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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--
------>
ZmHOX2a(2)
----------->
GT1
--------->
TOE1(3)
--------->
ICU4
---------->
DOF2
--------->
TOE1(2)
--------->
AtLEC2
--------->
ATHB12
<---------
MYB52(1)
--------->
TOE2(2)
--------->
WRKY18(1)
-------->
HAHB4
<---------
ANAC58
--------->
TOE2(3)
---
YAB1
<---------
YAB1
<---------
ANAC58
<---------
ATHB12
--------->
YAB1
<-
>
YAB1
<---------
ATHB12
--------->
TOE2(3)
<-----------
GT1
<---------
ATHB12
ttggtcatccaaaattttctaatgatcgggctaatttcgttagcaaaagagttatatactaatcaactacatataagaacgtccaaatcaaaacctaagc
14146500
-------->
ATHB1
------>
ZmHOX2a(2)
<------------
ATHB5
<--------
ATHB1
<-----------
ARR10
--------->
YAB1
--------->
AGP1
--------->
ATHB12
<------
ZmHOX2a(2)
--------->
DAG2
<---------
ICU4
<---------
AGP1
---------->
DOF2
--------->
ATHB51
--------->
CCA1(2)
--------->
TOE2(3)
--------->
ICU4
--------->
ARR11(3)
--------->
REM1(1)
--------->
YAB1
<---------
ATHB12
<---------
ARR11(3)
------->
TEIL
--------->
ANAC46
<---------
TOE2(3)
<---------
ATHB51
<---------
ARR14(2)
----->
MYC3
<------
ZmHOX2a(2)
<---------
YAB1
<---------
HSFB2a(2)
--------->
ARR14(2)
---
------
MYC3
--------->
ARR14(2)
--------->
YAB1
--------->
HSFB2a(2)
---------->
DOF2
<--
acatgaatttgaatcgatccactacatcatccatacaattaacataaaaaagttctaaaaaatcaataattgaaaaaagaagatctaatgaaaaaaaaaa
14146600
---------->
DOF2
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
----
<---------
AHL20(2)
----------->
GT1
<---
--------->
AHL20(1)
---------->
DOF2
<---------
ZAT6
<---
--------->
YAB1
--------->
AHL20(2)
----------->
GT1
--------->
AHL20(2)
<---------
ICU4
<---------
TOE2(3)
<---------
AHL20(2)
--------->
AHL20(2)
----------->
GT1
--------->
YAB1
------>
TOE2(3)
--------->
AHL20(2)
----------->
GT1
--------->
DAG2
----------->
GT1
--------
DOF2
--------->
AHL20(2)
---------->
DOF2
---------->
DOF2
--------->
ALFIN1
-------
ctttaatgaaaataaaataaattaataaagaataaagaaagaaaatagtgaaaatagaaaaagtaaatagtagaagaaaatgggggagttaataatgtgg
14146700
<----------
DOF2
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
------>
NtERF2
------>
MYB83
----->
ZAT18
----------->
RAV1(1)
------>
MYB46(1)
------
PCF2
<----------
DOF2
<---------
ICU4
------
ZAT18
--------->
At5g28300
<---------
DAG2
--------->
ZAT6
<---------
YAB1
-->
ALFIN1
----------->
GT1
------>
ZmHOX2a(1)
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
gcactagtctctgaaacagtaacttctactactaaaaactcctgctttttcgccaacaagtagccatcactaccttccttttgattccctctctctctct
14146800
--------->
ZAT14
<---------
ZAT18
<---------
At4g35610
--------->
At4g35610
--------->
ZAT2
<---------
ZAT2
<---------
ALFIN1
--------->
MYB46(3)
--------->
ANAC46
--------->
MYB46(3)
--------->
ZAT18
<---------
ZAT18
----
--------->
PCF2
<----------
DOF2
-------
<---------
ANAC58
<---------
ALFIN1
----------->
HVH21
-------
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
CCA1(2)
-------
=================================
HOX2a_HOX2a
--------->
TOE2(3)
---------->
DOF2
<---------
ANAC58
------>
ZmHOX2a(1)
--------->
TOE1(3)
*
TSS
----------->
GT1
-----
cgatcgtgcccaccagctcactcaccctcctaaatccacactttaaactaaaaaaccctaaatctcgagcctt
gacacaagagagaaaaaagaaacacac
14146900
<------
NtERF2
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
--------->
TCP16(2)
--------->
ANAC46
--------->
TCP15(1)
--------->
ANAC58
--------->
TCP20
--------->
ANAC58
<---------
TCP16(1)
<---------
ALFIN1
<---------
ARR14(2)
--------->
ZAT14
<---------
PCF5
<---------
ALFIN1
<---------
PCF2
<-----------
