Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                              <-----------GT1   <---------HSFB2a(2)                             <----                           *TSS         <---------ANAC58                                        -----                           <---------ARR14(2)   --------->HSFB2a(2)                             <----                           <---------GLK1(2)<---------CCA1(2)                                   -----                           --------->ARR11(3)------->TEIL              <---------ARR11(3)      ------                           --------->ARR14(2)<---------ARR14(2)        --------->ARR14(2)      ------                           <---------ARR11(3)--------->ARR14(2)        <---------ARR11(1)  --------->AHL20(2)                     <---------ZAT14    <---------ANAC46              <---------CCA1(2) ----------->GT1                ---------->DOF2   <----------DOF2              <---------ARR14(2)       --------->TOE2(3)      ---------->DOF2--------->ZAT18    <---------ANAC58       --------->ARR14(2)      ----------->GT1   attgaagtaaaagctcatcaaagtccacagattttccttttagcgtgtatctcgaactcgaagacgatacccatatctatttctactaaatgttaaaata  13932500                                                                                 --------->At5g28300                                                                              <---------ZAT2                                                                              <---------At4g35610                                                                          <-----------GT1                                                                     <---------AHL20(2)                                                                    --------->AHL20(2)                                             --------->TOE2(3)      <---------AHL20(2)                                             --------->TOE1(3)      <---------AHL20(1)           <---------YAB1                <---------AHL20(2)        <---------AHL20(2)      --------->TOE2(3)              <---------AHL20(2)         <---------AHL20(2) -------->LBD16                      --------->AHL20(2)         --------->AHL20(2) -----ARR14(2)                      --------->AHL20(2)          <---------AHL20(1) ---->ARR11(3)                      <---------AHL20(2)          --------->AHL20(1)              ----- -----ARR11(3)                      --------->AHL20(1)       --------->YAB1   --------->At4g35610 ---->ARR14(2)      ----------->RAV1(1)  --------->AHL20(2) --------->AHL20(2)--------->ZAT2    ----- --->CCA1(1)      --------->ZAT18   <---------AHL20(1)------->GAMYB--------->AHL20(2)           ----- --->RVE1(1) ---------->DOF2     --------->YAB1   --------->MYB46(3)--------->AHL20(1)        -------   tccccaaacgtttataaaagtgcaacatagcccaaaaataaaattaaacttaacaacagcaaataataaattaatttcacagctgtaacttgagaataac  13932600                      ===================================HOX2a_HOX2a                      ------>ZmHOX2a(2)                      =====================HOX2a_HOX2a                     ====================================HOX2a_HOX2a                     --------->CCA1(2)                     ======================HOX2a_HOX2a                    <---------AGP1  ------>ZmHOX2a(1)           ----------->RAV1(1)      <---------YAB1        --------->ANAC58        --------->ARR14(2)        --------->ANAC58        <---------ARR14(2)             --------->ARR11(3)    <---------TOE2(3)<------ZmHOX2a(2)                       <---------YAB1  <---------AHL20(2)--------->ARR14(2)                   <---------GLK1(2)  --------->AHL20(2)--------->AGP1 --------->TOE2(3)    <---------At4g35610 <---------ATHB12   <---------ARR14(2)        <---------ARR14(2) --------->ICU4     <---------ARR11(3)        --------->ARR14(2) ---->ANAC46        <-----------ARR10<---------ICU4 <-----------HVH21                <---------ANAC58 ---->ANAC58        --------->ARR11(3)        --------->ARR11(3)                     <---------ANAC58 ---->ANAC58 --------->MYB46(3) ------->TEIL  <---------ARR11(3)              --------->DAG2 -->MYB52(1) --------->REM1(1) <---------CCA1(2)  ------>ZmHOX2a(1)          ---------->DOF2  -------   gcaattaatgaagcaacaacaagatctatgtgtgtatccttattgcaatatcctggtcagattatgattttgttttggataaagtttccttggctcaaaa  13932700                                               <---------AHL20(2)                                     <---------TOE1(2)                                 <---------------AtSPL8                                 <---------------AtSPL3                                 ---------->DOF2                         ---------->DOF2      --------->AHL20(2)                   --------->GLK1(1)                 <----------DOF2 <---------HSFB2a(2)                               <---------GLK1(1) --->DOF2     <-----------GT1    --------->HSFB2a(2)                     ------>ZmHOX2a(1)     <-----   gtaaacttccttctatttccttttctctaaagtttctagtacgttctatataatatccaatacctctctaacttcctattttgtgatatccaaagttctg  13932800                                                                                                =====                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                        >>>>>>>>>TBF1                                          <-----               <------ZmHOX2a(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   <-----             ------->GAMYB           >>>>>>>>>TBF1  >>>>>>>>>TBF1                              ------            --------->MYB46(3)    >>>>>>>>>TBF1  >>>>>>>>>TBF1                                 ------       --------->TOE2(3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         ------       --------->TOE1(3)       >>>>>>>>>TBF1  >>>>>>>>>TBF1                      ----------->RAV1(1)      --------->ZAT6          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <------------CBF        *TSS  <    <-----------GT1<---------ALFIN1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------YAB1     -------- ----YAB1 --------->MYB52(1)>>>>>>>>>TBF1  >>>>>>>>>TBF1            <---------YAB1  ------->GAMYB----   attttttaaccctaacgatcaacacttgaagaagaagaagaagaagaagaagaagaagaagatggtgatgaagattgcgatagcaacagagagaacagat  13932900        <------MYB83        <------MYB46(1)       --------->MYB59       --------->MYB46(2)      <---------MYB55(1)     <---------MYB52(1)  ------>ZmHOX2a(1) --------------->AGL15 ========HOX2a_HOX2a --ZmHOX2a(2) ------ARR10 ----ARR14(3) --->ARR11(3) ----GLK1(2) ----ARR14(2) ----ARR11(3) --->ARR14(2)                                                     <----------DOF2 --->ARR14(3)                                                    <---------ANAC58 --->AGP1                                                        <---------ANAC58 -----------------AGL1                                           <---------ANAC46 --->ARR10                                                 ------->TEIL -->ZmHOX2a(2)         --------->YAB1           <---------At4g35610                              ----   cttcctcgtttggtatctactgcaattagagcttctaattcgcagaatgcttctgatgttgaacgttgctttgatgttcttcgatacttgaagggtttga  13933000                                                                                           --------->ANAC58                                                                                           --------->ANAC55(2)                                                                                           --------->TGA1a                                                                                           <---------TGA1a                                                                                           <---------ANAC55(2)                                                                                           ==========                                                                                           --------->ANAC58                                                                                      --------->At4g35610                                                                            <-------TEIL   --------->O2                                                                          --------->ARR11(1)                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                             --------->ANAC58         <---------At4g35610                                                             --------->ANAC58    --------->ANAC58            --------->ARR11(3)                               --------->ANAC46  --------->MYB52(1)            --------->GLK1(2)                                <---------ANAC55(2) --------->ANAC58            <---------ARR11(3)                            <------ZmHOX2a(2) <-----------------------TaNAC69(2)       <<<<<<<<<WRKY18                                   <---------ARR11(3)--------->ARR14(1)     <-----------HVH21    ---------->DOF2                --------->ARR11(3)--------->CCA1(2)       <- --->TEIL   <-----------ARR10                   --------->GLK1(2)       ----------->ARR10  <---------O2   atctctctgtcaaaaatctttcccattccaaagtgatacttcccttggagagtctgagagatcacgaaaaccctaagatacgaacggaagctcacgtctt  13933100                                                                       --------->LBD16                                                                      --------->LBD16                                                                     ----------->RAV1(2)                                                                     <---------LBD16                                                                ------>MYB83                                                                ------>MYB46(1)                                ------>NtERF2                 --------->TOE2(3)                               <---------ZAT18                <---------MYB59                  <-----                             <---------At4g35610          ------->GAMYB----------->HVH21       <-----                             --------->At4g35610         --------->MYB46(3)                    <-----                      <-----------GT1                    <---------MYB52(2)                ---------- ============================bZIP_DOF                  ----------->RAV1(1)        ---------->DOF2---- --------ZAT18    <----------DOF2                      ==========================RAV   ----------->GT1   gttcacttcatggatgaagactttttactccagcggacaaaactcttcttctacttgcaacaaacctaatcccctgaaactgaagaaagttgttaaagcg  13933200 ----ANAC58 ----ANAC46 ----ANAC58                                            <---------TOE2(3) >DOF2      >>>>>>>>>TBF1                    <---------LBD16   ---------->DOF2            >>>>>>>>>TBF1 ----->ALFIN1  >>>>>>>>>TBF1  <---------MYB52(2)       <---------TOE1(3)        <---------LBD16   tgttcggagttgaagaagaagaacgaagagcaactatctcatggttttgcggtacttaaggctaagaaagagactgtttttttggggatgaagaagaacg  13933300                <-------TEIL         ------>ZmHOX2a(2)        --------->CCA1(2)        <------ZmHOX2a(2)       --------->ARR11(3)       >>>>>>>>>GATA-3       >>>>>>>>>GATA-4       >>>>>>>>>GATA-1                                                                    --------->ANAC58       <---------ARR11(3)                                          --------->YAB1     >>>>>>>>>TBF1       >>>>>>>>>GATA-2                                            --------->ICU4--------->HSFB2a(2)       --------->AGP1          --------->At4g35610             <---------AtLEC2 <---------HSFB2a(2)      --------->GLK1(1)        --------->CCA1(2)          <----------DOF2<------ZmHOX2a(1)--------->ANAC58   aagatgagagatctagggttcatgaaaccagagagatgaaacaaattggtgattccaagtcttttgcattgatgaggactatcgagaagaagaagcaatc  13933400  Previous    Next  AGI:  At2g32810.1    Description:  BGAL9 (BETA GALACTOSIDASE 9); beta-galactosidase. Identical to Beta-galactosidase 9 precursor (BGAL9) [Arabidopsis Thaliana] (GB:Q9SCV3;GB:O48836); similar to BGAL8 (BETA-GALACTOSIDASE 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL3 (beta-galactosidase 3), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G36360.1); similar to putative beta-galactosidase [Glycine max] (GB:AAQ62586.1); similar to beta-D-galactosidase [Pyrus pyrifolia] (GB:BAD91079.1); similar to pear beta-galactosidase3 [Pyrus communis] (G Range:  from: 13926204    to: 13932427    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32820.1    Description:  DNA binding / protein binding / transcription regulator. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G33090.1); similar to hypothetical protein 27.t00083 [Brassica oleracea] (GB:ABD65077.1); contains InterPro domain Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal; (InterPro:IPR010990); contains InterPro domain Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type; (InterPro:IPR003617) Range:  from: 13932894    to: 13934056    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.