Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------YAB1                                                         --------->ZAT6   <-----------GT1                                       <-----------GT1 ------->YAB1                                           <---------YAB1 -------YAB1                                        <---------GLK1(2) ---->YAB1                                          <---------ARR11(3) ----YAB1                       <-----------HVH21 <---------YAB1                                ----- >ICU4             <----------DOF2                --------->ICU4         <-----------HVH21 <-------TEIL   ataataaacctcttcaactagctttgttcttccatgtcaaaactcttaagtcaagattatcactattcactaatgtgtcagagagccatcagattcaaaa  13197000                                       <------NtERF2                                      ------>NtERF2                                      <---------RAP2.6(3)                                     --------->DEAR3(1)                                   --------->At4g35610                                   <---------At4g35610     --------->HSFC1(2)                      --------->DAG2 --------->RAP2.6(2)   <---------HSFC1(2)                     ---------->DOF2 --------->RAP2.3(2)  --------->ANAC58            --------->ANAC46         ---------->DOF2       <----------DOF2            --------->ANAC58            ----------->RAV1(1) ------------------->ANAC81<----------DOF2            <-----------GT1              --------->ANAC46   tccaaaaacttgaaagagagagataaagtctttctttagccgccttgatggaattttcacaagcttcttagaaaacttatctaaaaccccacaatagtta  13197100                                                             --------->ARR11(3)                                                             --------->AHL20(1)                                                          >>>>>>>>>>GT-3b                                                       ----------->GT1                                                     ---------->DOF2                            -----                                                  --------->ANAC58                          ---------                                                  --------->ANAC58                 <----------DOF2---                           <---------ARR14(2)     --------->ANAC46<---------AHL20(2)       <---------ATHB12                           --------->ARR14(2)    ------->TEIL<---------AHL20(1) <-----------GT1 <----                   <-------TEIL              <---------------AtSPL8    <---------AHL20(2)--------->WOX13(1)   agaacacagaagaaatacagattcaaatgtatacgcgtgagaacatttatgtacgcaaagaaaaatattgaatttttttttttttcttttccaatcaaaa  13197200                      --------->ARR14(2)                      <---------ARR14(2)                   <---------ANAC55(1)                   <---------ANAC55(2)                   --------->ANAC55(1)                   --------->ANAC55(2)                  <-------TEIL                                                                    ---                 --------->CCA1(2)                                                                <--                --------->ARR14(2)                                                                <--          <---------REM1(2)   <---------YAB1                                     <---------At4g35610        --------->ARR14(2)    --------->ICU4                                     --------->ZAT2  ---- ---->GLK1(2)   <---------GLK1(2)                                     ----------->GT1   <---------GLK1(2) >YAB1  --------->ZAT14 --------------->AtSPL3                       ----------->GT1  <---------YAB1 ------>TOE2(3) --------->ARR11(1)       --------->YAB1--------->At4g35610       <---------ZAT2  <--- -----ARR11(3)  <---------ARR14(2)  <---------ANAC46--------->At4g35610          --------->At4g35610   tctaaatctgtatacacagatacgtattcgtacttattgtgtataagaattagaagcagaagaacatagaattggaaaaaaccagctcaagattgtgttt  13197300   ---------->DOF2                                          *TSS  <-------TEIL ------------>AGL15                                      --------->CCA1(2) -------------AGL15                                     <---------ARR11(3) --------DOF2----------->GT1         <----------ID1     --------->ARR11(3)                    ------- ------------->AGL3          --------->At4g35610   --------->ANAC46                   ----------->GT1 --------------AGL3       <------ZmHOX2a(1)     <---------REM1(2)--------->CCA1(2)  <------ZmHOX2a(1)   cttttaaaagaaacagagtaaaaatagaggaagatgaagaagacgaactatacacacagatatatagatacacatatacagagagaggaagtgaaatacc  13197400                    --------->ARR14(2)          --------->LBD16         <---------LBD16        <---------LBD16        --------->TOE1(2)                                                  <------MYB83     ---------->DOF2<---------ARR14(2)                                     <------MYB46(1)    --------->ARR14(2)                                    --------->YAB1   ----------->GT1    <---------ARR14(2)    ---------->DOF2            --------->AHL20(2) <------ZmHOX2a(1) -->MYB52(1) <------------CBF                   ----------->GT1--------->ICU4   agtgagaaaacgcgggattgcagatagagaaagaagaagagattagagaagagaaaaaaatagtaatgaagagaggaaggtgaaaacgaatatatgtgag  