Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                              <-----------GT1                                                   -----                           <---------ARR14(2)   <---------HSFB2a(2)                             <----                           <---------GLK1(2)    --------->HSFB2a(2)                             -----                           <---------GATA12  ------->TEIL                                       -----                           <---------RVE1(2)<---------KAN1             <---------ARR11(1)       -----                           *TSS         <---------ANAC58               --------->RVE1(2)        <----                           --------->ARR11(3)--------->ARR14(2)        --------->ARR14(2)      ------                           --------->ARR14(2)<---------ARR11(2)        <---------ARR11(3)      ------                           --------->GATA12 <---------CCA1(2)         <---------CCA1(2)        ------                           <---------ARR11(3)<---------ARR14(2)--------->ARR11(2)          --------->AHL20(2)                     --------->ZAT18    <---------ANAC46       <---------ARR11(2)       --------->TOE2(3)                ---------->DOF2   <----------DOF2              <---------ARR14(2)       ----------->GT1      ---------->DOF2<---------ZAT14    <---------ANAC58       --------->ARR14(2)      ----------->GT1   attgaagtaaaagctcatcaaagtccacagattttccttttagcgtgtatctcgaactcgaagacgatacccatatctatttctactaaatgttaaaata  13932500                                                                              --------->ZAT2                                                                              --------->At4g35610                                                                          <-----------GT1                                                                      <---------WOX13(2)                                                                      --------->WOX13(2)                                                                     <---------AHL20(2)                                                                     --------->AHL12(3)                                                                     --------->AHL25(2)                                                                     <---------AHL25(3)                                                                     <---------AHL12(2)                                                                     <---------AHL25(1)                                                                    --------->AHL25(1)                                                                    <---------AHL25(1)                                                                    --------->AHL25(3)                                                                    <---------AHL12(3)                                                                    <---------AHL25(2)                                                                    --------->AHL12(1)                                                                    <---------AHL12(1)                                                                    --------->AHL25(2)                                                                    --------->AHL20(2)                                                                    --------->AHL12(3)                                                                    <---------AHL25(3)                                                                    <---------AHL20(2)                                                                    <---------AHL20(1)                                                                   --------->AHL12(3)                                                                   <---------AHL20(2)                                             --------->TOE1(3)     <---------AHL12(3)                                             --------->TOE2(3)     <---------AHL25(2)                                         <---------AHL25(3)        --------->AHL20(3)                                         <---------AHL20(2)        --------->AHL25(3)                                         <---------AHL25(1)        <---------AHL20(3)                                         --------->AHL20(2)        <---------AHL25(1)                                         --------->AHL25(1)       <---------AHL12(2)                                        <---------AHL12(2)        <---------WOX13(2)                                       --------->WOX13(2)         --------->WOX13(2)                                     <---------AHL25(3)           --------->AHL12(2)                                     <---------AHL20(3)          <---------AHL12(2)                                     --------->AHL25(1)         --------->AHL20(2)                                     --------->AHL12(3)         --------->AHL20(3)                                     <---------AHL20(2)         <---------AHL20(2)                                     --------->AHL20(3)         --------->AHL25(1)                                     --------->AHL20(2)         <---------AHL20(1)                                     <---------AHL12(3)         --------->AHL20(1)                                     --------->AHL25(2)         <---------AHL20(3)                                    --------->AHL25(2)          <---------AHL25(1)                                    --------->AHL20(1)          <---------AHL25(2)      --------->TOE2(3)             <---------AHL25(3)          <---------AHL12(1)      --------->YAB5                <---------AHL25(2)          <---------AHL25(3) -------->LBD16                     <---------AHL20(1)          --------->AHL25(3) ---->ARR11(2)                      <---------AHL20(2)          --------->AHL25(2) -----ARR14(2)                      --------->AHL20(2)          --------->AHL12(1) ---->ARR11(3)                      --------->AHL25(1)         --------->AHL25(3)               ----- ---->ARR14(2)                      <---------AHL25(1)        <---------AHL12(2)                ----- ---->RVE1(2)       ----------->RAV1(1)<---------WOX13(2)     --------->AHL12(2) --------->At5g28300- -----ARR11(3)    --------->ZAT18   --------->AHL25(3)       --------->YAB1   <---------At4g35610   < --->RVE1(1)  --------->DOF5.7(1)   --------->AHL12(3)      --------->AHL20(2)<---------ZAT2    ----- --->KAN1  <---------YAB1           <---------AHL12(3)------->GAMYB--------->AHL20(2)         ------- --->CCA1(1) ---------->DOF2     --------->YAB1   --------->MYB46(3)--------->AHL20(1)       <-------   tccccaaacgtttataaaagtgcaacatagcccaaaaataaaattaaacttaacaacagcaaataataaattaatttcacagctgtaacttgagaataac  13932600                                --------->ARR11(2)                      =====================HOX2a_HOX2a                     ======================HOX2a_HOX2a                     <------ZmHOX2a(2)                     --------->CCA1(2)                    <---------GATA12           ----------->RAV1(1)  <---------ARR14(2)        --------->ANAC58        --------->ARR14(2)    --------->WOX13(2)===================================HOX2a_HOX2a    <---------WOX13(2)------>ZmHOX2a(2)                        --------->ARR11(3)    <---------TOE2(3)====================================HOX2a_HOX2a  <---------AHL20(2)--------->GATA12<---------YAB1           <---------YAB5  --------->AHL20(2)<-----------ARR10         --------->ARR14(2)  --------->AHL25(1)<---------ARR14(2)        <---------ARR14(2) --------->ICU4     --------->ARR11(3)        --------->ARR11(3) <---------ATHB12   <---------ARR11(3)        --------->RVE1(2)<---------RVE1(2) ---->ANAC58        --------->ARR14(2)        <---------ARR11(3) ---->ANAC46        --------->AGP1  ------>ZmHOX2a(1)    <---------RVE1(2) -------->WOX13(2)  <---------AGP1 --------->TOE2(3)     <---------GLK1(2)           <---------ANAC58 ---------WOX13(2)  --------->RVE1(2)<---------ICU4     <---------At4g35610          <---------ANAC58 ---->ANAC58 --------->REM1(1)  <---------ARR11(2)  <-----------HVH21         --------->DAG2 -->MYB52(1) --------->MYB46(3) ------->TEIL --------->KAN1  <---------YAB1  ---------->DOF2 --KAN1 --------->ANAC58       <---------CCA1(2)  ------>ZmHOX2a(1)        <---------RVE1(2)  -------   gcaattaatgaagcaacaacaagatctatgtgtgtatccttattgcaatatcctggtcagattatgattttgttttggataaagtttccttggctcaaaa  13932700                                                   --------->RVE1(2)                                                <---------AHL12(2)                                 --                                               <---------AHL20(2)                       ---------->DOF2                                 <---------------AtSPL3                             --------->RVE1(2)                                 <---------------AtSPL8                            <---------GLK1(1)                         ---------->DOF2      --------->AHL20(2)                   --------->GLK1(1)                 <----------DOF2 --------->HSFB2a(2)                               --------->KAN1<---                 <---------DOF5.7(1) <---------TOE1(2)                            <---------RVE1(2)<- --->DOF2     <-----------GT1    <---------HSFB2a(2)                     ------>ZmHOX2a(1)     <-----   gtaaacttccttctatttccttttctctaaagtttctagtacgttctatataatatccaatacctctctaacttcctattttgtgatatccaaagttctg  13932800                                                                                                <----                                                                                                =====                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----             ------->GAMYB                                                                     ------            --------->MYB46(3)                                                                 <-----       --------->TOE2(3)                >>>>>>>>>TBF1                                          <-----       --------->TOE1(3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   ------      --------->ZAT6                 >>>>>>>>>TBF1  >>>>>>>>>TBF1                              <-----    <-----------GT1               >>>>>>>>>TBF1  >>>>>>>>>TBF1                                 ------ <---------AHL12(2)            >>>>>>>>>TBF1  >>>>>>>>>TBF1                                    <----- ------->AHL12(1)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------YAB1  ------->GAMYB---- ------RVE1(2) <------ZmHOX2a(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<------------CBF        *TSS --------AHL12(1)  <---------ALFIN1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------YAB1     -------- ----YAB1 --------->MYB52(1)>>>>>>>>>TBF1  >>>>>>>>>TBF1--------->DOF5.7(1)      ----------->RAV1(1)<   attttttaaccctaacgatcaacacttgaagaagaagaagaagaagaagaagaagaagaagatggtgatgaagattgcgatagcaacagagagaacagat  13932900        <------MYB83        <------MYB46(1)       --------->MYB59       --------->MYB46(2)      <---------MYB55(1)     <---------MYB52(1)  ------>ZmHOX2a(1) --------------->AGL15 --ZmHOX2a(2) ========HOX2a_HOX2a --->ARR14(3) ------ARR10 ----GLK1(2) --->AGP1 ----ARR14(3) --->ARR11(2) ----ARR11(2) --->ARR11(3) ----RVE1(2) ----GATA12 --->GATA12 ----ARR14(2)                     --------->WOX13(2)              <----------DOF2 --->ARR14(2)             <---------RVE1(2)                      <---------ANAC46 ----ARR11(3)        --------->WOX13(2)                          <---------ANAC58 -->ZmHOX2a(2)       <---------WOX13(2)      --------->YAB5      <---------ANAC58                 <-- --->ARR10 --------->ARR11(2)    --------->KAN1 <---------At4g35610   <---------RVE1(2)          ---- -----------------AGL1 --------->YAB1       <---------KAN1 ------->TEIL         <---------RVE1(2)----   cttcctcgtttggtatctactgcaattagagcttctaattcgcagaatgcttctgatgttgaacgttgctttgatgttcttcgatacttgaagggtttga  