggataaaagattgaacaaaaaga  16582400                                          --------->ANAC58                                          --------->AtLEC2                                     ------->MYC2                                     ------->MYC3       <---------ALFIN1                                     <-------MYC2       --------->AtMYB61                                     <-------MYC3 --------->ANAC58           <---------ICU4 --------->ANAC58              <-----------GT1    --------->ANAC58 --------->YAB1 --------->ANAC58       --------->YAB1  <---------AtLEC2------->GAMYB<---------YAB1                 - -------->DOF2          <------ZmHOX2a(1) --------->ANAC58       <---------ARR11(3)                -- ->DOF2                ----------->GT1 <-------TEIL    --------->MYB46(3)--------->AHL20(2)        --   agaaagccaactagtttttgtcaaaaggataattttccatgtgcatgcaagtatgcaaccacatcaaaatcataaataaacattgtctaaaatgtttcta  16582500                                                                  --------->MYB46(3)                                                      <-----------GT1                                                  <---------RVE1(1)                                --           ---------->DOF2                        <---------CCA1(1)                          -------- -------->AHL20(2)                               --------->ARR11(3)               <---------AHL20(2) ------->YAB1----------->GT1  --------->YAB1     <---------ARR11(3)      --------->YAB1    <--------- ------->AHL20(2)   <-------TEIL      <---------TOE2(3)          -------->P      --------->AHL20(2)<-   ataaaaatagatgtaaagaaaattcatcagtttaataactagggtttaagagatatttacaaatactaaccattaacatcatatttaatatgactttgta  16582600                                         <---------AHL20(2)                           <---------AHL20(2)                           --------->AHL20(2)                        --------->AHL20(2)            <---------ARR11(3)                        <---------AHL20(2)            <---------AHL20(1)                       --------->AHL20(2)<---------AHL20(1)            <-----------GT1     --------->YAB1    <---------AHL20(2)--------->AHL20(2)         <---------ARR11(3)    <---------YAB1     <---------AHL20(1)--------->AHL20(1)   <---------WOX13(1) ------->ARR11(3)--------->ANAC58       <---------AHL20(2)  --------->ATHB12  --------->AHL20(2) --->GT1         --------->ANAC58       --------->AHL20(2) <---------AHL20(2) <---------AHL20(2) -DOF2           --------->ANAC46<---------ANAC55(2)  --------->AHL20(1)    <----------DOF2 --------ARR11(3)--------->AtLEC2----------->GT1--------->TOE2(3)   --------->ARR11(3)   aaatctatgatcaaataacatgcaatttttttaatatgtaaaataaattatctcaaaatatttgattgaatatataccctttaatttagcattgatttta  16582700                                                              --------->bZIP60(2)                                                              <---------bZIP60(1)                                    <---------YAB1        <-----------HVH21  --------->AHL20(1)                                 <---------TOE2(3) ---------->DOF2           <---------AHL20(2)                                --------->YAB1 ------>ZmHOX2a(1)             --------->AHL20(2)                                <---------ICU4<---------------AGL15      <---------AHL20(2)                               --------->ICU4 --------------->AGL15   --------->TOE2(3)                             --------->YAB1  ----------------->AGL3  --------->YAB1    ---------->DOF2                          ----------->GT1<---------MYB46(3)   --------->bZIP60(1) --------->AHL20(2)                    <---------AHL20(1)<------------CBF   ----------->GT1--------->AHL20(2)    -------   aaaatccaacaattttctatagtatattttgtaataatgttattggttcctaaaaaagatggtcacatcattcattaaataaaatgaaataaagaagtgt  16582800                                                                                                   <-                                ------>MYB83                                                    <----                                ------>MYB46(1)                                                 <----                      --------->DAG2                                                            <----                --------->AHL20(2)                                        --------->ARR11(3)    <----         <------------CBF     *TSS                               ----------->GT1                <----     ---------->ID1  ---------->DOF2        <---------YAB1     --------->ZAT18                 <----- -->ALFIN1      <---------AHL20(2)       <----------DOF2----------->RAV1(2)     --------->LBD16------   ttccttcgtcgcattgaataaaataaagtaaaccttccaaagacttttcattgtcttcgcctgcgagcgctaaaattatctccgagcattctcaagttgg  16582900        <---------ANAC55(2)        --------->ANAC55(2)        --------->ANAC58       --------->SPL1(2)       --------->SPL7     <---------SPL7   --------->MYB59   <---------------AtSPL8   <---------------AtSPL3 --------MYB46(3)                                                                                  -- --MYB46(1)                                                                                        <- -----ANAC58                                                                                  ------- -----ANAC58                                                 <---------ANAC58                -------- --MYB83--------->ANAC58   ----------->GT1          --------->GLK1(2)                        <------- -----ANAC46     --------->ATHB12                  <---------GLK1(2)   <---------TOE2(3)     -------- ----MYB46(3)   <---------------AGL15            ----------->ARR10   ---------->DOF2   ------>ZmHOX2a(1) --->MYB55(2)  <-----------------AGL2  --------->ATHB12      <---------ANAC58     <---------At4g35610   gtgattcggtacggattactgatttgggagagaaaaaccctagattggaattagattctgggttcttgggctaaaggtttcttcatctccttcgaatcat  16583000         <---------ZAT14 ---->ZmHOX2a(1)                                     <------ZmHOX2a(1) ---------DOF2                                <---------YAB1 -->YAB1 --------->ZAT18                      --------->AHL20(2)       <---------ANAC46 ->HSFB2a(1)     ----------->GT1           <----------DOF2     <---------TOE1(3)              ------- --ATHB12--------->ZAT14       --------->ZAT14<---------AHL20(2)     <---------ANAC46        <------- ->HSFC1(2)   <---------MYB46(3)       <---------GLK1(2)       <---------TOE2(3)  <-----------GT1   ccttttgtaagtccagtggatgtgaaaacccagtactcactgattctttttattaggaattttgtaaggttttgggtagagttttcacagttttgatgat  16583100                    <---------HSFB2a(2)           <---------ALFIN1                   <---------ZAT6                         --------->GLK1(1)         --------->PCF5                 <----------DOF2                              <---------GLK1(1)         <---------PCF2                <---------ANAC46                              --------->CCA1(2)        <---------PCF5                 <---------ANAC58                             --------->ARR11(3)      --------->ALFIN1                 <---------ANAC58                             <---------ARR11(3)    <-----------RAV1(1)          --------->ARR11(3)           <----------DOF2     --------->ANAC58 -->YAB1<---------TCP23          --------->GLK1(2)      <---------MYB46(3)        --------->ANAC58 --YAB1 ----------->TCP11(1)    <---------GLK1(2)   <---------TOE2(3)        --------->ZAT18        -   actaaaatgtgggccactgggtctagagaatgaagaatcttgcttttagtgacaaaggttgttcctttggagtagtaagtgagcaagatatcagaaaaac  16583200                                                                                                    <                                                           <---------ANAC58                       <--                                 <---------ANAC58          <---------ANAC58                       <--                                 <---------ANAC58          <---------AtLEC2                       <--                           <---------WOX13(1)         <-----------RAV1(1)                         <--                         --------->ATHB12       <---------ZAT6                                    <--                        <---------YAB1       ------>ZmHOX2a(1)                                   ----   <----------DOF2    <----------DOF2       <---------ANAC58                                     <---  --------->TOE2(3)<-----------GT1          <---------ANAC58               <---------TOE2(3)     <--- ------>TEIL       <---------AHL20(2) --------->ZAT14<---------YAB1    <----------DOF2           ----   tgaacctttaatctcaagaatttactttgattggagcttgtgaagtccttgtgttattgttgcatgatgttttctttgagataacttggcaatgtgtgtt  16583300  Previous    Next  AGI:  At2g39740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69145.1); contains domain SSF81631 (SSF81631); contains domain PTHR12271:SF13 (PTHR12271:SF13); contains domain PTHR12271 (PTHR12271); contains domain SSF81301 (SSF81301) Range:  from: 16582830    to: 16586198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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