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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
--------->
ZAT6
<-----------
GT1
<-----------
GT1
------->
YAB1
<---------
YAB1
-------
YAB1
<---------
GLK1(2)
---->
YAB1
<---------
ARR11(3)
----
YAB1
<-----------
HVH21
<---------
YAB1
-----
>
ICU4
<----------
DOF2
--------->
ICU4
<-----------
HVH21
<-------
TEIL
ataataaacctcttcaactagctttgttcttccatgtcaaaactcttaagtcaagattatcactattcactaatgtgtcagagagccatcagattcaaaa
13197000
<------
NtERF2
------>
NtERF2
<---------
RAP2.6(3)
--------->
DEAR3(1)
--------->
At4g35610
<---------
At4g35610
--------->
HSFC1(2)
--------->
DAG2
--------->
RAP2.6(2)
<---------
HSFC1(2)
---------->
DOF2
--------->
RAP2.3(2)
--------->
ANAC58
--------->
ANAC46
---------->
DOF2
<----------
DOF2
--------->
ANAC58
----------->
RAV1(1)
------------------->
ANAC81
<----------
DOF2
<-----------
GT1
--------->
ANAC46
tccaaaaacttgaaagagagagataaagtctttctttagccgccttgatggaattttcacaagcttcttagaaaacttatctaaaaccccacaatagtta
13197100
--------->
ARR11(3)
--------->
AHL20(1)
>>>>>>>>>>
GT-3b
----------->
GT1
---------->
DOF2
-----
--------->
ANAC58
---------
--------->
ANAC58
<----------
DOF2
---
<---------
ARR14(2)
--------->
ANAC46
<---------
AHL20(2)
<---------
ATHB12
--------->
ARR14(2)
------->
TEIL
<---------
AHL20(1)
<-----------
GT1
<----
<-------
TEIL
<---------------
AtSPL8
<---------
AHL20(2)
--------->
WOX13(1)
agaacacagaagaaatacagattcaaatgtatacgcgtgagaacatttatgtacgcaaagaaaaatattgaatttttttttttttcttttccaatcaaaa
13197200
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ANAC55(1)
<---------
ANAC55(2)
--------->
ANAC55(1)
--------->
ANAC55(2)
<-------
TEIL
---
--------->
CCA1(2)
<--
--------->
ARR14(2)
<--
<---------
REM1(2)
<---------
YAB1
<---------
At4g35610
--------->
ARR14(2)
--------->
ICU4
--------->
ZAT2
----
---->
GLK1(2)
<---------
GLK1(2)
----------->
GT1
<---------
GLK1(2)
>
YAB1
--------->
ZAT14
--------------->
AtSPL3
----------->
GT1
<---------
YAB1
------>
TOE2(3)
--------->
ARR11(1)
--------->
YAB1
--------->
At4g35610
<---------
ZAT2
<---
-----
ARR11(3)
<---------
ARR14(2)
<---------
ANAC46
--------->
At4g35610
--------->
At4g35610
tctaaatctgtatacacagatacgtattcgtac
ttattgtgtataagaattagaagcagaagaacatagaattggaaaaaaccagctcaagattgtgttt
13197300
---------->
DOF2
*
TSS
<-------
TEIL
------------>
AGL15
--------->
CCA1(2)
-------------
AGL15
<---------
ARR11(3)
--------
DOF2
----------->
GT1
<----------
ID1
--------->
ARR11(3)
-------
------------->
AGL3
--------->
At4g35610
--------->
ANAC46
----------->
GT1
--------------
AGL3
<------
ZmHOX2a(1)
<---------
REM1(2)
--------->
CCA1(2)
<------
ZmHOX2a(1)
cttttaaaagaaacagagtaaaaatagaggaagatgaagaagacgaactatacacacaga
tatatagatacacatatacagagagaggaagtgaaatacc
13197400
--------->
ARR14(2)
--------->
LBD16
<---------
LBD16
<---------
LBD16
--------->
TOE1(2)
<------
MYB83
---------->
DOF2
<---------
ARR14(2)
<------
MYB46(1)
--------->
ARR14(2)
--------->
YAB1
----------->
GT1
<---------
ARR14(2)
---------->
DOF2
--------->
AHL20(2)
<------
ZmHOX2a(1)
-->
MYB52(1)
<------------
CBF
----------->
GT1
--------->
ICU4
