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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(1)
<-----------
GT1
<---------
AHL20(1)
<---------
TOE2(3)
<---------
TOE1(3)
<---------
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<------
ZmHOX2a(1)
--------->
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
--------->
At5g28300
<---------
AHL20(2)
<------
ZmHOX2a(1)
---------
AHL20(2)
----------->
GT1
<---------
YAB1
--------->
REM1(2)
--
-------->
AHL20(2)
--------->
ZAT6
<---------
TOE2(3)
--------->
ALFIN1
---------
tattaatttatggaggtttaactgtaaaaagagttgaggttaccattgcaataaaatatgagacaatgtgtagaggaggataaaagattgaacaaaaaga
16582400
--------->
ANAC58
--------->
ANAC58
------->
MYC2
------->
MYC3
<---------
ALFIN1
<-------
MYC2
------->
GAMYB
<-------
MYC3
--------->
ANAC58
<---------
YAB1
--------->
ANAC58
<-----------
GT1
--------->
ANAC58
--------->
YAB1
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
AtLEC2
<---------
ARR11(3)
-
-------->
DOF2
--------->
YAB1
<---------
AtLEC2
--------->
AtMYB61
<---------
ICU4
--
->
DOF2
----------->
GT1
<-------
TEIL
--------->
MYB46(3)
--------->
AHL20(2)
--
agaaagccaactagtttttgtcaaaaggataattttccatgtgcatgcaagtatgcaaccacatcaaaatcataaataaacattgtctaaaatgtttcta
16582500
--------->
MYB46(3)
<-----------
GT1
<---------
RVE1(1)
<-
---------->
DOF2
<---------
CCA1(1)
--------
-------->
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
------->
AHL20(2)
<-------
TEIL
<---------
TOE2(3)
-------->
P
--------->
AHL20(2)
--
------->
YAB1
----------->
GT1
--------->
YAB1
--------->
ARR11(3)
--------->
YAB1
<---------
ataaaaatagatgtaaagaaaattcatcagtttaataactagggtttaagagatatttacaaatactaaccattaacatcatatttaatatgactttgta
16582600
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
ARR11(3)
<---------
YAB1
<---------
AHL20(1)
--------->
AHL20(1)
<---------
WOX13(1)
--------
ARR11(3)
--------->
ANAC58
<---------
AHL20(2)
--------->
ATHB12
--------->
AHL20(2)
--->
GT1
--------->
AtLEC2
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
------->
ARR11(3)
--------->
ANAC46
----------->
GT1
--------->
TOE2(3)
<---------
ARR11(3)
-
DOF2
--------->
ANAC58
<---------
ANAC55(2)
<---------
ARR11(3)
<----------
DOF2
aaatctatgatcaaataacatgcaatttttttaatatgtaaaataaattatctcaaaatatttgattgaatatataccctttaatttagcattgatttta
16582700
--------->
bZIP60(2)
<---------
bZIP60(1)
<---------
YAB1
<-----------
HVH21
<---------
AHL20(2)
<---------
TOE2(3)
---------->
DOF2
--------->
AHL20(1)
--------->
YAB1
------>
ZmHOX2a(1)
--------->
AHL20(2)
<---------
ICU4
<---------------
AGL15
<---------
AHL20(2)
--------->
ICU4
--------------->
AGL15
--------->
TOE2(3)
--------->
YAB1
----------------->
AGL3
--------->
YAB1
---------->
DOF2
----------->
GT1
<---------
MYB46(3)
--------->
bZIP60(1)
--------->
AHL20(2)
<---------
AHL20(1)
<------------
CBF
----------->
GT1
--------->
AHL20(2)
-------
aaaatccaacaattttctatagtatattttgtaataatgttattggttcctaaaaaagatggtcacatcattcattaaataaaatgaaataaagaagtgt
16582800
<-
------>
MYB83
<----
------>
MYB46(1)
<----
--------->
DAG2
<----
<---------
AHL20(2)
--------->
ARR11(3)
<----
<------------
CBF
*
TSS