13933000                                                                                           --------->ANAC58                                                                                           <---------ANAC55(2)                                                                                           <---------TGA1a                                                                                           --------->ANAC55(2)                                                                                           --------->TGA1a                                                                                           --------->ANAC58                                                                                      <---------At4g35610                                                                            <-----------------------TaNAC69(2)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                          --------->ARR11(2)                                                                          --------->ARR11(1)                                                                          <---------ARR11(2)                                                                          <---------RVE1(2)==========                                                             <---------ANAC55(2)      --------->At4g35610            --------->ARR11(3)                               --------->ANAC58    --------->ANAC58            <-----------ARR10                                --------->ANAC46    --------->ANAC58       <<<<<<<<<WRKY18                                       --------->ANAC58  --------->MYB52(1)     <-----------HVH21                                    <------ZmHOX2a(2) <-------TEIL   --------->O2 -------KAN1<---------ARR11(3)                           --------->ARR11(3)--------->CCA1(2) --->TEIL   --------->GLK1(2)   <---------RVE1(2)        <---------ARR11(3)--------->ARR14(1)      <- ----->GATA12             ---------->DOF2       --------->GLK1(2)       ----------->ARR10  <---------O2   atctctctgtcaaaaatctttcccattccaaagtgatacttcccttggagagtctgagagatcacgaaaaccctaagatacgaacggaagctcacgtctt  13933100                                                                       ----------->HVH21                                                                      --------->LBD16                                                                     ----------->RAV1(2)                                                                     <---------LBD16                                                                ------>MYB46(1)                                ------>NtERF2                   ------>MYB83                               <---------ZAT18                <---------MYB59                             --------->At4g35610              --------->TOE2(3)                <-----                             <---------At4g35610          ------->GAMYB--------->LBD16         <-----                      <-----------GT1                    <---------MYB52(2)                    <-----                   <---------DOF5.7(1)                   --------->MYB46(3)                ---------- ============================bZIP_DOF                  ----------->RAV1(1)        ---------->DOF2---- --------ZAT18    <----------DOF2                      ==========================RAV   ----------->GT1   gttcacttcatggatgaagactttttactccagcggacaaaactcttcttctacttgcaacaaacctaatcccctgaaactgaagaaagttgttaaagcg  13933200 ----ANAC58 ----ANAC46                                                      --------->DOF5.7(1) ----ANAC58                                  <---------LBD16   ---------->DOF2 >DOF2      >>>>>>>>>TBF1       --------->RVE1(2)      <---------TOE2(3)                  >>>>>>>>>TBF1 ----->ALFIN1  >>>>>>>>>TBF1  <---------MYB52(2)       <---------TOE1(3)        <---------LBD16   tgttcggagttgaagaagaagaacgaagagcaactatctcatggttttgcggtacttaaggctaagaaagagactgtttttttggggatgaagaagaacg  13933300                <-------TEIL         ------>ZmHOX2a(2)        <------ZmHOX2a(2)        --------->CCA1(2)       --------->GATA12       <---------ARR11(3)       >>>>>>>>>GATA-2       --------->AGP1       --------->ARR11(3)       >>>>>>>>>GATA-1       >>>>>>>>>GATA-3                                                                    --------->ANAC58       >>>>>>>>>GATA-4                                             --------->YAB1     >>>>>>>>>TBF1       <---------GATA12                        --------->KAN1     --------->ICU4<---------HSFB2a(2)       <---------RVE1(2)       --------->At4g35610             <---------AtLEC2 --------->HSFB2a(2)      --------->GLK1(1)        --------->CCA1(2)          <----------DOF2<------ZmHOX2a(1)--------->ANAC58   aagatgagagatctagggttcatgaaaccagagagatgaaacaaattggtgattccaagtcttttgcattgatgaggactatcgagaagaagaagcaatc  13933400  Previous    Next  AGI:  At2g32810.1    Description:  BGAL9 (BETA GALACTOSIDASE 9); beta-galactosidase. Identical to Beta-galactosidase 9 precursor (BGAL9) [Arabidopsis Thaliana] (GB:Q9SCV3;GB:O48836); similar to BGAL8 (BETA-GALACTOSIDASE 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.1); similar to putative beta-galactosidase [Glycine max] (GB:AAQ62586.1); similar to beta-D-galactosidase [Pyrus pyrifolia] (GB:BAD91079.1); similar to pear beta-galactosidase3 [Pyrus communis] (G Range:  from: 13926204    to: 13932427    Orientation: Reverse Links:  TAIR  MIPS  AIP    AGI:  At2g32820.1    Description:  DNA binding / protein binding / transcription regulator. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G33090.1); similar to hypothetical protein 27.t00083 [Brassica oleracea] (GB:ABD65077.1); contains InterPro domain Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal; (InterPro:IPR010990); contains InterPro domain Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type; (InterPro:IPR003617) Range:  from: 13932894    to: 13934056    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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