13197500                                                                                              <------                                                                                              -------                                                                                              -------                                                                                             --------                                           --------->ATHB12                                  <-------                                       --------->ICU4                                        --------                                   <-----------TGA1                                   ----------->GT1                                  <---------ANAC46                           <---------AHL20(2)                                 <------NtERF2       <----------DOF2 --------->AHL20(2)      <-------             ------>ZmHOX2a(1) <---------DEAR3(1)---------->ID1 <---------AHL20(2)--------->ATHB12     <---------GLK1(2)   <----------DOF2  <---------YAB1 <----------DOF2    --------->AHL20(2)<------   gttgtcatattcttcctacttcgttctctttaggctgcgtcattttgatttgtccctttctttgattttttttatatataaaattgattagtgaaataat  13197600                                                     <-----------GT1                                                   <---------AHL20(2)                                 <---------------AGL15                                 --------------->AGL15                                ----------------->AGL2                                <-----------------AGL2   --------->YAB1               <-----------------AGL3  <---------YAB1    <---------AHL20(2)         <---------AHL20(2) ---ICU4           --------->AHL20(2)          --------->AHL20(2)                     <----------DOF2 -->ATHB51         <---------AHL20(2)         --------->AHL20(2)                     <---------DAG2 ->HAHB4          ================================MADS_MADS                         <---------ANAC58 ->ICU4           <---------------AGL15       <---------AHL20(2)           --------->ANAC46 --ATHB51         <---------WOX13(1)    ----------->GT1    <----------DOF2 --------->ZAT6 ->AHL20(2)    <---------YAB1   <-----------------AG<------------------------ANAC81 <---------ANAC58 --AHL20(2)------->TEIL       --------->ICU4  <---------AHL20(1)        <---------ZAT18 --ATHB1  <---------AtLEC2    <---------YAB1  --------->AHL20(1)     <---------MYB46(3)    ------>ZmHOX2a(1)   tgtttttataatgcatgttgattaatttagtaatgcttaaaatggaaatttattttttcttctttttttgtttgttcacactagttgcctttccttatgt  13197700                                                       --------->YAB1                                                     <---------YAB1                                                    --------->TOE2(3)                               -                                                   --------->YAB1                                   -                            <-------TEIL           <--------HAHB4                                   <                         <---------ANAC58          <---------ICU4                                  <-             <---------AHL20(2)                    --------->ATHB12                    <---------AHL20(2)            --------->AHL20(2)                    <---------ATHB12                     --------->AHL20(2)            <---------AHL20(2)               --------->ANAC55(2)                   --------->AHL20(2)            <---------AHL20(1)       ------->MYC3 --------->ICU4             --------->AtLEC2      <-      --------->YAB1     <---------ANAC58<----------DOF2                     --------->ANAC58      --   --------->YAB1   <----------DOF2  <-------MYC3 <---------YAB1             --------->ANAC58      --   ctctatcaacataattttttttcttttacgtccatttcatgtgcttcatgtaatcattaatagggagaatgtagtaggcatgcaaatatttatatgtcga  13197800            --------->AHL20(2)   --------->AHL20(2)                                     <---------AHL20(2)   <---------AHL20(2)                                    <---------WOX13(1) -------->AHL20(1)                                     --------->ATHB12 -------->AHL20(2)                                     --------->YAB1 ---------AHL20(2)                            <---------ARR11(3)                           --------->CCA1(2) --------ATHB51                               --------->ARR11(3)                         --------->YAB1 --------AHL20(2)                       <---------AHL20(2)--------->AHL20(2)           <---------WOX13(1) ------->AHL20(2)        --------->WOX13(1)   <---------GLK1(2)                     <---------ATHB12 ------->ICU4<---------AHL20(2)  ----------->GT1      <---------YAB1                <---------YAB1   aataatttaagacattaaatagtataccaattagttggaaaatttatagattttctatgattaattaagaacagttgctaaaaacaatgaatgatatgga  13197900  Previous    Next  AGI:  At2g30990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81695.1); contains InterPro domain Protein of unknown function DUF688 (InterPro:IPR007789) Range:  from: 13194660    to: 13197360    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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