----------->
GT1
<----
---------->
ID1
---------->
DOF2
<---------
YAB1
--------->
ZAT18
------
-->
ALFIN1
--------->
AHL20(2)
<----------
DOF2
----------->
RAV1(2)
--------->
LBD16
<-----
ttccttcgtcgcattgaataaaataaagt
aaaccttccaaagacttttcattgtcttcgcctgcgagcgctaaaattatctccgagcattctcaagttgg
16582900
--------->
ANAC58
--------->
ANAC58
<---------
ANAC55(2)
--------->
SPL1(2)
--------->
SPL7
<---------
SPL7
--------->
MYB59
<---------------
AtSPL8
<---------------
AtSPL3
--------
MYB46(3)
<-
-----
ANAC58
--
--
MYB46(1)
-------
--
MYB83
--------->
ANAC55(2)
<---------
ANAC58
--------
-----
ANAC58
----------->
GT1
--------->
GLK1(2)
<-------
-----
ANAC46
--------->
ATHB12
<---------
GLK1(2)
<---------
TOE2(3)
--------
--->
MYB55(2)
<---------------
AGL15
----------->
ARR10
---------->
DOF2
------>
ZmHOX2a(1)
----
MYB46(3)
<-----------------
AGL2
--------->
ATHB12
<---------
ANAC58
<---------
At4g35610
gtgattcggtacggattactgatttgggagagaaaaaccctagattggaattagattctgggttcttgggctaaaggtttcttcatctccttcgaatcat
16583000
--------->
ZAT18
---------
DOF2
<------
ZmHOX2a(1)
---->
ZmHOX2a(1)
<---------
YAB1
-->
YAB1
--------->
ZAT14
--------->
AHL20(2)
<---------
ANAC46
->
HSFB2a(1)
----------->
GT1
<----------
DOF2
<---------
TOE1(3)
-------
--
ATHB12
<---------
ZAT14
--------->
ZAT14
<---------
AHL20(2)
<---------
ANAC46
<-------
->
HSFC1(2)
<---------
MYB46(3)
<---------
GLK1(2)
<---------
TOE2(3)
<-----------
GT1
cctttt
gtaagtccagtggatgtgaaaacccagtactcactgattctttttattaggaattttgtaaggttttgggtagagttttcacagttttgatgat
16583100
<---------
HSFB2a(2)
<---------
ALFIN1
<---------
ZAT6
--------->
GLK1(1)
<---------
PCF2
<----------
DOF2
<---------
GLK1(1)
--------->
PCF5
<---------
ANAC58
--------->
CCA1(2)
----------->
TCP11(1)
<---------
ANAC46
--------->
ARR11(3)
--------->
ALFIN1
<---------
ANAC58
<---------
ARR11(3)
<-----------
RAV1(1)
--------->
ARR11(3)
<----------
DOF2
--------->
ANAC58
-->
YAB1
<---------
TCP23
--------->
GLK1(2)
<---------
MYB46(3)
--------->
ANAC58
--
YAB1
<---------
PCF5
<---------
GLK1(2)
<---------
TOE2(3)
--------->
ZAT18
-
actaaaatgtgggccactgggtctagagaatgaagaatcttgcttttagtgacaaaggttgttcctttggagtagtaagtgagcaagatatcagaaaaac
16583200
<
<---------
ANAC58
<--
<---------
ANAC58
<---------
AtLEC2
<--
<---------
ANAC58
<---------
ANAC58
<--
<---------
WOX13(1)
<-----------
RAV1(1)
<--
--------->
ATHB12
<---------
ZAT6
<--
<---------
YAB1
------>
ZmHOX2a(1)
----
<----------
DOF2
<----------
DOF2
<---------
ANAC58
<---
--------->
TOE2(3)
<-----------
GT1
<---------
ANAC58
<---------
TOE2(3)
<---
------>
TEIL
<---------
AHL20(2)
--------->
ZAT14
<---------
YAB1
<----------
DOF2
----
tgaacctttaatctcaagaatttactttgattggagcttgtgaagtccttgtgttattgttgcatgatgttttctttgagataacttggcaatgtgtgtt
16583300
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AGI:
At2g39740.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69145.1); contains domain SSF81631 (SSF81631); contains domain PTHR12271:SF13 (PTHR12271:SF13); contains domain PTHR12271 (PTHR12271); contains domain SSF81301 (SSF81301)
Range:
from: 16582830
to: 16586198
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.