agtgagaaaacgcgggattgcagatagagaaagaagaagagattagagaagagaaaaaaatagtaatgaagagaggaaggtgaaaacgaatatatgtgag
13197500
<------
-------
-------
--------
--------->
ATHB12
<-------
--------->
ICU4
--------
<-----------
TGA1
----------->
GT1
<---------
ANAC46
<---------
AHL20(2)
<------
NtERF2
<----------
DOF2
--------->
AHL20(2)
<-------
------>
ZmHOX2a(1)
<---------
DEAR3(1)
---------->
ID1
<---------
AHL20(2)
--------->
ATHB12
<---------
GLK1(2)
<----------
DOF2
<---------
YAB1
<----------
DOF2
--------->
AHL20(2)
<------
gttgtcatattcttcctacttcgttctctttaggctgcgtcattttgatttgtccctttctttgattttttttatatataaaattgattagtgaaataat
13197600
<-----------
GT1
<---------
AHL20(2)
<---------------
AGL15
--------------->
AGL15
----------------->
AGL2
<-----------------
AGL2
--------->
YAB1
<-----------------
AGL3
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
---
ICU4
--------->
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
-->
ATHB51
<---------
AHL20(2)
--------->
AHL20(2)
<---------
DAG2
->
HAHB4
================================
MADS_MADS
<---------
ANAC58
->
ICU4
<---------------
AGL15
<---------
AHL20(2)
--------->
ANAC46
--
ATHB51
<---------
WOX13(1)
----------->
GT1
<----------
DOF2
--------->
ZAT6
->
AHL20(2)
<---------
YAB1
<-----------------
AG
<------------------------
ANAC81
<---------
ANAC58
--
AHL20(2)
------->
TEIL
--------->
ICU4
<---------
AHL20(1)
<---------
ZAT18
--
ATHB1
<---------
AtLEC2
<---------
YAB1
--------->
AHL20(1)
<---------
MYB46(3)
------>
ZmHOX2a(1)
tgtttttataatgcatgttgattaatttagtaatgcttaaaatggaaatttattttttcttctttttttgtttgttcacactagttgcctttccttatgt
13197700
--------->
YAB1
<---------
YAB1
--------->
TOE2(3)
-
--------->
YAB1
-
<-------
TEIL
<--------
HAHB4
<
<---------
ANAC58
<---------
ICU4
<-
<---------
AHL20(2)
--------->
ATHB12
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ATHB12
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
AHL20(1)
------->
MYC3
--------->
ICU4
--------->
AtLEC2
<-
--------->
YAB1
<---------
ANAC58
<----------
DOF2
--------->
ANAC58
--
--------->
YAB1
<----------
DOF2
<-------
MYC3
<---------
YAB1
--------->
ANAC58
--
ctctatcaacataattttttttcttttacgtccatttcatgtgcttcatgtaatcattaatagggagaatgtagtaggcatgcaaatatttatatgtcga
13197800
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
WOX13(1)
-------->
AHL20(1)
--------->
ATHB12
-------->
AHL20(2)
--------->
YAB1
---------
AHL20(2)
<---------
ARR11(3)
--------->
CCA1(2)
--------
ATHB51
--------->
ARR11(3)
--------->
YAB1
--------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
WOX13(1)
------->
AHL20(2)
--------->
WOX13(1)
<---------
GLK1(2)
<---------
ATHB12
------->
ICU4
<---------
AHL20(2)
----------->
GT1
<---------
YAB1
<---------
YAB1
aataatttaagacattaaatagtataccaattagttggaaaatttatagattttctatgattaattaagaacagttgctaaaaacaatgaatgatatgga
13197900
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AGI:
At2g30990.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81695.1); contains InterPro domain Protein of unknown function DUF688 (InterPro:IPR007789)
Range:
from: 13194660
to: 13197360
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.