HVH21
--------->
ALFIN1
------>
ZmHOX2a(1)
=====================================
bZIP_DOF
---------->
DOF2
--------------------->
WRI1
--------->
O2
--------->
ANAC46
------->
RAV1(1)
--------->
LBD16
--------->
TOE2(3)
--------->
ANAC55(2)
-->
ANAC58
<------
MYB83
<---------
YAB1
<---------
O2
<---------
ALFIN1
-->
ANAC58
<------
MYB46(1)
<---------
ICU4
<---------
TGA1a
--------->
ANAC58
------
-->
ANAC46
<---------
MYB46(3)
--------->
YAB1
<---------
ANAC55(2)
---------->
DOF2
<-
---->
ANAC46
--------->
ARR14(2)
<-----------
GT1
<---------
ZAT18
<-----------
GT1
--------->
YAB1
<-----
aacacaaagaagtgggtccgcatttgtaagaatcaccattccttagtagtggccatagtcaagtgtcaccacacacacaccaaaaataaagacgttcctt
14147000
<----------
DOF2
------->
TEIL
<----------
DOF2
<---------
ANAC58
<---------
CCA1(2)
<---------
ANAC58
-------->
P
--------
---------->
ID1
<---------
TOE2(3)
------>
MYB46(1)
<---------
HSFB2a(2)
--------------->
WRI1
<---------
DOF5.7(2)
--------->
AtMYB61
--------->
HSFB2a(2)
----------
GT1
--------->
DOF5.7(2)
--------->
MYB46(3)
--------->
HSFC1(1)
-----
DOF2
--------->
ATHB12
<-----------
HVH21
<----------
DOF2
------>
MYB83
<---------
HSFC1(1)
ttttctcttcgtctccattggtacttacttactagtcagacattaacgtgcctttgtgaaaaaccaacccatctctttccctctctctagaaacccagag
14147100
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
--------->
ATHB12
--------->
ATHB51
--------->
At4g35610
<---------
ICU4
<---------
At4g35610
<---------
YAB1
------>
ZmHOX2a(1)
--------->
ICU4
<---------
ANAC58
<----------
DOF2
<---------
WOX13(1)
<---------
ANAC58
<---------
ANAC58
--------->
YAB1
<------
ZmHOX2a(1)
<---------
At4g35610
---------
->
LBD16
<---------
ANAC58
<---------
ATHB12
----------->
GT1
<----------
DOF2
------>
ZmHOX2a(1)
aagaaaactcttgcttccaagcttttcccactcataattgcttattagaaggagaaattttgcttcttttcctctgcttcctcttaacatagaagaaatt
14147200
--------->
ANAC58
===============================
HOX2a_HOX2a
------>
ZmHOX2a(2)
--------->
ANAC58
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ANAC58
<---------
ANAC55(2)
<---------
ANAC58
<------
MYB83
--------->
ANAC58
<---------
ANAC46
<------
MYB46(1)
--------->
ANAC55(1)
<---------
GLK1(2)
<---------
ANAC58
<---------
WOX13(1)
--------->
ANAC55(2)
--------->
LBD16
<---------
ANAC46
<<<<<<<<<
TBF1
--------->
ATHB12
--------->
ANAC46
--------->
MYB46(3)
<------
ZmHOX2a(1)
<-----------
GT1
--------->
LBD16
<---------
LBD16
================================
HOX2a_HOX2a
<---------
ICU4
<-----------
RAV1(2)
>
ARR11(3)
<---------
ARR11(3)
<---------
AtMYB61
<---------
ATHB12
------>
ZmHOX2a(1)
ggagacacggaaggaagaagatcgcaacaatccagaattggtggaggagattgcttcgatctaatcacttcttcttccatcctccag
gtatagattggtt
14147300
<---------
PCF2
<---------
DEAR3(2)
<---------
ANAC46
<---------
ANAC58
<----------
DOF2
--------->
ICU4
<---------
STY1(2)
<---------
ANAC58
<---------
ARR11(3)
--------->
STY1(2)
<---------
WOX13(1)
--------->
ARR11(3)
<-----------
GT1
<----------
DOF2
<---------
ANAC58
--------->
GLK1(2)
<-----------
GT1
<---------
ANAC46
<---------
GLK1(2)
--------->
RVE1(1)
<---------
YAB1
<---------
ANAC58
<-----------
GT1
<-------
TEIL
tttaaaaatctgttcttggagttattactagtaactagcttgtgggttcctttttactagattggctttggtacatgaagtgattcagatagagaatttt
14147400
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AGI:
At2g33360.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04490.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04490.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71465.1)
Range:
from: 14146874
to: 14150194
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.