Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                       ------>ZmHOX2a(2)      ----------->GT1                              --------->TOE1(3)                   --------->ICU4         ---------->DOF2                                  --------->TOE1(2)    --------->AtLEC2--------->ATHB12<---------MYB52(1)                                     --------->TOE2(2) --------->WRKY18(1)-------->HAHB4<---------ANAC58                                         --------->TOE2(3) ---YAB1           <---------YAB1 <---------ANAC58         <---------ATHB12          --------->YAB1<- >YAB1             <---------ATHB12--------->TOE2(3) <-----------GT1                <---------ATHB12   ttggtcatccaaaattttctaatgatcgggctaatttcgttagcaaaagagttatatactaatcaactacatataagaacgtccaaatcaaaacctaagc  14146500                                                                -------->ATHB1   ------>ZmHOX2a(2)                                                                <------------ATHB5                                                                <--------ATHB1 <-----------ARR10                                                                --------->YAB1 --------->AGP1                                                                --------->ATHB12<------ZmHOX2a(2)                                              --------->DAG2    <---------ICU4 <---------AGP1                                             ---------->DOF2    --------->ATHB51--------->CCA1(2)                                        --------->TOE2(3)      --------->ICU4  --------->ARR11(3)                     --------->REM1(1) --------->YAB1          <---------ATHB12<---------ARR11(3)   ------->TEIL   --------->ANAC46    <---------TOE2(3)        <---------ATHB51<---------ARR14(2) ----->MYC3   <------ZmHOX2a(2)       <---------YAB1<---------HSFB2a(2)        --------->ARR14(2) --- ------MYC3  --------->ARR14(2)     --------->YAB1  --------->HSFB2a(2) ---------->DOF2           <--   acatgaatttgaatcgatccactacatcatccatacaattaacataaaaaagttctaaaaaatcaataattgaaaaaagaagatctaatgaaaaaaaaaa  14146600                       ---------->DOF2                   --------->AHL20(2)                  <---------AHL20(2)               --------->AHL20(1)               <---------AHL20(1)               <---------AHL20(2)              <---------AHL20(2)          --------->AHL20(2)                                                                     ----          <---------AHL20(2)                 ----------->GT1                                     <---          --------->AHL20(1)  ---------->DOF2<---------ZAT6                                      <---    --------->YAB1--------->AHL20(2)       ----------->GT1  --------->AHL20(2)            <---------ICU4  <---------TOE2(3)<---------AHL20(2) --------->AHL20(2)  ----------->GT1                 --------->YAB1 ------>TOE2(3)--------->AHL20(2)   ----------->GT1      --------->DAG2            ----------->GT1 --------DOF2 --------->AHL20(2)  ---------->DOF2       ---------->DOF2      --------->ALFIN1 -------   ctttaatgaaaataaaataaattaataaagaataaagaaagaaaatagtgaaaatagaaaaagtaaatagtagaagaaaatgggggagttaataatgtgg  14146700                                                                           <----------DOF2                                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                   ------>NtERF2        ------>MYB83 ----->ZAT18                                       ----------->RAV1(1)  ------>MYB46(1) ------PCF2                               <----------DOF2       <---------ICU4 ------ZAT18   --------->At5g28300        <---------DAG2        --------->ZAT6<---------YAB1 -->ALFIN1    ----------->GT1          ------>ZmHOX2a(1) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   gcactagtctctgaaacagtaacttctactactaaaaactcctgctttttcgccaacaagtagccatcactaccttccttttgattccctctctctctct  14146800              --------->ZAT14              <---------ZAT18            <---------At4g35610            --------->At4g35610            --------->ZAT2            <---------ZAT2          <---------ALFIN1          --------->MYB46(3)       --------->ANAC46      --------->MYB46(3)      --------->ZAT18    <---------ZAT18                                                                              ----    --------->PCF2                    <----------DOF2                                         ------- <---------ANAC58                  <---------ALFIN1                  ----------->HVH21        ------- ------>ZmHOX2a(2)            --------->ARR14(2)         <---------CCA1(2)                    ------- =================================HOX2a_HOX2a        --------->TOE2(3)               ---------->DOF2 <---------ANAC58          ------>ZmHOX2a(1)         --------->TOE1(3)    *TSS  ----------->GT1 -----   cgatcgtgcccaccagctcactcaccctcctaaatccacactttaaactaaaaaaccctaaatctcgagccttgacacaagagagaaaaaagaaacacac  14146900                <------NtERF2               --------->ANAC58               --------->ANAC58                                           --------->ANAC58             --------->TCP16(2)                                           --------->ANAC46            --------->TCP15(1)                                          --------->ANAC58            --------->TCP20                                             --------->ANAC58            <---------TCP16(1)                                      <---------ALFIN1            <---------ARR14(2)                                     --------->ZAT14            <---------PCF5                                        <---------ALFIN1            <---------PCF2                                   <-----------HVH21         --------->ALFIN1              ------>ZmHOX2a(1)  =====================================bZIP_DOF  ---------->DOF2  --------------------->WRI1             --------->O2  --------->ANAC46 ------->RAV1(1)--------->LBD16       --------->TOE2(3)   --------->ANAC55(2) -->ANAC58 <------MYB83         <---------YAB1            <---------O2  <---------ALFIN1 -->ANAC58 <------MYB46(1) <---------ICU4                 <---------TGA1a --------->ANAC58     ------ -->ANAC46<---------MYB46(3)  --------->YAB1              <---------ANAC55(2)       ---------->DOF2<- ---->ANAC46--------->ARR14(2)<-----------GT1  <---------ZAT18 <-----------GT1   --------->YAB1<-----   aacacaaagaagtgggtccgcatttgtaagaatcaccattccttagtagtggccatagtcaagtgtcaccacacacacaccaaaaataaagacgttcctt  14147000                                                 <----------DOF2                                              ------->TEIL              <----------DOF2                                           <---------ANAC58         <---------CCA1(2)                                           <---------ANAC58    -------->P                    --------        ---------->ID1                    <---------TOE2(3)    ------>MYB46(1)      <---------HSFB2a(2) --------------->WRI1                    <---------DOF5.7(2) --------->AtMYB61      --------->HSFB2a(2) ----------GT1                         --------->DOF5.7(2)  --------->MYB46(3)      --------->HSFC1(1) -----DOF2  --------->ATHB12   <-----------HVH21<----------DOF2------>MYB83         <---------HSFC1(1)   ttttctcttcgtctccattggtacttacttactagtcagacattaacgtgcctttgtgaaaaaccaacccatctctttccctctctctagaaacccagag  14147100                                     <---------ANAC46                                     <---------ANAC58                                     <---------ANAC58                                --------->ATHB12                                --------->ATHB51                        --------->At4g35610                                <---------ICU4                          <---------At4g35610                               <---------YAB1                        ------>ZmHOX2a(1)                               --------->ICU4              <---------ANAC58                   <----------DOF2<---------WOX13(1)       <---------ANAC58          <---------ANAC58   --------->YAB1     <------ZmHOX2a(1)    <---------At4g35610    --------- ->LBD16  <---------ANAC58  <---------ATHB12   ----------->GT1 <----------DOF2------>ZmHOX2a(1)   aagaaaactcttgcttccaagcttttcccactcataattgcttattagaaggagaaattttgcttcttttcctctgcttcctcttaacatagaagaaatt  14147200                   --------->ANAC58                   ===============================HOX2a_HOX2a                   ------>ZmHOX2a(2)                   --------->ANAC58                  <------ZmHOX2a(2)                 --------->ARR11(3)    --------->ANAC58    <---------ANAC55(2)                           <---------ANAC58                           <------MYB83    --------->ANAC58                     <---------ANAC46                                    <------MYB46(1)    --------->ANAC55(1)         <---------GLK1(2) <---------ANAC58                         <---------WOX13(1)    --------->ANAC55(2)       --------->LBD16     <---------ANAC46   <<<<<<<<<TBF1       --------->ATHB12    --------->ANAC46    --------->MYB46(3) <------ZmHOX2a(1)  <-----------GT1     --------->LBD16   <---------LBD16================================HOX2a_HOX2a <---------ICU4     <-----------RAV1(2) >ARR11(3)       <---------ARR11(3)<---------AtMYB61         <---------ATHB12  ------>ZmHOX2a(1)   ggagacacggaaggaagaagatcgcaacaatccagaattggtggaggagattgcttcgatctaatcacttcttcttccatcctccaggtatagattggtt  14147300                                          <---------PCF2                                         <---------DEAR3(2)                                   <---------ANAC46                                   <---------ANAC58            <----------DOF2                  --------->ICU4  <---------STY1(2)           <---------ANAC58    <---------ARR11(3)            --------->STY1(2)       <---------WOX13(1)    --------->ARR11(3)       <-----------GT1   <----------DOF2<---------ANAC58    --------->GLK1(2) <-----------GT1  <---------ANAC46  <---------GLK1(2)   --------->RVE1(1) <---------YAB1<---------ANAC58<-----------GT1   <-------TEIL   tttaaaaatctgttcttggagttattactagtaactagcttgtgggttcctttttactagattggctttggtacatgaagtgattcagatagagaatttt  14147400  Previous    Next  AGI:  At2g33360.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04490.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04490.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71465.1) Range:  from: 14146874    to: 14150194    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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